RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 TOGARAM1Q9Y4F4 1720 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 MED24O75448 989 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 FAM13AO94988 1023 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 ACSL3O95573 720 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 PDE6CP51160 858 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 PTENP60484 403 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 AADACL2Q6P093 401 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 FAM186BQ8IYM0 893 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 MARCH10Q8NA82 808 aaPredicted RBP12.05□□□□□ -0.48
PTPN7-201ENST00000309017 PAIP2Q9BPZ3 127 aaKnown RBP12.05□□□□□ -0.48
PTPN7-201ENST00000309017 REEP2Q9BRK0 252 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 ECT2Q9H8V3 914 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 SRP68Q9UHB9 627 aaKnown RBP12.05□□□□□ -0.48
PTPN7-201ENST00000309017 ANKRD36CQ5JPF3 1778 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 MYH7BA7E2Y1 1941 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 USP17L10C9JJH3 530 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 MGRN1O60291 552 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 DIAPH2O60879 1101 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 UBOX5O94941 541 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 ANP32DO95626 131 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 MARSP56192 900 aaKnown RBP12.05□□□□□ -0.48
PTPN7-201ENST00000309017 MESDQ14696 234 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 RASGEF1CQ8N431 466 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 GDAP1Q8TB36 358 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 TLCD1Q96CP7 247 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 BHMT2Q9H2M3 363 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 ERVK-5Q9HDB9 667 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 FGFR1OP2Q9NVK5 253 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 DNAJC17Q9NVM6 304 aaKnown RBP12.05□□□□□ -0.48
PTPN7-201ENST00000309017 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.05□□□□□ -0.48
PTPN7-201ENST00000309017 NOP53Q9NZM5 478 aaKnown RBP12.05□□□□□ -0.48
PTPN7-201ENST00000309017 CHORDC1Q9UHD1 332 aaPredicted RBP12.05□□□□□ -0.48
PTPN7-201ENST00000309017 AJAP1Q9UKB5 411 aaPredicted RBP12.05□□□□□ -0.48
PTPN7-201ENST00000309017 EIF4E1BA6NMX2 242 aaKnown RBP12.05□□□□□ -0.48
PTPN7-201ENST00000309017 RSPH10B2B2RC85 870 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 SUN1O94901 812 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 RSPH10BP0C881 870 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 CDC25CP30307 473 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 RFC4P35249 363 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 LACTBP83111 547 aaPredicted RBP12.05□□□□□ -0.48
PTPN7-201ENST00000309017 PLS1Q14651 629 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 MYCT1Q8N699 235 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 HES6Q96HZ4 224 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 BCS1LQ9Y276 419 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 MYH1P12882 1939 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 MYH4Q9Y623 1939 aa12.05□□□□□ -0.48
PTPN7-201ENST00000309017 CFAP73A6NFT4 308 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 FAM187AA6NFU0 413 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 TCP11X1B4DZS4 312 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 PPIP5K2O43314 1243 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 SPOPO43791 374 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 PSMC6P62333 389 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 CROCCP2Q86T23 111 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 IFT74Q96LB3 600 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 JMJD4Q9H9V9 463 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 TRPC6Q9Y210 931 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 AGTP01019 485 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 SOX5P35711 763 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 PRKCIP41743 596 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 MAPK7Q13164 816 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 ITIH4Q14624 930 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 EPHA7Q15375 998 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 FOXR2Q6PJQ5 311 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 HS2ST1Q7LGA3 356 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 RNF25Q96BH1 459 aaPredicted RBP12.04□□□□□ -0.48
PTPN7-201ENST00000309017 THAP2Q9H0W7 228 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 PARP2Q9UGN5 583 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 MTUS1Q9ULD2 1270 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 PCDHA1Q9Y5I3 950 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 A0A1B0GUL6 1792 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 IGF2BP3O00425 579 aaKnown RBP eCLIP12.04□□□□□ -0.48
PTPN7-201ENST00000309017 ASAP2O43150 1006 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 AKR1B1P15121 316 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 MMP14P50281 582 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 KCNJ2P63252 427 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 DHX34Q14147 1143 aaKnown RBP12.04□□□□□ -0.48
PTPN7-201ENST00000309017 MFSD14BQ5SR56 506 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 BARGINQ6ZT62 677 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 SPDL1Q96EA4 605 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 CARD9Q9H257 536 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 TYW1Q9NV66 732 aaKnown RBP12.04□□□□□ -0.48
PTPN7-201ENST00000309017 TAF1P21675 1872 aa12.04□□□□□ -0.48
PTPN7-201ENST00000309017 A0A0A6YYK5 440 aaPredicted RBP12.03□□□□□ -0.48
PTPN7-201ENST00000309017 PDXKO00764 312 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 TRIM49P0CI25 452 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 TRIM49CP0CI26 452 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 CALRP27797 417 aaKnown RBP12.03□□□□□ -0.48
PTPN7-201ENST00000309017 SMARCA1P28370 1054 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 PDE6BP35913 854 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 ATP11AP98196 1134 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 KCNA1Q09470 495 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 LONRF1Q17RB8 773 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 DUPD1Q68J44 220 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 CCDC137Q6PK04 289 aaKnown RBP12.03□□□□□ -0.48
PTPN7-201ENST00000309017 SLC51AQ86UW1 340 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 SYCP3Q8IZU3 236 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 LNX1Q8TBB1 728 aaPredicted RBP12.03□□□□□ -0.48
PTPN7-201ENST00000309017 ATP8B4Q8TF62 1192 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 CENPTQ96BT3 561 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 ARHGEF26Q96DR7 871 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms