RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 FSD2A1L4K1 749 aa16.33■□□□□ 0.21
CSRP1-201ENST00000340006 MARCH8Q5T0T0 291 aa16.33■□□□□ 0.21
CSRP1-201ENST00000340006 CNNM4Q6P4Q7 775 aa16.33■□□□□ 0.21
CSRP1-201ENST00000340006 KIFAP3Q92845 792 aa16.33■□□□□ 0.21
CSRP1-201ENST00000340006 FUCA2Q9BTY2 467 aa16.33■□□□□ 0.21
CSRP1-201ENST00000340006 TSPY26PQ9H489 355 aa16.33■□□□□ 0.21
CSRP1-201ENST00000340006 PARVGQ9HBI0 331 aa16.33■□□□□ 0.21
CSRP1-201ENST00000340006 LARSQ9P2J5 1176 aaKnown RBP16.33■□□□□ 0.21
CSRP1-201ENST00000340006 SCN10AQ9Y5Y9 1956 aa16.33■□□□□ 0.21
CSRP1-201ENST00000340006 TREHO43280 583 aa16.33■□□□□ 0.2
CSRP1-201ENST00000340006 GAS2O43903 313 aaKnown RBP16.33■□□□□ 0.2
CSRP1-201ENST00000340006 C22orf31O95567 290 aa16.33■□□□□ 0.2
CSRP1-201ENST00000340006 CCDC192P0DO97 292 aa16.33■□□□□ 0.2
CSRP1-201ENST00000340006 SARSP49591 514 aaKnown RBP16.33■□□□□ 0.2
CSRP1-201ENST00000340006 ODR4Q5SWX8 454 aa16.33■□□□□ 0.2
CSRP1-201ENST00000340006 IER5Q5VY09 327 aa16.33■□□□□ 0.2
CSRP1-201ENST00000340006 IFT74Q96LB3 600 aa16.33■□□□□ 0.2
CSRP1-201ENST00000340006 POLR3FQ9H1D9 316 aaPredicted RBP16.33■□□□□ 0.2
CSRP1-201ENST00000340006 XPNPEP1Q9NQW7 623 aa16.33■□□□□ 0.2
CSRP1-201ENST00000340006 SUCLA2Q9P2R7 463 aaPredicted RBP16.33■□□□□ 0.2
CSRP1-201ENST00000340006 GTF2IRD1Q9UHL9 959 aa16.33■□□□□ 0.2
CSRP1-201ENST00000340006 NOD1Q9Y239 953 aa16.33■□□□□ 0.2
CSRP1-201ENST00000340006 AKT3Q9Y243 479 aa16.33■□□□□ 0.2
CSRP1-201ENST00000340006 GRIN2DO15399 1336 aa16.33■□□□□ 0.2
CSRP1-201ENST00000340006 KIAA0100Q14667 2235 aaKnown RBP16.33■□□□□ 0.2
CSRP1-201ENST00000340006 CCDC169A6NNP5 214 aa16.32■□□□□ 0.2
CSRP1-201ENST00000340006 KLRC4O43908 158 aa16.32■□□□□ 0.2
CSRP1-201ENST00000340006 CYP2C9P11712 490 aa16.32■□□□□ 0.2
CSRP1-201ENST00000340006 PEX3P56589 373 aa16.32■□□□□ 0.2
CSRP1-201ENST00000340006 COASYQ13057 564 aa16.32■□□□□ 0.2
CSRP1-201ENST00000340006 GDF6Q6KF10 455 aaPredicted RBP16.32■□□□□ 0.2
CSRP1-201ENST00000340006 SPATA20Q8TB22 786 aa16.32■□□□□ 0.2
CSRP1-201ENST00000340006 PRPF31Q8WWY3 499 aaKnown RBP16.32■□□□□ 0.2
CSRP1-201ENST00000340006 MRPL44Q9H9J2 332 aaKnown RBP16.32■□□□□ 0.2
CSRP1-201ENST00000340006 MAN1B1Q9UKM7 699 aa16.32■□□□□ 0.2
CSRP1-201ENST00000340006 A0A0U1RQG5 324 aaPredicted RBP16.31■□□□□ 0.2
CSRP1-201ENST00000340006 GAP43P17677 238 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 DEKP35659 375 aaKnown RBP16.31■□□□□ 0.2
CSRP1-201ENST00000340006 CLCN3P51790 818 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 SMTNP53814 917 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 TYRO3Q06418 890 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 HIC1Q14526 733 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 PTGISQ16647 500 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 NT5DC1Q5TFE4 455 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 RHPN2Q8IUC4 686 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 PSPC1Q8WXF1 523 aaKnown RBP16.31■□□□□ 0.2
CSRP1-201ENST00000340006 HPS3Q969F9 1004 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 FAM49AQ9H0Q0 323 aaPredicted RBP16.31■□□□□ 0.2
CSRP1-201ENST00000340006 SLC39A2Q9NP94 309 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 PCDHA2Q9Y5H9 948 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 IGKV6-21A0A0C4DH24 114 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 ARVCFO00192 962 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 SRGAP2CP0DJJ0 459 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 PLS3P13797 630 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 ATN1P54259 1190 aaPredicted RBP16.31■□□□□ 0.2
CSRP1-201ENST00000340006 PSMD2Q13200 908 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 DRP2Q13474 957 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 MXD4Q14582 209 aaPredicted RBP16.31■□□□□ 0.2
CSRP1-201ENST00000340006 KCNB1Q14721 858 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 SFR1Q86XK3 245 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 FAM178BQ8IXR5 827 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 DAW1Q8N136 415 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 MAP7D2Q96T17 732 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 KCNG1Q9UIX4 513 aa16.31■□□□□ 0.2
CSRP1-201ENST00000340006 RHOBTB3O94955 611 aa16.3■□□□□ 0.2
CSRP1-201ENST00000340006 ARL2P36404 184 aa16.3■□□□□ 0.2
CSRP1-201ENST00000340006 PTPN11Q06124 597 aaPredicted RBP16.3■□□□□ 0.2
CSRP1-201ENST00000340006 MAPK7Q13164 816 aa16.3■□□□□ 0.2
CSRP1-201ENST00000340006 DMP1Q13316 513 aaPredicted RBP16.3■□□□□ 0.2
CSRP1-201ENST00000340006 MKRN4PQ13434 485 aaPredicted RBP16.3■□□□□ 0.2
CSRP1-201ENST00000340006 ANKLE1Q8NAG6 615 aa16.3■□□□□ 0.2
CSRP1-201ENST00000340006 C17orf75Q9HAS0 396 aa16.3■□□□□ 0.2
CSRP1-201ENST00000340006 MBLAC1A4D2B0 266 aaPredicted RBP16.29■□□□□ 0.2
CSRP1-201ENST00000340006 ASAP2O43150 1006 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 ADAM17P78536 824 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 LAMTOR4Q0VGL1 99 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 ZNF658Q5TYW1 1059 aaPredicted RBP16.29■□□□□ 0.2
CSRP1-201ENST00000340006 SESTD1Q86VW0 696 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 KSR1Q8IVT5 923 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 KIAA0319LQ8IZA0 1049 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 DNAJB3Q8WWF6 145 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 PAWRQ96IZ0 340 aaKnown RBP16.29■□□□□ 0.2
CSRP1-201ENST00000340006 KMT5AQ9NQR1 393 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 SEL1LQ9UBV2 794 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 MAPK8IP1Q9UQF2 711 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 SMIM35A0A1B0GVV1 85 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 FRMD3A2A2Y4 597 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 LRRIQ4A6NIV6 560 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 VTNP04004 478 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 CAPN2P17655 700 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 ZNF131P52739 623 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 TMEM62Q0P6H9 643 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 STK4Q13043 487 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 PPP2R5AQ15172 486 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 FAM26FQ5R3K3 315 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 L1TD1Q5T7N2 865 aaKnown RBP16.29■□□□□ 0.2
CSRP1-201ENST00000340006 RUFY4Q6ZNE9 571 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 TRIML1Q8N9V2 468 aa16.29■□□□□ 0.2
CSRP1-201ENST00000340006 DIS3LQ8TF46 1054 aaKnown RBP16.29■□□□□ 0.2
CSRP1-201ENST00000340006 ZNF668Q96K58 619 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms