RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 PABPC3Q9H361 631 aaKnown RBP19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 ECT2Q9H8V3 914 aa19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 MTMR7Q9Y216 660 aa19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 CCDC169A6NNP5 214 aa19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 CCND1P24385 295 aa19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 CDC25CP30307 473 aa19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 IFI35P80217 286 aaPredicted RBP19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 BIRC2Q13490 618 aa19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 KCNK18Q7Z418 384 aa19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 DAAM2Q86T65 1068 aa19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 NT5DC3Q86UY8 548 aa19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 MTMR9Q96QG7 549 aa19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 GOPCQ9HD26 462 aa19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 TLDC2A0PJX2 215 aa19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 IGF2BP3O00425 579 aaKnown RBP eCLIP19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 RGS16O15492 202 aaPredicted RBP19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 ACTN1P12814 892 aa19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 PEX19P40855 299 aa19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 EPS15P42566 896 aa19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 FXR2P51116 673 aaKnown RBP eCLIP19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 SLC4A8Q2Y0W8 1093 aa19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 TTLL6Q8N841 843 aa19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 PRCCQ92733 491 aaPredicted RBP19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 RNF25Q96BH1 459 aaPredicted RBP19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 LRRC27Q9C0I9 530 aa19.62■□□□□ 0.73
CLSTN3-202ENST00000331148 SMCO2A6NFE2 343 aa19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 SMIM23A6NLE4 172 aa19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 OAS1P00973 400 aaKnown RBP19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 FGGP02679 453 aa19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 RHBDL3P58872 404 aa19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 ORC2Q13416 577 aaPredicted RBP19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 CALCRLQ16602 461 aa19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 DUPD1Q68J44 220 aa19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 MAPKAPK5Q8IW41 473 aa19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 MICAL1Q8TDZ2 1067 aa19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 SAAL1Q96ER3 474 aa19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 HES6Q96HZ4 224 aa19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 FGFBP2Q9BYJ0 223 aa19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 C6orf50Q9HD87 102 aa19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 CORO1CQ9ULV4 474 aaPredicted RBP19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 NENFQ9UMX5 172 aa19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 NR2E1Q9Y466 385 aa19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 DAGLAQ9Y4D2 1042 aa19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 BZW2Q9Y6E2 419 aaKnown RBP19.61■□□□□ 0.73
CLSTN3-202ENST00000331148 SPDYE3A6NKU9 549 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 LIN7AO14910 233 aaPredicted RBP19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 SNX3O60493 162 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 AGTP01019 485 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 BRD2P25440 801 aaKnown RBP19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 IFNAR2P48551 515 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 ZNF131P52739 623 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 PTENP60484 403 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 GALNTL6Q49A17 601 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 TMEM119Q4V9L6 283 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 FAM26FQ5R3K3 315 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 SYCE1Q8N0S2 351 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 SUPT20HQ8NEM7 779 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 SNX29Q8TEQ0 813 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 NUDT12Q9BQG2 462 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 MXD3Q9BW11 206 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 TTC7AQ9ULT0 858 aaPredicted RBP19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 ATP8B3O60423 1300 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 A0A0A6YYK5 440 aaPredicted RBP19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 PALM3A6NDB9 673 aaPredicted RBP19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 POTEMA6NI47 508 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 FLOT1O75955 427 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 DR1Q01658 176 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 KLRC3Q07444 240 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 TMEM266Q2M3C6 531 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 GRIPAP1Q4V328 841 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 NELFCDQ8IXH7 590 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 SPICE1Q8N0Z3 855 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 DNAJC19Q96DA6 116 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 KCNQ5Q9NR82 932 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 HOMER3Q9NSC5 361 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 CD2APQ9Y5K6 639 aa19.6■□□□□ 0.73
CLSTN3-202ENST00000331148 A8MUI8 341 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 ECE2O60344 883 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 GOLGA8HP0CJ92 632 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 GNA11P29992 359 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 DPY19L2P1Q6NXN4 242 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 ERICH1Q86X53 443 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 SH3GL3Q99963 347 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 ERP44Q9BS26 406 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 GGT7Q9UJ14 662 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 H2AFZP0C0S5 128 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 NT5C2P49902 561 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 PDE6CP51160 858 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 KCNH2Q12809 1159 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 STRIP1Q5VSL9 837 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 H2AFVQ71UI9 128 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 CPVLQ9H3G5 476 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 USP15Q9Y4E8 981 aaPredicted RBP19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 SNED1Q8TER0 1413 aa19.59■□□□□ 0.73
CLSTN3-202ENST00000331148 USP17L3A6NCW0 530 aa19.58■□□□□ 0.73
CLSTN3-202ENST00000331148 USP17L4A6NCW7 530 aa19.58■□□□□ 0.73
CLSTN3-202ENST00000331148 KRT16P08779 473 aa19.58■□□□□ 0.73
CLSTN3-202ENST00000331148 UCHL3P15374 230 aa19.58■□□□□ 0.73
CLSTN3-202ENST00000331148 DPEP1P16444 411 aa19.58■□□□□ 0.73
CLSTN3-202ENST00000331148 BLMHQ13867 455 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms