RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 SLC35C1Q96A29 364 aa16.27■□□□□ 0.19
CHFR-202ENST00000315585 RUSC1Q9BVN2 902 aa16.27■□□□□ 0.19
CHFR-202ENST00000315585 TSPYL1Q9H0U9 437 aa16.27■□□□□ 0.19
CHFR-202ENST00000315585 RPAP3Q9H6T3 665 aaPredicted RBP16.27■□□□□ 0.19
CHFR-202ENST00000315585 NAGPAQ9UK23 515 aa16.27■□□□□ 0.19
CHFR-202ENST00000315585 ASTN1O14525 1302 aa16.27■□□□□ 0.19
CHFR-202ENST00000315585 PHACTR2O75167 634 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 SLC9A1P19634 815 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 RFX1P22670 979 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 NPEPPSP55786 919 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 GHRHRQ02643 423 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 ALCAMQ13740 583 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 FAM186BQ8IYM0 893 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 FAM76AQ8TAV0 307 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 CALR3Q96L12 384 aaKnown RBP16.26■□□□□ 0.19
CHFR-202ENST00000315585 C12orf42Q96LP6 360 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 TEKT3Q9BXF9 490 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 ADARB2Q9NS39 739 aaKnown RBP16.26■□□□□ 0.19
CHFR-202ENST00000315585 GCNT4Q9P109 453 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 TAL1P17542 331 aaPredicted RBP16.26■□□□□ 0.19
CHFR-202ENST00000315585 HOXD13P35453 343 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 GGCXP38435 758 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 NOP2P46087 812 aaKnown RBP16.26■□□□□ 0.19
CHFR-202ENST00000315585 NOL9Q5SY16 702 aaKnown RBP16.26■□□□□ 0.19
CHFR-202ENST00000315585 FAM178BQ8IXR5 827 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 AGBL1Q96MI9 1066 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 PSMB7Q99436 277 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 RIT2Q99578 217 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 RGL1Q9NZL6 768 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 DMGDHQ9UI17 866 aaKnown RBP16.26■□□□□ 0.19
CHFR-202ENST00000315585 ZNF536O15090 1300 aa16.26■□□□□ 0.19
CHFR-202ENST00000315585 EML1O00423 815 aa16.25■□□□□ 0.19
CHFR-202ENST00000315585 NCK2O43639 380 aa16.25■□□□□ 0.19
CHFR-202ENST00000315585 H2AFZP0C0S5 128 aa16.25■□□□□ 0.19
CHFR-202ENST00000315585 ZNF131P52739 623 aa16.25■□□□□ 0.19
CHFR-202ENST00000315585 CETN1Q12798 172 aa16.25■□□□□ 0.19
CHFR-202ENST00000315585 H2AFVQ71UI9 128 aa16.25■□□□□ 0.19
CHFR-202ENST00000315585 KLRG1Q96E93 195 aa16.25■□□□□ 0.19
CHFR-202ENST00000315585 ZNF577Q9BSK1 485 aa16.25■□□□□ 0.19
CHFR-202ENST00000315585 RBM12Q9NTZ6 932 aaKnown RBP16.25■□□□□ 0.19
CHFR-202ENST00000315585 FRMPD4Q14CM0 1322 aa16.25■□□□□ 0.19
CHFR-202ENST00000315585 GOLGA6CA6NDK9 693 aa16.25■□□□□ 0.19
CHFR-202ENST00000315585 GOLGA6DP0CG33 693 aa16.25■□□□□ 0.19
CHFR-202ENST00000315585 CLUL1Q15846 466 aa16.25■□□□□ 0.19
CHFR-202ENST00000315585 ZNF571Q7Z3V5 609 aaPredicted RBP16.25■□□□□ 0.19
CHFR-202ENST00000315585 DYDC2Q96IM9 177 aa16.25■□□□□ 0.19
CHFR-202ENST00000315585 GDF3Q9NR23 364 aa16.25■□□□□ 0.19
CHFR-202ENST00000315585 GOLGA6AQ9NYA3 693 aa16.25■□□□□ 0.19
CHFR-202ENST00000315585 ALAS1P13196 640 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 GUCY2CP25092 1073 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 JAM2P57087 298 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 CTTNQ14247 550 aaKnown RBP16.24■□□□□ 0.19
CHFR-202ENST00000315585 ENOX2Q16206 610 aaKnown RBP16.24■□□□□ 0.19
CHFR-202ENST00000315585 ZNF720Q7Z2F6 126 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 CPXCR1Q8N123 301 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 CYP2W1Q8TAV3 490 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 WHAMMQ8TF30 809 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 STK33Q9BYT3 514 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 TMOD4Q9NZQ9 345 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 ZHX2Q9Y6X8 837 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 RSPH10B2B2RC85 870 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 TGFB1I1O43294 461 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 FTCDO95954 541 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 RSPH10BP0C881 870 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 BCRP11274 1271 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 ACTN1P12814 892 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 OAZ1P54368 228 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 DPY19L2P1Q6NXN4 242 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 NIPA1Q7RTP0 329 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 SLC9A9Q8IVB4 645 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 ACTRT1Q8TDG2 376 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 ZKSCAN4Q969J2 545 aaPredicted RBP16.24■□□□□ 0.19
CHFR-202ENST00000315585 DCPSQ96C86 337 aaKnown RBP16.24■□□□□ 0.19
CHFR-202ENST00000315585 RNF181Q9P0P0 153 aa16.24■□□□□ 0.19
CHFR-202ENST00000315585 DIS3Q9Y2L1 958 aaKnown RBP16.24■□□□□ 0.19
CHFR-202ENST00000315585 SBF1O95248 1867 aa16.23■□□□□ 0.19
CHFR-202ENST00000315585 ARHGEF35A5YM69 484 aa16.23■□□□□ 0.19
CHFR-202ENST00000315585 CCDC188H7C350 402 aa16.23■□□□□ 0.19
CHFR-202ENST00000315585 MYBL2P10244 700 aa16.23■□□□□ 0.19
CHFR-202ENST00000315585 MAPTP10636 758 aaKnown RBP16.23■□□□□ 0.19
CHFR-202ENST00000315585 HIRAP54198 1017 aaPredicted RBP16.23■□□□□ 0.19
CHFR-202ENST00000315585 USP38Q8NB14 1042 aa16.23■□□□□ 0.19
CHFR-202ENST00000315585 PIGOQ8TEQ8 1089 aa16.23■□□□□ 0.19
CHFR-202ENST00000315585 BORCS6Q96GS4 357 aa16.23■□□□□ 0.19
CHFR-202ENST00000315585 INPP4AQ96PE3 977 aaPredicted RBP16.23■□□□□ 0.19
CHFR-202ENST00000315585 MAF1Q9H063 256 aa16.23■□□□□ 0.19
CHFR-202ENST00000315585 TMEM206Q9H813 350 aa16.23■□□□□ 0.19
CHFR-202ENST00000315585 RAVER2Q9HCJ3 691 aaKnown RBP16.23■□□□□ 0.19
CHFR-202ENST00000315585 CLIC2O15247 247 aa16.23■□□□□ 0.19
CHFR-202ENST00000315585 KIF4AO95239 1232 aa16.23■□□□□ 0.19
CHFR-202ENST00000315585 SLC7A5Q01650 507 aa16.23■□□□□ 0.19
CHFR-202ENST00000315585 ODR4Q5SWX8 454 aa16.23■□□□□ 0.19
CHFR-202ENST00000315585 RBM46Q8TBY0 533 aaKnown RBP16.23■□□□□ 0.19
CHFR-202ENST00000315585 HDAC7Q8WUI4 952 aa16.23■□□□□ 0.19
CHFR-202ENST00000315585 CLEC4DQ8WXI8 215 aa16.23■□□□□ 0.19
CHFR-202ENST00000315585 MXRA8Q9BRK3 442 aa16.23■□□□□ 0.19
CHFR-202ENST00000315585 LARSQ9P2J5 1176 aaKnown RBP16.23■□□□□ 0.19
CHFR-202ENST00000315585 ZC3H4Q9UPT8 1303 aaKnown RBP16.23■□□□□ 0.19
CHFR-202ENST00000315585 RPTORQ8N122 1335 aa16.22■□□□□ 0.19
CHFR-202ENST00000315585 CHMP2AO43633 222 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms