RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 USP8P40818 1118 aa12.18□□□□□ -0.46
IDH3A-201ENST00000299518 AEBP2Q6ZN18 517 aaPredicted RBP12.18□□□□□ -0.46
IDH3A-201ENST00000299518 GBP6Q6ZN66 633 aa12.18□□□□□ -0.46
IDH3A-201ENST00000299518 MIER3Q7Z3K6 550 aa12.18□□□□□ -0.46
IDH3A-201ENST00000299518 OLIG1Q8TAK6 271 aa12.18□□□□□ -0.46
IDH3A-201ENST00000299518 FAM184BQ9ULE4 1060 aa12.18□□□□□ -0.46
IDH3A-201ENST00000299518 SLC16A4O15374 487 aa12.17□□□□□ -0.46
IDH3A-201ENST00000299518 C8orf74Q6P047 294 aa12.17□□□□□ -0.46
IDH3A-201ENST00000299518 SAAL1Q96ER3 474 aa12.17□□□□□ -0.46
IDH3A-201ENST00000299518 MXRA8Q9BRK3 442 aa12.17□□□□□ -0.46
IDH3A-201ENST00000299518 DNAJC12Q9UKB3 198 aa12.17□□□□□ -0.46
IDH3A-201ENST00000299518 ZNRF3Q9ULT6 936 aa12.17□□□□□ -0.46
IDH3A-201ENST00000299518 MRPL11Q9Y3B7 192 aaKnown RBP12.17□□□□□ -0.46
IDH3A-201ENST00000299518 ATMINO43313 823 aaPredicted RBP12.17□□□□□ -0.46
IDH3A-201ENST00000299518 KRT14P02533 472 aa12.17□□□□□ -0.46
IDH3A-201ENST00000299518 CAPN2P17655 700 aa12.17□□□□□ -0.46
IDH3A-201ENST00000299518 FMO5P49326 533 aa12.17□□□□□ -0.46
IDH3A-201ENST00000299518 SH2D3CQ8N5H7 860 aa12.17□□□□□ -0.46
IDH3A-201ENST00000299518 ARHGEF26Q96DR7 871 aa12.17□□□□□ -0.46
IDH3A-201ENST00000299518 GPR88Q9GZN0 384 aa12.17□□□□□ -0.46
IDH3A-201ENST00000299518 CEP104O60308 925 aa12.17□□□□□ -0.46
IDH3A-201ENST00000299518 PTGER2P43116 358 aa12.17□□□□□ -0.46
IDH3A-201ENST00000299518 PPP3CAQ08209 521 aa12.17□□□□□ -0.46
IDH3A-201ENST00000299518 TEKT3Q9BXF9 490 aa12.17□□□□□ -0.46
IDH3A-201ENST00000299518 RBBP6Q7Z6E9 1792 aaKnown RBP12.16□□□□□ -0.46
IDH3A-201ENST00000299518 FOXN3O00409 490 aaPredicted RBP12.16□□□□□ -0.46
IDH3A-201ENST00000299518 BACH1O14867 736 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 HEXIM1O94992 359 aaKnown RBP12.16□□□□□ -0.46
IDH3A-201ENST00000299518 PEX3P56589 373 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 MEI1Q5TIA1 1274 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 TAF3Q5VWG9 929 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 PHLDB2Q86SQ0 1253 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 ARHGEF19Q8IW93 802 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 CCDC127Q96BQ5 260 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 ATG4CQ96DT6 458 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 GBP3Q9H0R5 595 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 DDX47Q9H0S4 455 aaKnown RBP12.16□□□□□ -0.46
IDH3A-201ENST00000299518 OLFML3Q9NRN5 406 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 TOPORSQ9NS56 1045 aaPredicted RBP12.16□□□□□ -0.46
IDH3A-201ENST00000299518 LCMT1Q9UIC8 334 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 TCP1P17987 556 aaKnown RBP12.16□□□□□ -0.46
IDH3A-201ENST00000299518 PAFAH1B1P43034 410 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 GALCP54803 685 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 ZNF211Q13398 564 aaPredicted RBP12.16□□□□□ -0.46
IDH3A-201ENST00000299518 TKFCQ3LXA3 575 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 HSP90B2PQ58FF3 399 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 ARL8AQ96BM9 186 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 TEPSINQ96N21 525 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 CELF4Q9BZC1 486 aaKnown RBP12.16□□□□□ -0.46
IDH3A-201ENST00000299518 RAD51CO43502 376 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 CCNE2O96020 404 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 PSMC2P35998 433 aaKnown RBP12.16□□□□□ -0.46
IDH3A-201ENST00000299518 PPP4R3CPQ6ZMV5 832 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 SUPT20HQ8NEM7 779 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 SYTL5Q8TDW5 730 aaPredicted RBP12.16□□□□□ -0.46
IDH3A-201ENST00000299518 AENQ8WTP8 325 aaKnown RBP12.16□□□□□ -0.46
IDH3A-201ENST00000299518 NACC1Q96RE7 527 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 STIM2Q9P246 746 aa12.16□□□□□ -0.46
IDH3A-201ENST00000299518 VCAM1P19320 739 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 SSTR3P32745 418 aaPredicted RBP12.15□□□□□ -0.46
IDH3A-201ENST00000299518 JAM2P57087 298 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 MTMR1Q13613 665 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 TRIM31Q9BZY9 425 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 FRMPD4Q14CM0 1322 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 EMSYQ7Z589 1322 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 F8VZ95 297 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 ASNSP08243 561 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 RPL13P26373 211 aaKnown RBP12.15□□□□□ -0.46
IDH3A-201ENST00000299518 FSTL1Q12841 308 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 BMT2Q1RMZ1 405 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 C2CD6Q53TS8 623 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 LMBRD2Q68DH5 695 aaPredicted RBP12.15□□□□□ -0.46
IDH3A-201ENST00000299518 DAAM2Q86T65 1068 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 MMGT1Q8N4V1 131 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 METTL13Q8N6R0 699 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 INPP4AQ96PE3 977 aaPredicted RBP12.15□□□□□ -0.46
IDH3A-201ENST00000299518 TUFT1Q9NNX1 390 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 PPP1R9AQ9ULJ8 1098 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 TMEM110-MUSTN1A8MSY1 372 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 ICAM1P05362 532 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 RARRES1P49788 294 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 PRPF4BQ13523 1007 aaKnown RBP12.15□□□□□ -0.46
IDH3A-201ENST00000299518 EPC2Q52LR7 807 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 SCARA3Q6AZY7 606 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 CASKIN2Q8WXE0 1202 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 BTBD6Q96KE9 485 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 THAP2Q9H0W7 228 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 RPAP3Q9H6T3 665 aaPredicted RBP12.15□□□□□ -0.46
IDH3A-201ENST00000299518 LRRC4CQ9HCJ2 640 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 PCDHGC5Q9Y5F6 944 aa12.15□□□□□ -0.46
IDH3A-201ENST00000299518 FER1L6Q2WGJ9 1857 aa12.15□□□□□ -0.47
IDH3A-201ENST00000299518 EIF3JO75822 258 aaKnown RBP12.14□□□□□ -0.47
IDH3A-201ENST00000299518 CFAP221Q4G0U5 840 aa12.14□□□□□ -0.47
IDH3A-201ENST00000299518 FAM102BQ5T8I3 360 aa12.14□□□□□ -0.47
IDH3A-201ENST00000299518 B3GNT9Q6UX72 402 aa12.14□□□□□ -0.47
IDH3A-201ENST00000299518 RTKN2Q8IZC4 609 aa12.14□□□□□ -0.47
IDH3A-201ENST00000299518 OR2W6PQ8NHA6 318 aa12.14□□□□□ -0.47
IDH3A-201ENST00000299518 RMDN3Q96TC7 470 aa12.14□□□□□ -0.47
IDH3A-201ENST00000299518 EDEM3Q9BZQ6 932 aa12.14□□□□□ -0.47
IDH3A-201ENST00000299518 UBE2TQ9NPD8 197 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms