RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 ITGB8P26012 769 aa27.17■■□□□ 1.94
HOXC9-201ENST00000303450 SYKP43405 635 aa27.17■■□□□ 1.94
HOXC9-201ENST00000303450 RHPN2Q8IUC4 686 aa27.17■■□□□ 1.94
HOXC9-201ENST00000303450 GOLPH3LQ9H4A5 285 aa27.17■■□□□ 1.94
HOXC9-201ENST00000303450 PRPF40AO75400 957 aaKnown RBP27.16■■□□□ 1.94
HOXC9-201ENST00000303450 IQCF3P0C7M6 154 aa27.16■■□□□ 1.94
HOXC9-201ENST00000303450 PRPF31Q8WWY3 499 aaKnown RBP27.16■■□□□ 1.94
HOXC9-201ENST00000303450 PPP1R16BQ96T49 567 aa27.16■■□□□ 1.94
HOXC9-201ENST00000303450 POLR3FQ9H1D9 316 aaPredicted RBP27.16■■□□□ 1.94
HOXC9-201ENST00000303450 WNT8AQ9H1J5 351 aa27.16■■□□□ 1.94
HOXC9-201ENST00000303450 GPRC5CQ9NQ84 441 aa27.16■■□□□ 1.94
HOXC9-201ENST00000303450 GINS2Q9Y248 185 aa27.16■■□□□ 1.94
HOXC9-201ENST00000303450 CDY2AQ9Y6F7 541 aa27.16■■□□□ 1.94
HOXC9-201ENST00000303450 GADD45BO75293 160 aaPredicted RBP27.16■■□□□ 1.94
HOXC9-201ENST00000303450 NLRP11P59045 1033 aaKnown RBP27.16■■□□□ 1.94
HOXC9-201ENST00000303450 CDC42EP1Q00587 391 aa27.16■■□□□ 1.94
HOXC9-201ENST00000303450 FAM26DQ5JW98 314 aa27.16■■□□□ 1.94
HOXC9-201ENST00000303450 MFSD5Q6N075 450 aa27.16■■□□□ 1.94
HOXC9-201ENST00000303450 ZNF710Q8N1W2 664 aa27.16■■□□□ 1.94
HOXC9-201ENST00000303450 SCLYQ96I15 445 aa27.16■■□□□ 1.94
HOXC9-201ENST00000303450 CELF4Q9BZC1 486 aaKnown RBP27.16■■□□□ 1.94
HOXC9-201ENST00000303450 COL4A3BPQ9Y5P4 624 aa27.16■■□□□ 1.94
HOXC9-201ENST00000303450 TRPV2Q9Y5S1 764 aa27.16■■□□□ 1.94
HOXC9-201ENST00000303450 CHRNA1P02708 482 aa27.15■■□□□ 1.94
HOXC9-201ENST00000303450 KRT18P05783 430 aaKnown RBP27.15■■□□□ 1.94
HOXC9-201ENST00000303450 GUCY2CP25092 1073 aa27.15■■□□□ 1.94
HOXC9-201ENST00000303450 RAD51AP2Q09MP3 1159 aa27.15■■□□□ 1.94
HOXC9-201ENST00000303450 MXD4Q14582 209 aaPredicted RBP27.15■■□□□ 1.94
HOXC9-201ENST00000303450 KIZQ2M2Z5 673 aa27.15■■□□□ 1.94
HOXC9-201ENST00000303450 ARSHQ5FYA8 562 aa27.15■■□□□ 1.94
HOXC9-201ENST00000303450 CEP57L1Q8IYX8 460 aa27.15■■□□□ 1.94
HOXC9-201ENST00000303450 TMEM199Q8N511 208 aa27.15■■□□□ 1.94
HOXC9-201ENST00000303450 SCLT1Q96NL6 688 aa27.15■■□□□ 1.94
HOXC9-201ENST00000303450 TIPINQ9BVW5 301 aa27.15■■□□□ 1.94
HOXC9-201ENST00000303450 PCDH10Q9P2E7 1040 aa27.15■■□□□ 1.94
HOXC9-201ENST00000303450 PDE4DIPQ5VU43 2346 aa27.14■■□□□ 1.94
HOXC9-201ENST00000303450 ASAP2O43150 1006 aa27.14■■□□□ 1.94
HOXC9-201ENST00000303450 ARL2P36404 184 aa27.14■■□□□ 1.94
HOXC9-201ENST00000303450 MGAT3Q09327 533 aa27.14■■□□□ 1.94
HOXC9-201ENST00000303450 LAMTOR4Q0VGL1 99 aa27.14■■□□□ 1.94
HOXC9-201ENST00000303450 TRAF7Q6Q0C0 670 aa27.14■■□□□ 1.94
HOXC9-201ENST00000303450 NLRP7Q8WX94 980 aa27.14■■□□□ 1.94
HOXC9-201ENST00000303450 KIFAP3Q92845 792 aa27.14■■□□□ 1.94
HOXC9-201ENST00000303450 BADQ92934 168 aa27.14■■□□□ 1.94
HOXC9-201ENST00000303450 LBHD1Q9BQE6 289 aaPredicted RBP27.14■■□□□ 1.94
HOXC9-201ENST00000303450 MAGEF1Q9HAY2 307 aa27.14■■□□□ 1.94
HOXC9-201ENST00000303450 POLD4Q9HCU8 107 aa27.14■■□□□ 1.94
HOXC9-201ENST00000303450 USP25Q9UHP3 1055 aa27.14■■□□□ 1.94
HOXC9-201ENST00000303450 SERTAD1Q9UHV2 236 aa27.14■■□□□ 1.94
HOXC9-201ENST00000303450 HIP1RO75146 1068 aa27.13■■□□□ 1.93
HOXC9-201ENST00000303450 PARNO95453 639 aaKnown RBP27.13■■□□□ 1.93
HOXC9-201ENST00000303450 GPC3P51654 580 aa27.13■■□□□ 1.93
HOXC9-201ENST00000303450 UBE2HP62256 183 aa27.13■■□□□ 1.93
HOXC9-201ENST00000303450 KSR1Q8IVT5 923 aa27.13■■□□□ 1.93
HOXC9-201ENST00000303450 ZNF668Q96K58 619 aaPredicted RBP27.13■■□□□ 1.93
HOXC9-201ENST00000303450 DRC1Q96MC2 740 aa27.13■■□□□ 1.93
HOXC9-201ENST00000303450 NLRP4Q96MN2 994 aa27.13■■□□□ 1.93
HOXC9-201ENST00000303450 LRRC27Q9C0I9 530 aa27.13■■□□□ 1.93
HOXC9-201ENST00000303450 TNMDQ9H2S6 317 aa27.13■■□□□ 1.93
HOXC9-201ENST00000303450 KBTBD4Q9NVX7 518 aa27.13■■□□□ 1.93
HOXC9-201ENST00000303450 TANC1Q9C0D5 1861 aa27.12■■□□□ 1.93
HOXC9-201ENST00000303450 NPHP3-ACAD11A0A0J9YXS1 232 aa27.12■■□□□ 1.93
HOXC9-201ENST00000303450 GOLGA6L22H0YM25 854 aa27.12■■□□□ 1.93
HOXC9-201ENST00000303450 GPR32O75388 356 aa27.12■■□□□ 1.93
HOXC9-201ENST00000303450 SLFN14P0C7P3 912 aa27.12■■□□□ 1.93
HOXC9-201ENST00000303450 AMPD3Q01432 767 aa27.12■■□□□ 1.93
HOXC9-201ENST00000303450 ASAP3Q8TDY4 903 aa27.12■■□□□ 1.93
HOXC9-201ENST00000303450 STAMQ92783 540 aa27.12■■□□□ 1.93
HOXC9-201ENST00000303450 ADAMTS10Q9H324 1103 aa27.12■■□□□ 1.93
HOXC9-201ENST00000303450 CEP290O15078 2479 aa27.12■■□□□ 1.93
HOXC9-201ENST00000303450 ACTN4O43707 911 aaKnown RBP27.11■■□□□ 1.93
HOXC9-201ENST00000303450 ZNF202O95125 648 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 SRGAP2CP0DJJ0 459 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 GLRA2P23416 452 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 RFC2P35250 354 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 CRYBB1P53674 252 aaPredicted RBP27.11■■□□□ 1.93
HOXC9-201ENST00000303450 FAM160A1Q05DH4 1040 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 TFDP1Q14186 410 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 LONRF3Q496Y0 759 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 ZNF410Q86VK4 478 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 OSMRQ99650 979 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 CDHR5Q9HBB8 845 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 MYMKA6NI61 221 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 CSF2RAP15509 400 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 MDM2Q00987 491 aaPredicted RBP27.11■■□□□ 1.93
HOXC9-201ENST00000303450 CACNB1Q02641 598 aaPredicted RBP27.11■■□□□ 1.93
HOXC9-201ENST00000303450 FPGSQ05932 587 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 DYMQ7RTS9 669 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 DDX12PQ92771 950 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 IFT74Q96LB3 600 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 REEP2Q9BRK0 252 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 ODF2LQ9ULJ1 636 aa27.11■■□□□ 1.93
HOXC9-201ENST00000303450 LTBP2Q14767 1821 aa27.1■■□□□ 1.93
HOXC9-201ENST00000303450 TNRC18O15417 2968 aaPredicted RBP27.1■■□□□ 1.93
HOXC9-201ENST00000303450 A0A087WZ62 844 aa27.1■■□□□ 1.93
HOXC9-201ENST00000303450 H0YGN5 161 aa27.1■■□□□ 1.93
HOXC9-201ENST00000303450 GIT2Q14161 759 aa27.1■■□□□ 1.93
HOXC9-201ENST00000303450 MBTPS1Q14703 1052 aa27.1■■□□□ 1.93
HOXC9-201ENST00000303450 FMR1NBQ8N0W7 255 aaPredicted RBP27.1■■□□□ 1.93
HOXC9-201ENST00000303450 DAW1Q8N136 415 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms