RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 RFC5P40937 340 aa23.26■■□□□ 1.31
MRPL39-201ENST00000307301 ERVK-21P61565 698 aa23.26■■□□□ 1.31
MRPL39-201ENST00000307301 RHPN2Q8IUC4 686 aa23.26■■□□□ 1.31
MRPL39-201ENST00000307301 ADAM2Q99965 735 aa23.26■■□□□ 1.31
MRPL39-201ENST00000307301 KIAA1671Q9BY89 1806 aa23.25■■□□□ 1.31
MRPL39-201ENST00000307301 DENND3A2RUS2 1198 aa23.25■■□□□ 1.31
MRPL39-201ENST00000307301 DARSP14868 501 aaKnown RBP23.25■■□□□ 1.31
MRPL39-201ENST00000307301 IBSPP21815 317 aaPredicted RBP23.25■■□□□ 1.31
MRPL39-201ENST00000307301 LARP1BQ659C4 914 aaKnown RBP23.25■■□□□ 1.31
MRPL39-201ENST00000307301 NPAS4Q8IUM7 802 aa23.25■■□□□ 1.31
MRPL39-201ENST00000307301 CRIPAKQ8N1N5 446 aa23.25■■□□□ 1.31
MRPL39-201ENST00000307301 C17orf80Q9BSJ5 609 aa23.25■■□□□ 1.31
MRPL39-201ENST00000307301 RC3H2Q9HBD1 1191 aaKnown RBP23.25■■□□□ 1.31
MRPL39-201ENST00000307301 EYSQ5T1H1 3165 aa23.24■■□□□ 1.31
MRPL39-201ENST00000307301 A0A087WZ62 844 aa23.24■■□□□ 1.31
MRPL39-201ENST00000307301 MED24O75448 989 aa23.24■■□□□ 1.31
MRPL39-201ENST00000307301 CSDE1O75534 798 aaKnown RBP23.24■■□□□ 1.31
MRPL39-201ENST00000307301 SPATA31C1P0DKV0 1188 aa23.24■■□□□ 1.31
MRPL39-201ENST00000307301 FGFR4P22455 802 aa23.24■■□□□ 1.31
MRPL39-201ENST00000307301 PTGDRQ13258 359 aa23.24■■□□□ 1.31
MRPL39-201ENST00000307301 EMC2Q15006 297 aa23.24■■□□□ 1.31
MRPL39-201ENST00000307301 FAM43BQ6ZT52 329 aaPredicted RBP23.24■■□□□ 1.31
MRPL39-201ENST00000307301 KSR1Q8IVT5 923 aa23.24■■□□□ 1.31
MRPL39-201ENST00000307301 EXOC8Q8IYI6 725 aa23.24■■□□□ 1.31
MRPL39-201ENST00000307301 GDPD5Q8WTR4 605 aa23.24■■□□□ 1.31
MRPL39-201ENST00000307301 TMEM143Q96AN5 459 aa23.24■■□□□ 1.31
MRPL39-201ENST00000307301 FDXACB1Q9BRP7 624 aaPredicted RBP23.24■■□□□ 1.31
MRPL39-201ENST00000307301 GCOM2Q9BZD3 368 aaPredicted RBP23.24■■□□□ 1.31
MRPL39-201ENST00000307301 RGS18Q9NS28 235 aa23.24■■□□□ 1.31
MRPL39-201ENST00000307301 ANKEF1Q9NU02 776 aa23.24■■□□□ 1.31
MRPL39-201ENST00000307301 ADGRA3Q8IWK6 1321 aa23.24■■□□□ 1.31
MRPL39-201ENST00000307301 FNDC1Q4ZHG4 1894 aaPredicted RBP23.24■■□□□ 1.31
MRPL39-201ENST00000307301 A0A087WWV3 80 aa23.23■■□□□ 1.31
MRPL39-201ENST00000307301 DGKIO75912 1065 aa23.23■■□□□ 1.31
MRPL39-201ENST00000307301 SARSP49591 514 aaKnown RBP23.23■■□□□ 1.31
MRPL39-201ENST00000307301 CDC42EP1Q00587 391 aa23.23■■□□□ 1.31
MRPL39-201ENST00000307301 GRB10Q13322 594 aa23.23■■□□□ 1.31
MRPL39-201ENST00000307301 DSC3Q14574 896 aa23.23■■□□□ 1.31
MRPL39-201ENST00000307301 CATSPER3Q86XQ3 398 aa23.23■■□□□ 1.31
MRPL39-201ENST00000307301 PIGOQ8TEQ8 1089 aa23.23■■□□□ 1.31
MRPL39-201ENST00000307301 PPM1EQ8WY54 764 aa23.23■■□□□ 1.31
MRPL39-201ENST00000307301 ZNF689Q96CS4 500 aaPredicted RBP23.23■■□□□ 1.31
MRPL39-201ENST00000307301 NLRP4Q96MN2 994 aa23.23■■□□□ 1.31
MRPL39-201ENST00000307301 TUFT1Q9NNX1 390 aa23.23■■□□□ 1.31
MRPL39-201ENST00000307301 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.23■■□□□ 1.31
MRPL39-201ENST00000307301 C1orf112Q9NSG2 853 aa23.23■■□□□ 1.31
MRPL39-201ENST00000307301 C9IYK1 514 aa23.22■■□□□ 1.31
MRPL39-201ENST00000307301 LPXNO60711 386 aa23.22■■□□□ 1.31
MRPL39-201ENST00000307301 STAG3L1P0CL83 205 aa23.22■■□□□ 1.31
MRPL39-201ENST00000307301 FXR2P51116 673 aaKnown RBP eCLIP23.22■■□□□ 1.31
MRPL39-201ENST00000307301 RILPL1Q5EBL4 403 aa23.22■■□□□ 1.31
MRPL39-201ENST00000307301 SLC24A5Q71RS6 500 aa23.22■■□□□ 1.31
MRPL39-201ENST00000307301 ZNF410Q86VK4 478 aa23.22■■□□□ 1.31
MRPL39-201ENST00000307301 FIBCD1Q8N539 461 aa23.22■■□□□ 1.31
MRPL39-201ENST00000307301 SLC17A8Q8NDX2 589 aa23.22■■□□□ 1.31
MRPL39-201ENST00000307301 ERMNQ8TAM6 284 aa23.22■■□□□ 1.31
MRPL39-201ENST00000307301 PRPF31Q8WWY3 499 aaKnown RBP23.22■■□□□ 1.31
MRPL39-201ENST00000307301 MTRQ99707 1265 aa23.22■■□□□ 1.31
MRPL39-201ENST00000307301 POLR3CQ9BUI4 534 aaPredicted RBP23.22■■□□□ 1.31
MRPL39-201ENST00000307301 XPNPEP1Q9NQW7 623 aa23.22■■□□□ 1.31
MRPL39-201ENST00000307301 LRFN2Q9ULH4 789 aa23.22■■□□□ 1.31
MRPL39-201ENST00000307301 COL4A3BPQ9Y5P4 624 aa23.22■■□□□ 1.31
MRPL39-201ENST00000307301 GAS2O43903 313 aaKnown RBP23.21■■□□□ 1.31
MRPL39-201ENST00000307301 RARRES1P49788 294 aa23.21■■□□□ 1.31
MRPL39-201ENST00000307301 CCDC85BQ15834 202 aaPredicted RBP23.21■■□□□ 1.31
MRPL39-201ENST00000307301 FBXO22Q8NEZ5 403 aa23.21■■□□□ 1.31
MRPL39-201ENST00000307301 PSPC1Q8WXF1 523 aaKnown RBP23.21■■□□□ 1.31
MRPL39-201ENST00000307301 CCDC43Q96MW1 224 aaKnown RBP23.21■■□□□ 1.31
MRPL39-201ENST00000307301 MTCH2Q9Y6C9 303 aa23.21■■□□□ 1.31
MRPL39-201ENST00000307301 POU3F3P20264 500 aaPredicted RBP23.2■■□□□ 1.3
MRPL39-201ENST00000307301 RPA1P27694 616 aa23.2■■□□□ 1.3
MRPL39-201ENST00000307301 GATMP50440 423 aa23.2■■□□□ 1.3
MRPL39-201ENST00000307301 BTG3Q14201 252 aaPredicted RBP23.2■■□□□ 1.3
MRPL39-201ENST00000307301 EPC2Q52LR7 807 aa23.2■■□□□ 1.3
MRPL39-201ENST00000307301 POTEGQ6S5H5 508 aa23.2■■□□□ 1.3
MRPL39-201ENST00000307301 MICALL1Q8N3F8 863 aa23.2■■□□□ 1.3
MRPL39-201ENST00000307301 TCP11Q8WWU5 503 aa23.2■■□□□ 1.3
MRPL39-201ENST00000307301 SAMD11Q96NU1 681 aa23.2■■□□□ 1.3
MRPL39-201ENST00000307301 LRWD1Q9UFC0 647 aa23.2■■□□□ 1.3
MRPL39-201ENST00000307301 PCDHB7Q9Y5E2 793 aa23.2■■□□□ 1.3
MRPL39-201ENST00000307301 K7ELQ4 463 aaPredicted RBP23.19■■□□□ 1.3
MRPL39-201ENST00000307301 LAD1O00515 517 aa23.19■■□□□ 1.3
MRPL39-201ENST00000307301 GTPBP6O43824 516 aaPredicted RBP23.19■■□□□ 1.3
MRPL39-201ENST00000307301 DGAT1O75907 488 aa23.19■■□□□ 1.3
MRPL39-201ENST00000307301 LINC00271P0C7V0 271 aa23.19■■□□□ 1.3
MRPL39-201ENST00000307301 SRGAP2CP0DJJ0 459 aa23.19■■□□□ 1.3
MRPL39-201ENST00000307301 XRCC6P12956 609 aaKnown RBP eCLIP23.19■■□□□ 1.3
MRPL39-201ENST00000307301 ZSCAN20P17040 1043 aaPredicted RBP23.19■■□□□ 1.3
MRPL39-201ENST00000307301 LAMTOR4Q0VGL1 99 aa23.19■■□□□ 1.3
MRPL39-201ENST00000307301 PAN2Q504Q3 1202 aaKnown RBP23.19■■□□□ 1.3
MRPL39-201ENST00000307301 TMEM192Q8IY95 271 aa23.19■■□□□ 1.3
MRPL39-201ENST00000307301 IGSF22Q8N9C0 903 aa23.19■■□□□ 1.3
MRPL39-201ENST00000307301 INO80BQ9C086 356 aaPredicted RBP23.19■■□□□ 1.3
MRPL39-201ENST00000307301 ATP6V0A4Q9HBG4 840 aa23.19■■□□□ 1.3
MRPL39-201ENST00000307301 IFT122Q9HBG6 1241 aa23.19■■□□□ 1.3
MRPL39-201ENST00000307301 SFPQP23246 707 aaKnown RBP eCLIP23.18■■□□□ 1.3
MRPL39-201ENST00000307301 CCT6AP40227 531 aaKnown RBP23.18■■□□□ 1.3
MRPL39-201ENST00000307301 PRPHP41219 470 aa23.18■■□□□ 1.3
MRPL39-201ENST00000307301 FAM189BP81408 668 aa23.18■■□□□ 1.3
MRPL39-201ENST00000307301 PDIA5Q14554 519 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms