RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 IPO5O00410 1097 aaKnown RBP13.05□□□□□ -0.32
SPG11-201ENST00000261866 BLVRAP53004 296 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 CROCCP2Q86T23 111 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 MGEA5O60502 916 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 NCF2P19878 526 aaPredicted RBP13.05□□□□□ -0.32
SPG11-201ENST00000261866 MUM1Q2TAK8 710 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 MB21D1Q8N884 522 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 BEST2Q8NFU1 509 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 SPON2Q9BUD6 331 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 ZCWPW1Q9H0M4 648 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 OSBPL3Q9H4L5 887 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 CRB1P82279 1406 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 PPFIA4O75335 1185 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 PRR5LQ6MZQ0 368 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 DGKHQ86XP1 1220 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 CAPS2Q9BXY5 557 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 KLHL8Q9P2G9 620 aaPredicted RBP13.04□□□□□ -0.32
SPG11-201ENST00000261866 DFFAO00273 331 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 LMNTD2Q8IXW0 634 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 RNF25Q96BH1 459 aaPredicted RBP13.04□□□□□ -0.32
SPG11-201ENST00000261866 NUDCD1Q96RS6 583 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 THAP9Q9H5L6 903 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 KLHL11Q9NVR0 708 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 FBXO40Q9UH90 709 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 INTUQ9ULD6 942 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 GSG1L2A8MUP6 293 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 GNGT2O14610 69 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 GSTA4O15217 222 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 CFLARO15519 480 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 CIITAP33076 1130 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 GRIK1P39086 918 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 AP1B1Q10567 949 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 RNF149Q8NC42 400 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 FSD1LQ9BXM9 530 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 CAPN7Q9Y6W3 813 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 IQCA1LA6NCM1 817 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 RECQLP46063 649 aaPredicted RBP13.04□□□□□ -0.32
SPG11-201ENST00000261866 AP3B2Q13367 1082 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 ZNF211Q13398 564 aaPredicted RBP13.04□□□□□ -0.32
SPG11-201ENST00000261866 TRIM67Q6ZTA4 783 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 EIF2AK1Q9BQI3 630 aaKnown RBP13.04□□□□□ -0.32
SPG11-201ENST00000261866 ADAM22Q9P0K1 906 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 ABCC3O15438 1527 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 TRIM49P0CI25 452 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 TRIM49CP0CI26 452 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 GMPSP49915 693 aaPredicted RBP13.04□□□□□ -0.32
SPG11-201ENST00000261866 DBN1Q16643 649 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.04□□□□□ -0.321e-8■■■■■ 58.8
SPG11-201ENST00000261866 TOPORSQ9NS56 1045 aaPredicted RBP13.04□□□□□ -0.32
SPG11-201ENST00000261866 UBE4BO95155 1302 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 A8MXQ7 604 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 HADHAP40939 763 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 LIFRP42702 1097 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 DDX53Q86TM3 631 aaKnown RBP13.04□□□□□ -0.32
SPG11-201ENST00000261866 N4BP2L2Q92802 583 aaPredicted RBP13.04□□□□□ -0.32
SPG11-201ENST00000261866 ZNRF3Q9ULT6 936 aa13.04□□□□□ -0.32
SPG11-201ENST00000261866 GOLGA8KD6RF30 607 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 DHX9Q08211 1270 aaKnown RBP13.03□□□□□ -0.32
SPG11-201ENST00000261866 KCNH4Q9UQ05 1017 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 CCDC195A0A1B0GUA6 201 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 PHEXP78562 749 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 TARBP1Q13395 1621 aaKnown RBP13.03□□□□□ -0.32
SPG11-201ENST00000261866 PRCPP42785 496 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 BBOF1Q8ND07 529 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 PGRMC1O00264 195 aaKnown RBP13.03□□□□□ -0.32
SPG11-201ENST00000261866 POLRMTO00411 1230 aaKnown RBP13.03□□□□□ -0.32
SPG11-201ENST00000261866 ESRRBO95718 433 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 CLTAP09496 248 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 KITP10721 976 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 MXD4Q14582 209 aaPredicted RBP13.03□□□□□ -0.32
SPG11-201ENST00000261866 GIMAP8Q8ND71 665 aaPredicted RBP13.03□□□□□ -0.32
SPG11-201ENST00000261866 GCOM2Q9BZD3 368 aaPredicted RBP13.03□□□□□ -0.32
SPG11-201ENST00000261866 SUGT1Q9Y2Z0 365 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 HIP1RO75146 1068 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 GRM4Q14833 912 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 FRA10AC1Q70Z53 315 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 RASSF4Q9H2L5 321 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 CNOT8Q9UFF9 292 aaKnown RBP13.03□□□□□ -0.32
SPG11-201ENST00000261866 SPATA31E1Q6ZUB1 1445 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 RARBP10826 455 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 QARSP47897 775 aaKnown RBP13.03□□□□□ -0.32
SPG11-201ENST00000261866 TTC1Q99614 292 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 SLC9A2Q9UBY0 812 aa13.03□□□□□ -0.32
SPG11-201ENST00000261866 FOXN1O15353 648 aa13.02□□□□□ -0.32
SPG11-201ENST00000261866 SART1O43290 800 aaKnown RBP13.02□□□□□ -0.32
SPG11-201ENST00000261866 MRFAP1L1Q96HT8 127 aa13.02□□□□□ -0.32
SPG11-201ENST00000261866 C2CD2LO14523 706 aa13.02□□□□□ -0.32
SPG11-201ENST00000261866 MT-ND3P03897 115 aa13.02□□□□□ -0.32
SPG11-201ENST00000261866 SURF1Q15526 300 aa13.02□□□□□ -0.32
SPG11-201ENST00000261866 TOGARAM2Q6ZUX3 1019 aa13.02□□□□□ -0.32
SPG11-201ENST00000261866 PACSIN2Q9UNF0 486 aaPredicted RBP13.02□□□□□ -0.32
SPG11-201ENST00000261866 DAGLAQ9Y4D2 1042 aa13.02□□□□□ -0.32
SPG11-201ENST00000261866 KRT10P13645 584 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 HUNKP57058 714 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 STX1BP61266 288 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 ETF1P62495 437 aaKnown RBP13.02□□□□□ -0.33
SPG11-201ENST00000261866 BAATQ14032 418 aaPredicted RBP13.02□□□□□ -0.33
SPG11-201ENST00000261866 TSNAXIP1Q2TAA8 658 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 FAM133BQ5BKY9 247 aaKnown RBP13.02□□□□□ -0.33
SPG11-201ENST00000261866 RESP18Q5W5W9 173 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms