RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 MMEP08473 750 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 HOXA13P31271 388 aaPredicted RBP19.48■□□□□ 0.71
TRAF4-201ENST00000262395 CYP2J2P51589 502 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 ARHGAP4P98171 946 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 GABPAQ06546 454 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 SPIRE1Q08AE8 756 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 NBPF9Q3BBW0 867 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 RNF25Q96BH1 459 aaPredicted RBP19.48■□□□□ 0.71
TRAF4-201ENST00000262395 TBC1D31Q96DN5 1066 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 PDXKO00764 312 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 TBCAO75347 108 aaKnown RBP19.48■□□□□ 0.71
TRAF4-201ENST00000262395 PLS1Q14651 629 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 EPM2AIP1Q7L775 607 aaPredicted RBP19.48■□□□□ 0.71
TRAF4-201ENST00000262395 CTNNBL1Q8WYA6 563 aaPredicted RBP19.48■□□□□ 0.71
TRAF4-201ENST00000262395 CHMP6Q96FZ7 201 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 ACTR5Q9H9F9 607 aaPredicted RBP19.48■□□□□ 0.71
TRAF4-201ENST00000262395 GGA2Q9UJY4 613 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 NENFQ9UMX5 172 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 TNRC6CQ9HCJ0 1690 aaKnown RBP19.48■□□□□ 0.71
TRAF4-201ENST00000262395 CNTNAP4Q9C0A0 1308 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 COL16A1Q07092 1604 aaPredicted RBP19.48■□□□□ 0.71
TRAF4-201ENST00000262395 FAM86B1E9PN63 330 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 CHMP2AO43633 222 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 FAM86B2P0C5J1 330 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 MARCKSL1P49006 195 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 CACNB3P54284 484 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 CTTNQ14247 550 aaKnown RBP19.48■□□□□ 0.71
TRAF4-201ENST00000262395 SLC29A2Q14542 456 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 SYT2Q8N9I0 419 aaPredicted RBP19.48■□□□□ 0.71
TRAF4-201ENST00000262395 EPB41L4BQ9H329 900 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 COG5Q9UP83 839 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 PITPNM2Q9BZ72 1349 aa19.48■□□□□ 0.71
TRAF4-201ENST00000262395 ARFGEF1Q9Y6D6 1849 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 IGKV6D-41A0A0C4DH26 115 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 SHMT1P34896 483 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 PLCB4Q15147 1175 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 PPP1R18Q6NYC8 613 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 FAM186BQ8IYM0 893 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 KIRREL3Q8IZU9 778 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 OLIG1Q8TAK6 271 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 CCT6BQ92526 530 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 SEMA4AQ9H3S1 761 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 TYW1Q9NV66 732 aaKnown RBP19.47■□□□□ 0.71
TRAF4-201ENST00000262395 TGFB1I1O43294 461 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 FGFR4P22455 802 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 PMS2P54278 862 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 IKQ13123 557 aaPredicted RBP19.47■□□□□ 0.71
TRAF4-201ENST00000262395 CBWD6Q4V339 395 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 CBWD3Q5JTY5 395 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 CBWD5Q5RIA9 395 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 ERP44Q9BS26 406 aa19.47■□□□□ 0.71
TRAF4-201ENST00000262395 CCNL1Q9UK58 526 aaPredicted RBP19.47■□□□□ 0.71
TRAF4-201ENST00000262395 THRAP3Q9Y2W1 955 aaKnown RBP19.47■□□□□ 0.71
TRAF4-201ENST00000262395 MEIS2O14770 477 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 PPFIA2O75334 1257 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 FERP16591 822 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 SOX5P35711 763 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 PPP1R7Q15435 360 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 FAM133BQ5BKY9 247 aaKnown RBP19.46■□□□□ 0.71
TRAF4-201ENST00000262395 ERMARDQ5T6L9 678 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 HIBCHQ6NVY1 386 aaPredicted RBP19.46■□□□□ 0.71
TRAF4-201ENST00000262395 ZFPM1Q8IX07 1006 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 LRRC34Q8IZ02 419 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 MYCT1Q8N699 235 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 ETNPPLQ8TBG4 499 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 SGSM3Q96HU1 749 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 ELAC2Q9BQ52 826 aaKnown RBP19.46■□□□□ 0.71
TRAF4-201ENST00000262395 USP40Q9NVE5 1235 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 SPATA31A5Q5VU36 1347 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 SPATA31A7Q8IWB4 1347 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 C5orf60A6NFR6 353 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 EML1O00423 815 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 CLGNO14967 610 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 RPL13P26373 211 aaKnown RBP19.46■□□□□ 0.71
TRAF4-201ENST00000262395 PTENP60484 403 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 DRP2Q13474 957 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 ZNF746Q6NUN9 644 aaPredicted RBP19.46■□□□□ 0.71
TRAF4-201ENST00000262395 JAMLQ86YT9 394 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 EPS8L3Q8TE67 593 aaKnown RBP19.46■□□□□ 0.71
TRAF4-201ENST00000262395 RFFLQ8WZ73 363 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 KRT35Q92764 455 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 N4BP2L2Q92802 583 aaPredicted RBP19.46■□□□□ 0.71
TRAF4-201ENST00000262395 TLCD1Q96CP7 247 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 PRMT1Q99873 361 aaKnown RBP19.46■□□□□ 0.71
TRAF4-201ENST00000262395 ZDHHC18Q9NUE0 388 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 BAIAP2L1Q9UHR4 511 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 PTPN22Q9Y2R2 807 aa19.46■□□□□ 0.71
TRAF4-201ENST00000262395 COL5A3P25940 1745 aaPredicted RBP19.46■□□□□ 0.71
TRAF4-201ENST00000262395 SRRM3A6NNA2 597 aaPredicted RBP19.45■□□□□ 0.7
TRAF4-201ENST00000262395 VIMP08670 466 aaKnown RBP19.45■□□□□ 0.7
TRAF4-201ENST00000262395 HOXA7P31268 230 aaPredicted RBP19.45■□□□□ 0.7
TRAF4-201ENST00000262395 TCP10Q12799 353 aa19.45■□□□□ 0.7
TRAF4-201ENST00000262395 DENND2CQ68D51 928 aa19.45■□□□□ 0.7
TRAF4-201ENST00000262395 DUPD1Q68J44 220 aa19.45■□□□□ 0.7
TRAF4-201ENST00000262395 CCDC25Q86WR0 208 aa19.45■□□□□ 0.7
TRAF4-201ENST00000262395 SLC30A5Q8TAD4 765 aa19.45■□□□□ 0.7
TRAF4-201ENST00000262395 RAB17Q9H0T7 212 aa19.45■□□□□ 0.7
TRAF4-201ENST00000262395 ODF2LQ9ULJ1 636 aa19.45■□□□□ 0.7
TRAF4-201ENST00000262395 RPSAP08865 295 aaKnown RBP19.45■□□□□ 0.7
TRAF4-201ENST00000262395 IL1R1P14778 569 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms