RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 MEX3CQ5U5Q3 659 aaKnown RBP3.26□□□□□ -1.89
HERC4-201ENST00000277817 ANO1Q5XXA6 986 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 RCC1LQ96I51 464 aaKnown RBP3.26□□□□□ -1.89
HERC4-201ENST00000277817 UBAC1Q9BSL1 405 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.26□□□□□ -1.89
HERC4-201ENST00000277817 CEP72Q9P209 647 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 ODF2LQ9ULJ1 636 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 ALPK3Q96L96 1907 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 BIN1O00499 593 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 ZNF213O14771 459 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 GADD45BO75293 160 aaPredicted RBP3.26□□□□□ -1.89
HERC4-201ENST00000277817 CPA1P15085 419 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 DCAF7P61962 342 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 RAB3GAP1Q15042 981 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 ZNF423Q2M1K9 1284 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 FILIP1LQ4L180 1135 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 ISM2Q6H9L7 571 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 FAM180BQ6P0A1 224 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 TATDN1Q6P1N9 297 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 TXNDC11Q6PKC3 985 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 LMBR1LQ6UX01 489 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 RTL10Q7L3V2 364 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 DPP9Q86TI2 863 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 DIS3LQ8TF46 1054 aaKnown RBP3.26□□□□□ -1.89
HERC4-201ENST00000277817 XAGE3Q8WTP9 111 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 C8orf76Q96K31 380 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 NEK1Q96PY6 1258 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 TRPV4Q9HBA0 871 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 DMRT3Q9NQL9 472 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.26□□□□□ -1.89
HERC4-201ENST00000277817 TMOD3Q9NYL9 352 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 TRMT112Q9UI30 125 aaKnown RBP3.26□□□□□ -1.89
HERC4-201ENST00000277817 SOX13Q9UN79 622 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 PLXNB2O15031 1838 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 PARP14Q460N5 1801 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 A0A087WV62 115 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 TLR3O15455 904 aaKnown RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 CDKL5O76039 1030 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 HTR3BO95264 441 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 ITGAVP06756 1048 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 SLC3A2P08195 630 aaKnown RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 ZSCAN22P10073 491 aaPredicted RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 EDN3P14138 238 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 XPAP23025 273 aaPredicted RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 PDIA3P30101 505 aaKnown RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 GFRA1P56159 465 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 UBE2HP62256 183 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 IKQ13123 557 aaPredicted RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 SKIDA1Q1XH10 827 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 CFAP100Q494V2 611 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 LRSAM1Q6UWE0 723 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 VASH1Q7L8A9 365 aaPredicted RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 OVCH1Q7RTY7 1134 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 HERC6Q8IVU3 1022 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 CCDC144CPQ8IYA2 1237 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 GRIN3AQ8TCU5 1115 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 BRI3BPQ8WY22 251 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 BRF1Q92994 677 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 HSPBAP1Q96EW2 488 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 HSH2DQ96JZ2 352 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 ADAM19Q9H013 955 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 NDFIP2Q9NV92 336 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 GRM8O00222 908 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 RRP9O43818 475 aaKnown RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 AOC2O75106 756 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 OFD1O75665 1012 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 SLITRK5O94991 958 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 SNRPA1P09661 255 aaKnown RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 CHMLP26374 656 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 MAP4K2Q12851 820 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 PTPN21Q16825 1174 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 NRN1LQ496H8 165 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 MAMDC2Q7Z304 686 aaPredicted RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 CCDC116Q8IYX3 515 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 STT3BQ8TCJ2 826 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 PI4K2AQ9BTU6 479 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 AGXT2Q9BYV1 514 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 BTBD1Q9H0C5 482 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 TRMT1Q9NXH9 659 aaKnown RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 APEX2Q9UBZ4 518 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 CLIP2Q9UDT6 1046 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 RBM8AQ9Y5S9 174 aaKnown RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 CEMIPQ8WUJ3 1361 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 H3BRJ5 948 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 TMEM63AO94886 807 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 PGM3O95394 542 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 SGPL1O95470 568 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 A1BGP04217 495 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 KRT1P04264 644 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 IGHMBP2P38935 993 aaKnown RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 PMS1P54277 932 aaKnown RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 HTRA4P83105 476 aaPredicted RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 SFSWAPQ12872 951 aaKnown RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 MEA1Q16626 185 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 SPRED3Q2MJR0 410 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 HSP90B2PQ58FF3 399 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 VARS2Q5ST30 1063 aaKnown RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 KRT74Q7RTS7 529 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 CPOQ8IVL8 374 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 TRIM59Q8IWR1 403 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms