RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 TAAR1Q96RJ0 339 aa22.49■■□□□ 1.19
TTC39C-202ENST00000317571 SLC38A10Q9HBR0 1119 aa22.49■■□□□ 1.19
TTC39C-202ENST00000317571 F8VZ95 297 aa22.49■■□□□ 1.19
TTC39C-202ENST00000317571 PAFAH1B1P43034 410 aa22.49■■□□□ 1.19
TTC39C-202ENST00000317571 UGCGQ16739 394 aa22.49■■□□□ 1.19
TTC39C-202ENST00000317571 CIAPIN1Q6FI81 312 aa22.49■■□□□ 1.19
TTC39C-202ENST00000317571 ZSWIM2Q8NEG5 633 aa22.49■■□□□ 1.19
TTC39C-202ENST00000317571 FAM71BQ8TC56 605 aa22.49■■□□□ 1.19
TTC39C-202ENST00000317571 EXOC4Q96A65 974 aa22.49■■□□□ 1.19
TTC39C-202ENST00000317571 WNK4Q96J92 1243 aa22.49■■□□□ 1.19
TTC39C-202ENST00000317571 VPS33BQ9H267 617 aa22.49■■□□□ 1.19
TTC39C-202ENST00000317571 BCS1LQ9Y276 419 aa22.49■■□□□ 1.19
TTC39C-202ENST00000317571 ZSCAN5CA6NGD5 496 aaPredicted RBP22.48■■□□□ 1.19
TTC39C-202ENST00000317571 EVI5O60447 810 aa22.48■■□□□ 1.19
TTC39C-202ENST00000317571 LRRN2O75325 713 aa22.48■■□□□ 1.19
TTC39C-202ENST00000317571 CFAP221Q4G0U5 840 aa22.48■■□□□ 1.19
TTC39C-202ENST00000317571 HS2ST1Q7LGA3 356 aa22.48■■□□□ 1.19
TTC39C-202ENST00000317571 RDH13Q8NBN7 331 aa22.48■■□□□ 1.19
TTC39C-202ENST00000317571 PLEKHA4Q9H4M7 779 aa22.48■■□□□ 1.19
TTC39C-202ENST00000317571 EIF2AK2P19525 551 aaKnown RBP22.48■■□□□ 1.19
TTC39C-202ENST00000317571 RARRES1P49788 294 aa22.48■■□□□ 1.19
TTC39C-202ENST00000317571 RNASE9P60153 205 aaKnown RBP22.48■■□□□ 1.19
TTC39C-202ENST00000317571 DLG4P78352 724 aa22.48■■□□□ 1.19
TTC39C-202ENST00000317571 PCNX4Q63HM2 1172 aa22.48■■□□□ 1.19
TTC39C-202ENST00000317571 SYT11Q9BT88 431 aa22.48■■□□□ 1.19
TTC39C-202ENST00000317571 KIAA1683Q9H0B3 1180 aa22.48■■□□□ 1.19
TTC39C-202ENST00000317571 STIM2Q9P246 746 aa22.48■■□□□ 1.19
TTC39C-202ENST00000317571 PARP14Q460N5 1801 aa22.48■■□□□ 1.19
TTC39C-202ENST00000317571 K7ENM7 598 aa22.47■■□□□ 1.19
TTC39C-202ENST00000317571 ATP9AO75110 1047 aa22.47■■□□□ 1.19
TTC39C-202ENST00000317571 P4HBP07237 508 aaKnown RBP22.47■■□□□ 1.19
TTC39C-202ENST00000317571 NEK9Q8TD19 979 aa22.47■■□□□ 1.19
TTC39C-202ENST00000317571 DNAJC12Q9UKB3 198 aa22.47■■□□□ 1.19
TTC39C-202ENST00000317571 FAM170AA1A519 330 aa22.47■■□□□ 1.19
TTC39C-202ENST00000317571 GLI1P08151 1106 aa22.47■■□□□ 1.19
TTC39C-202ENST00000317571 RPS6P62753 249 aaKnown RBP22.47■■□□□ 1.19
TTC39C-202ENST00000317571 C10orf76Q5T2E6 689 aa22.47■■□□□ 1.19
TTC39C-202ENST00000317571 SLC30A5Q8TAD4 765 aa22.47■■□□□ 1.19
TTC39C-202ENST00000317571 VCAM1P19320 739 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 SOX5P35711 763 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 DRAP1Q14919 205 aaPredicted RBP22.46■■□□□ 1.19
TTC39C-202ENST00000317571 C8orf74Q6P047 294 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 NIPA1Q7RTP0 329 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 LMO3Q8TAP4 145 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 LPAR1Q92633 364 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 INTS2Q9H0H0 1204 aaKnown RBP22.46■■□□□ 1.19
TTC39C-202ENST00000317571 MED4Q9NPJ6 270 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 GGCXP38435 758 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 BFSP1Q12934 665 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 MTMR1Q13613 665 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 MTMR2Q13614 643 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 PGM5Q15124 567 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 SND1Q7KZF4 910 aaKnown RBP eCLIP22.46■■□□□ 1.19
TTC39C-202ENST00000317571 SLC9A9Q8IVB4 645 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 TPCN2Q8NHX9 752 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 PCIF1Q9H4Z3 704 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 PSD3Q9NYI0 1048 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 FRMD4BQ9Y2L6 1034 aa22.46■■□□□ 1.19
TTC39C-202ENST00000317571 EXOC3O60645 756 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 RNF40O75150 1001 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 FLOT1O75955 427 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 LMAN1P49257 510 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 PHLDB3Q6NSJ2 640 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 CCDC70Q6NSX1 233 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 U2AF1L4Q8WU68 220 aaKnown RBP22.45■■□□□ 1.18
TTC39C-202ENST00000317571 CBWD1Q9BRT8 395 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 GPRC5CQ9NQ84 441 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 PPP1R12BO60237 982 aaPredicted RBP22.45■■□□□ 1.18
TTC39C-202ENST00000317571 KIF4AO95239 1232 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 CCNE2O96020 404 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 FERP16591 822 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 STAT1P42224 750 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 ZNF280AP59817 542 aaPredicted RBP22.45■■□□□ 1.18
TTC39C-202ENST00000317571 TBC1D10BQ4KMP7 808 aaPredicted RBP22.45■■□□□ 1.18
TTC39C-202ENST00000317571 STXBP4Q6ZWJ1 553 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 TRMT1LQ7Z2T5 733 aaKnown RBP22.45■■□□□ 1.18
TTC39C-202ENST00000317571 GLYCTKQ8IVS8 523 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 SYCP3Q8IZU3 236 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 TSEN2Q8NCE0 465 aaKnown RBP22.45■■□□□ 1.18
TTC39C-202ENST00000317571 PLEKHO2Q8TD55 490 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 STK33Q9BYT3 514 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 RNF14Q9UBS8 474 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 PPP1R9AQ9ULJ8 1098 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 SAMM50Q9Y512 469 aa22.45■■□□□ 1.18
TTC39C-202ENST00000317571 ESYT3A0FGR9 886 aa22.44■■□□□ 1.18
TTC39C-202ENST00000317571 NFKBIEO00221 500 aa22.44■■□□□ 1.18
TTC39C-202ENST00000317571 NOP2P46087 812 aaKnown RBP22.44■■□□□ 1.18
TTC39C-202ENST00000317571 MYL7Q01449 175 aa22.44■■□□□ 1.18
TTC39C-202ENST00000317571 PPP2R5AQ15172 486 aa22.44■■□□□ 1.18
TTC39C-202ENST00000317571 HSP90B2PQ58FF3 399 aa22.44■■□□□ 1.18
TTC39C-202ENST00000317571 C1orf220Q5T0J3 134 aa22.44■■□□□ 1.18
TTC39C-202ENST00000317571 SAMD7Q7Z3H4 446 aa22.44■■□□□ 1.18
TTC39C-202ENST00000317571 PALB2Q86YC2 1186 aa22.44■■□□□ 1.18
TTC39C-202ENST00000317571 MCF2L2Q86YR7 1114 aa22.44■■□□□ 1.18
TTC39C-202ENST00000317571 RUBCNQ92622 972 aa22.44■■□□□ 1.18
TTC39C-202ENST00000317571 DBR1Q9UK59 544 aaKnown RBP22.44■■□□□ 1.18
TTC39C-202ENST00000317571 RIPK3Q9Y572 518 aa22.44■■□□□ 1.18
TTC39C-202ENST00000317571 IGSF9BQ9UPX0 1349 aa22.44■■□□□ 1.18
TTC39C-202ENST00000317571 QARSP47897 775 aaKnown RBP22.43■■□□□ 1.18
TTC39C-202ENST00000317571 TRADDQ15628 312 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms