RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 EARS2Q5JPH6 523 aaKnown RBP13.03□□□□□ -0.32
TREM2-201ENST00000338469 SPPL3Q8TCT6 385 aa13.03□□□□□ -0.32
TREM2-201ENST00000338469 CEP89Q96ST8 783 aa13.03□□□□□ -0.32
TREM2-201ENST00000338469 OSMRQ99650 979 aa13.03□□□□□ -0.32
TREM2-201ENST00000338469 LRFN3Q9BTN0 628 aa13.03□□□□□ -0.32
TREM2-201ENST00000338469 C1QTNF1Q9BXJ1 281 aa13.03□□□□□ -0.32
TREM2-201ENST00000338469 ADAMTS10Q9H324 1103 aa13.03□□□□□ -0.32
TREM2-201ENST00000338469 C11orf16Q9NQ32 467 aa13.03□□□□□ -0.32
TREM2-201ENST00000338469 RNF19AQ9NV58 838 aa13.03□□□□□ -0.32
TREM2-201ENST00000338469 PLAGL2Q9UPG8 496 aa13.03□□□□□ -0.32
TREM2-201ENST00000338469 PCDHGC5Q9Y5F6 944 aa13.03□□□□□ -0.32
TREM2-201ENST00000338469 COL1A2P08123 1366 aa13.03□□□□□ -0.32
TREM2-201ENST00000338469 GRXCR2A6NFK2 248 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 C9IYK1 514 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 CHMP2AO43633 222 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 RPS6KA5O75582 802 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 PSMD10O75832 226 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 ITGB1P05556 798 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 RB1P06400 928 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 PSAPP07602 524 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 USP11P51784 963 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 SETQ01105 290 aaPredicted RBP13.02□□□□□ -0.33
TREM2-201ENST00000338469 CTC1Q2NKJ3 1217 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 ADGRD2Q7Z7M1 963 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 NEK8Q86SG6 692 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 NPAS4Q8IUM7 802 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 FAM178BQ8IXR5 827 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 CKAP2LQ8IYA6 745 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 LRRC71Q8N4P6 559 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 METTL13Q8N6R0 699 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 BBXQ8WY36 941 aaPredicted RBP13.02□□□□□ -0.33
TREM2-201ENST00000338469 MBOAT7Q96N66 472 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 ADAM2Q99965 735 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 SH2D3AQ9BRG2 576 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 NSUN3Q9H649 340 aaKnown RBP13.02□□□□□ -0.33
TREM2-201ENST00000338469 DISC1Q9NRI5 854 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 RGS18Q9NS28 235 aa13.02□□□□□ -0.33
TREM2-201ENST00000338469 FNDC1Q4ZHG4 1894 aaPredicted RBP13.02□□□□□ -0.33
TREM2-201ENST00000338469 CYP3A7-CYP3A51PA0A087WV96 503 aa13.01□□□□□ -0.33
TREM2-201ENST00000338469 CSDE1O75534 798 aaKnown RBP13.01□□□□□ -0.33
TREM2-201ENST00000338469 FGFR4P22455 802 aa13.01□□□□□ -0.33
TREM2-201ENST00000338469 CYP3A7P24462 503 aa13.01□□□□□ -0.33
TREM2-201ENST00000338469 TRAPPC10P48553 1259 aa13.01□□□□□ -0.33
TREM2-201ENST00000338469 SARSP49591 514 aaKnown RBP13.01□□□□□ -0.33
TREM2-201ENST00000338469 CRYBB1P53674 252 aaPredicted RBP13.01□□□□□ -0.33
TREM2-201ENST00000338469 FAM189BP81408 668 aa13.01□□□□□ -0.33
TREM2-201ENST00000338469 TARBP2Q15633 366 aaKnown RBP13.01□□□□□ -0.33
TREM2-201ENST00000338469 PTPROQ16827 1216 aa13.01□□□□□ -0.33
TREM2-201ENST00000338469 LETM2Q2VYF4 491 aa13.01□□□□□ -0.33
TREM2-201ENST00000338469 Q4G0T1 1027 aa13.01□□□□□ -0.33
TREM2-201ENST00000338469 RILPL1Q5EBL4 403 aa13.01□□□□□ -0.33
TREM2-201ENST00000338469 PTCRAQ6ISU1 281 aaPredicted RBP13.01□□□□□ -0.33
TREM2-201ENST00000338469 EFCAB12Q6NXP0 572 aa13.01□□□□□ -0.33
TREM2-201ENST00000338469 SMAP1Q8IYB5 467 aaPredicted RBP13.01□□□□□ -0.33
TREM2-201ENST00000338469 CMTR2Q8IYT2 770 aaKnown RBP13.01□□□□□ -0.33
TREM2-201ENST00000338469 KLHL23Q8NBE8 558 aa13.01□□□□□ -0.33
TREM2-201ENST00000338469 ETNPPLQ8TBG4 499 aa13.01□□□□□ -0.33
TREM2-201ENST00000338469 PABPC5Q96DU9 382 aaKnown RBP13.01□□□□□ -0.33
TREM2-201ENST00000338469 NAP1L4Q99733 375 aaKnown RBP13.01□□□□□ -0.33
TREM2-201ENST00000338469 FTHL17Q9BXU8 183 aa13.01□□□□□ -0.33
TREM2-201ENST00000338469 ATP6V1DQ9Y5K8 247 aa13.01□□□□□ -0.33
TREM2-201ENST00000338469 PLXNA4Q9HCM2 1894 aa13□□□□□ -0.33
TREM2-201ENST00000338469 WDR64B1ANS9 1081 aa13□□□□□ -0.33
TREM2-201ENST00000338469 M0QZ92 97 aa13□□□□□ -0.33
TREM2-201ENST00000338469 EML1O00423 815 aa13□□□□□ -0.33
TREM2-201ENST00000338469 SLC37A4O43826 429 aa13□□□□□ -0.33
TREM2-201ENST00000338469 CCNT1O60563 726 aaKnown RBP13□□□□□ -0.33
TREM2-201ENST00000338469 OATP04181 439 aa13□□□□□ -0.33
TREM2-201ENST00000338469 RPLP2P05387 115 aaKnown RBP13□□□□□ -0.33
TREM2-201ENST00000338469 FGFR1P11362 822 aa13□□□□□ -0.33
TREM2-201ENST00000338469 ATP2B1P20020 1258 aa13□□□□□ -0.33
TREM2-201ENST00000338469 NLRP11P59045 1033 aaKnown RBP13□□□□□ -0.33
TREM2-201ENST00000338469 PRKCEQ02156 737 aa13□□□□□ -0.33
TREM2-201ENST00000338469 CLUL1Q15846 466 aa13□□□□□ -0.33
TREM2-201ENST00000338469 TIGD5Q53EQ6 642 aa13□□□□□ -0.33
TREM2-201ENST00000338469 TTC38Q5R3I4 469 aa13□□□□□ -0.33
TREM2-201ENST00000338469 FAM173BQ6P4H8 233 aa13□□□□□ -0.33
TREM2-201ENST00000338469 LRRC55Q6ZSA7 311 aa13□□□□□ -0.33
TREM2-201ENST00000338469 TNPO1Q92973 898 aaKnown RBP13□□□□□ -0.33
TREM2-201ENST00000338469 ZNF396Q96N95 335 aaPredicted RBP13□□□□□ -0.33
TREM2-201ENST00000338469 RIT2Q99578 217 aa13□□□□□ -0.33
TREM2-201ENST00000338469 CLDND1Q9NY35 253 aa13□□□□□ -0.33
TREM2-201ENST00000338469 SAMM50Q9Y512 469 aa13□□□□□ -0.33
TREM2-201ENST00000338469 FAM86C2PA6NEL3 165 aa12.99□□□□□ -0.33
TREM2-201ENST00000338469 GAS7O60861 476 aa12.99□□□□□ -0.33
TREM2-201ENST00000338469 TBX10O75333 385 aa12.99□□□□□ -0.33
TREM2-201ENST00000338469 GCFC2P16383 781 aaKnown RBP12.99□□□□□ -0.33
TREM2-201ENST00000338469 TOB1P50616 345 aaPredicted RBP12.99□□□□□ -0.33
TREM2-201ENST00000338469 RBM10P98175 930 aaKnown RBP12.99□□□□□ -0.33
TREM2-201ENST00000338469 FOXD4L6Q3SYB3 417 aaPredicted RBP12.99□□□□□ -0.33
TREM2-201ENST00000338469 LRCH2Q5VUJ6 765 aa12.99□□□□□ -0.33
TREM2-201ENST00000338469 MOXD1Q6UVY6 613 aa12.99□□□□□ -0.33
TREM2-201ENST00000338469 FOXD4L3Q6VB84 417 aaPredicted RBP12.99□□□□□ -0.33
TREM2-201ENST00000338469 EP400NLQ6ZTU2 488 aa12.99□□□□□ -0.33
TREM2-201ENST00000338469 ZNF579Q8NAF0 562 aaKnown RBP12.99□□□□□ -0.33
TREM2-201ENST00000338469 C11orf84Q9BUA3 381 aaPredicted RBP12.99□□□□□ -0.33
TREM2-201ENST00000338469 IGFLR1Q9H665 355 aa12.99□□□□□ -0.33
TREM2-201ENST00000338469 CWH43Q9H720 699 aa12.99□□□□□ -0.33
TREM2-201ENST00000338469 WRAP73Q9P2S5 460 aaPredicted RBP12.99□□□□□ -0.33
TREM2-201ENST00000338469 TBKBP1A7MCY6 615 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms