RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 TYW1Q9NV66 732 aaKnown RBP25.6■■□□□ 1.69
TSKU-201ENST00000333090 RAD21O60216 631 aa25.6■■□□□ 1.69
TSKU-201ENST00000333090 DNAJC8O75937 253 aaPredicted RBP25.6■■□□□ 1.69
TSKU-201ENST00000333090 GHRP10912 638 aa25.6■■□□□ 1.69
TSKU-201ENST00000333090 PPP1R7Q15435 360 aa25.6■■□□□ 1.69
TSKU-201ENST00000333090 HIBCHQ6NVY1 386 aaPredicted RBP25.6■■□□□ 1.69
TSKU-201ENST00000333090 NAP1L4Q99733 375 aaKnown RBP25.6■■□□□ 1.69
TSKU-201ENST00000333090 PABPC3Q9H361 631 aaKnown RBP25.6■■□□□ 1.69
TSKU-201ENST00000333090 TNRC6CQ9HCJ0 1690 aaKnown RBP25.6■■□□□ 1.69
TSKU-201ENST00000333090 ATP8B3O60423 1300 aa25.6■■□□□ 1.69
TSKU-201ENST00000333090 FBXO25Q8TCJ0 367 aa25.59■■□□□ 1.69
TSKU-201ENST00000333090 LRRC4BQ9NT99 713 aa25.59■■□□□ 1.69
TSKU-201ENST00000333090 SUFUQ9UMX1 484 aa25.59■■□□□ 1.69
TSKU-201ENST00000333090 KRT13P13646 458 aa25.59■■□□□ 1.69
TSKU-201ENST00000333090 VPS72Q15906 364 aa25.59■■□□□ 1.69
TSKU-201ENST00000333090 PRR16Q569H4 304 aa25.59■■□□□ 1.69
TSKU-201ENST00000333090 ANO3Q9BYT9 981 aa25.59■■□□□ 1.69
TSKU-201ENST00000333090 SEPT11Q9NVA2 429 aaKnown RBP25.59■■□□□ 1.69
TSKU-201ENST00000333090 DONSONQ9NYP3 566 aa25.59■■□□□ 1.69
TSKU-201ENST00000333090 SBF2Q86WG5 1849 aa25.59■■□□□ 1.69
TSKU-201ENST00000333090 PLIN4Q96Q06 1357 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 PPIP5K2O43314 1243 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 CNBD1Q8NA66 436 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 SLC30A5Q8TAD4 765 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 UHMK1Q8TAS1 419 aaKnown RBP25.58■■□□□ 1.69
TSKU-201ENST00000333090 RNF25Q96BH1 459 aaPredicted RBP25.58■■□□□ 1.69
TSKU-201ENST00000333090 MXD3Q9BW11 206 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 AZI2Q9H6S1 392 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 VEZTQ9HBM0 779 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 MGRN1O60291 552 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 UFL1O94874 794 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 NUDT17P0C025 328 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 PLS1Q14651 629 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 SPDYCQ5MJ68 293 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 TRAPPC3LQ5T215 181 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 JAMLQ86YT9 394 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 SLFN12Q8IYM2 578 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 SYT2Q8N9I0 419 aaPredicted RBP25.58■■□□□ 1.69
TSKU-201ENST00000333090 CARD9Q9H257 536 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 IKZF4Q9H2S9 585 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 NHSQ6T4R5 1651 aa25.58■■□□□ 1.69
TSKU-201ENST00000333090 CCDC169A6NNP5 214 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 RGS16O15492 202 aaPredicted RBP25.57■■□□□ 1.68
TSKU-201ENST00000333090 LMNB1P20700 586 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 SOX5P35711 763 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 ELF3P78545 371 aaPredicted RBP25.57■■□□□ 1.68
TSKU-201ENST00000333090 IFI35P80217 286 aaPredicted RBP25.57■■□□□ 1.68
TSKU-201ENST00000333090 CYP4A11Q02928 519 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 KLRC3Q07444 240 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 SLC29A2Q14542 456 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 KIAA1755Q5JYT7 1200 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 MAGEC3Q8TD91 643 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 NAP1L3Q99457 506 aaPredicted RBP25.57■■□□□ 1.68
TSKU-201ENST00000333090 TMOD4Q9NZQ9 345 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 BAIAP2L1Q9UHR4 511 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 KIF13BQ9NQT8 1826 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 SLC16A3O15427 465 aaKnown RBP25.57■■□□□ 1.68
TSKU-201ENST00000333090 TMEM253P0C7T8 217 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 MMP13P45452 471 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 PPATQ06203 517 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 RC3H1Q5TC82 1133 aaKnown RBP25.57■■□□□ 1.68
TSKU-201ENST00000333090 TAX1BP1Q86VP1 789 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 OLIG1Q8TAK6 271 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 ATXN2LQ8WWM7 1075 aaKnown RBP25.57■■□□□ 1.68
TSKU-201ENST00000333090 ARHGEF26Q96DR7 871 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 ADAM7Q9H2U9 754 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 USP21Q9UK80 565 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 IGKV6D-41A0A0C4DH26 115 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 SLC8A1P32418 973 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 SPIRE1Q08AE8 756 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 DRAP1Q14919 205 aaPredicted RBP25.57■■□□□ 1.68
TSKU-201ENST00000333090 LRRC34Q8IZ02 419 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 ERMNQ8TAM6 284 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 TBC1D31Q96DN5 1066 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 PGM2Q96G03 612 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 ARFGEF1Q9Y6D6 1849 aa25.57■■□□□ 1.68
TSKU-201ENST00000333090 NCANO14594 1321 aa25.56■■□□□ 1.68
TSKU-201ENST00000333090 SFI1A8K8P3 1242 aa25.56■■□□□ 1.68
TSKU-201ENST00000333090 SPATA31C1P0DKV0 1188 aa25.56■■□□□ 1.68
TSKU-201ENST00000333090 SLURP2P0DP57 97 aa25.56■■□□□ 1.68
TSKU-201ENST00000333090 GABPAQ06546 454 aa25.56■■□□□ 1.68
TSKU-201ENST00000333090 GPATCH4Q5T3I0 446 aaKnown RBP25.56■■□□□ 1.68
TSKU-201ENST00000333090 AADACL2Q6P093 401 aa25.56■■□□□ 1.68
TSKU-201ENST00000333090 ALG3Q92685 438 aa25.56■■□□□ 1.68
TSKU-201ENST00000333090 BHMT2Q9H2M3 363 aa25.56■■□□□ 1.68
TSKU-201ENST00000333090 INTS9Q9NV88 658 aaKnown RBP25.56■■□□□ 1.68
TSKU-201ENST00000333090 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.56■■□□□ 1.684e-6■■□□□ 12.1
TSKU-201ENST00000333090 PCDHA1Q9Y5I3 950 aa25.56■■□□□ 1.68
TSKU-201ENST00000333090 MPHOSPH10O00566 681 aaKnown RBP25.56■■□□□ 1.68
TSKU-201ENST00000333090 TBCAO75347 108 aaKnown RBP25.56■■□□□ 1.68
TSKU-201ENST00000333090 PPP2R5EQ16537 467 aa25.56■■□□□ 1.68
TSKU-201ENST00000333090 PRMT1Q99873 361 aaKnown RBP25.56■■□□□ 1.68
TSKU-201ENST00000333090 ELAC2Q9BQ52 826 aaKnown RBP25.56■■□□□ 1.68
TSKU-201ENST00000333090 THAP2Q9H0W7 228 aa25.56■■□□□ 1.68
TSKU-201ENST00000333090 DNAJC12Q9UKB3 198 aa25.56■■□□□ 1.68
TSKU-201ENST00000333090 DIS3Q9Y2L1 958 aaKnown RBP25.56■■□□□ 1.68
TSKU-201ENST00000333090 MAPK7Q13164 816 aa25.55■■□□□ 1.68
TSKU-201ENST00000333090 UBAP2Q5T6F2 1119 aaKnown RBP25.55■■□□□ 1.68
TSKU-201ENST00000333090 ZDHHC24Q6UX98 284 aa25.55■■□□□ 1.68
TSKU-201ENST00000333090 SLF2Q8IX21 1173 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms