RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 SEMA6BQ9H3T3 888 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 SLC38A10Q9HBR0 1119 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 POLD4Q9HCU8 107 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 KCNMB3Q9NPA1 279 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 BATF3Q9NR55 127 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 PPP1R9AQ9ULJ8 1098 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 GRID2IPA4D2P6 1211 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 E9PMD0 336 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 MEIS1O00470 390 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 NDUFAB1O14561 156 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 CHMP2AO43633 222 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 PLA2G6O60733 806 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 POTEIP0CG38 1075 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 POTEJP0CG39 1038 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 FNTAP49354 379 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 INHBEP58166 350 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 CYP4A11Q02928 519 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 TTLL12Q14166 644 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 CFAP58Q5T655 872 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 FBXW10Q5XX13 1052 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 ETNPPLQ8TBG4 499 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 BAP1Q92560 729 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 WDR18Q9BV38 432 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 EPN3Q9H201 632 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 RBM12Q9NTZ6 932 aaKnown RBP11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 KIAA1024Q9UPX6 916 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 CYP3A7-CYP3A51PA0A087WV96 503 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 POTEB3A0JP26 581 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 POTECB2RU33 542 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 PIK3CDO00329 1044 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 MEFVO15553 781 aaPredicted RBP11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 FCER1AP12319 257 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 CYP3A7P24462 503 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 EPHX2P34913 555 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 MATR3P43243 847 aaKnown RBP eCLIP11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 ORC2Q13416 577 aaPredicted RBP11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 DRP2Q13474 957 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 PDIA5Q14554 519 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 PLS1Q14651 629 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 PDXDC1Q6P996 788 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 POTEBQ6S5H4 581 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 NSMFQ6X4W1 530 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 KIAA0895Q8NCT3 520 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 IL31RAQ8NI17 732 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 CLEC4DQ8WXI8 215 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 RAB34Q9BZG1 259 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 ELP3Q9H9T3 547 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 AS3MTQ9HBK9 375 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 HOMER3Q9NSC5 361 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 PVALEFA0A1B0GWK0 134 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 MYMKA6NI61 221 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 VWA5AO00534 786 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 KIAA0754O94854 1291 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 CACNB1Q02641 598 aaPredicted RBP11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 PDCLQ13371 301 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 NAIF1Q69YI7 327 aaPredicted RBP11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 EIF1ADQ8N9N8 165 aaKnown RBP11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 WHAMMQ8TF30 809 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 TCP11Q8WWU5 503 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 SYN2Q92777 582 aaPredicted RBP11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 HINFPQ9BQA5 517 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 AFG3L2Q9Y4W6 797 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 SNCAIPQ9Y6H5 919 aa11.24□□□□□ -0.61
APOBEC3F-201ENST00000308521 POTEFA5A3E0 1075 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 LRRC53A6NM62 1247 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 EPHB6O15197 1021 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 MED24O75448 989 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 ARP10275 920 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 SMTNP53814 917 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 RBBP5Q15291 538 aaKnown RBP11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 PDCD2Q16342 344 aaPredicted RBP11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 TREML2Q5T2D2 321 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 POTEGQ6S5H5 508 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 POTEEQ6S8J3 1075 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 SV2BQ7L1I2 683 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 LARP4BQ92615 738 aaKnown RBP11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 SALL4Q9UJQ4 1053 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 SAMM50Q9Y512 469 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 IGLV3-22A0A075B6J6 115 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 NPHP3-ACAD11A0A0J9YXS1 232 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 ZNF233A6NK53 670 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 DDX39AO00148 427 aaKnown RBP11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 EML1O00423 815 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 PPP1R12BO60237 982 aaPredicted RBP11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 ZBED4O75132 1171 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 EIF2AK2P19525 551 aaKnown RBP11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 CXCR5P32302 372 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 LSP1P33241 339 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 NAP1L1P55209 391 aaKnown RBP11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 PSMC6P62333 389 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 RPS6P62753 249 aaKnown RBP11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 LRRC63Q05C16 580 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 RRAGAQ7L523 313 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 GUF1Q8N442 669 aaKnown RBP11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 CCDC26Q8TAB7 109 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 ZNF483Q8TF39 744 aaPredicted RBP11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 PIK3R5Q8WYR1 880 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 OTUD5Q96G74 571 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 CCDC43Q96MW1 224 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms