RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 SRRDQ9UH36 339 aa19.39■□□□□ 0.7
SSB-201ENST00000260956 GUCA1BQ9UMX6 200 aa19.39■□□□□ 0.7
SSB-201ENST00000260956 PTPN22Q9Y2R2 807 aa19.39■□□□□ 0.7
SSB-201ENST00000260956 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.39■□□□□ 0.7
SSB-201ENST00000260956 WDR81Q562E7 1941 aa19.39■□□□□ 0.69
SSB-201ENST00000260956 PJA2O43164 708 aa19.39■□□□□ 0.69
SSB-201ENST00000260956 TBCAO75347 108 aaKnown RBP19.39■□□□□ 0.69
SSB-201ENST00000260956 AKAP3O75969 853 aa19.39■□□□□ 0.69
SSB-201ENST00000260956 GUCY2CP25092 1073 aa19.39■□□□□ 0.69
SSB-201ENST00000260956 CCDC122Q5T0U0 273 aa19.39■□□□□ 0.69
SSB-201ENST00000260956 RRAGAQ7L523 313 aa19.39■□□□□ 0.69
SSB-201ENST00000260956 TPH2Q8IWU9 490 aa19.39■□□□□ 0.69
SSB-201ENST00000260956 GOLGA1Q92805 767 aa19.39■□□□□ 0.69
SSB-201ENST00000260956 LSM14BQ9BX40 385 aaKnown RBP19.39■□□□□ 0.69
SSB-201ENST00000260956 EPC1Q9H2F5 836 aa19.39■□□□□ 0.69
SSB-201ENST00000260956 ZHX3Q9H4I2 956 aa19.39■□□□□ 0.69
SSB-201ENST00000260956 AGO4Q9HCK5 861 aaKnown RBP19.39■□□□□ 0.69
SSB-201ENST00000260956 MAP3K20Q9NYL2 800 aaKnown RBP19.39■□□□□ 0.69
SSB-201ENST00000260956 PTCH2Q9Y6C5 1203 aa19.39■□□□□ 0.69
SSB-201ENST00000260956 NR3C1P04150 777 aa19.38■□□□□ 0.69
SSB-201ENST00000260956 FLT3LGP49771 235 aa19.38■□□□□ 0.69
SSB-201ENST00000260956 APBA1Q02410 837 aa19.38■□□□□ 0.69
SSB-201ENST00000260956 TKFCQ3LXA3 575 aa19.38■□□□□ 0.69
SSB-201ENST00000260956 MCF2L2Q86YR7 1114 aa19.38■□□□□ 0.69
SSB-201ENST00000260956 CEP112Q8N8E3 955 aa19.38■□□□□ 0.69
SSB-201ENST00000260956 NACC1Q96RE7 527 aa19.38■□□□□ 0.69
SSB-201ENST00000260956 LXNQ9BS40 222 aa19.38■□□□□ 0.69
SSB-201ENST00000260956 KCNH7Q9NS40 1196 aa19.38■□□□□ 0.69
SSB-201ENST00000260956 SEL1LQ9UBV2 794 aa19.38■□□□□ 0.69
SSB-201ENST00000260956 ODF2LQ9ULJ1 636 aa19.38■□□□□ 0.69
SSB-201ENST00000260956 MGAMO43451 1857 aa19.38■□□□□ 0.69
SSB-201ENST00000260956 ATP2A1O14983 1001 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 CHMP4BP1P59074 171 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 KCNH2Q12809 1159 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 SNRNP48Q6IEG0 339 aaKnown RBP19.37■□□□□ 0.69
SSB-201ENST00000260956 MSANTD4Q8NCY6 345 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 EHBP1Q8NDI1 1231 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 ARID3AQ99856 593 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 PLCB1Q9NQ66 1216 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 JADE2Q9NQC1 790 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 OGFRQ9NZT2 677 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 DUSP10Q9Y6W6 482 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 KRT86O43790 486 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 CALUO43852 315 aaPredicted RBP19.37■□□□□ 0.69
SSB-201ENST00000260956 ZBED4O75132 1171 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 LYPLA2O95372 231 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 ATP1A1P05023 1023 aaKnown RBP19.37■□□□□ 0.69
SSB-201ENST00000260956 MAPK4P31152 587 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 CASP4P49662 377 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 MORN1Q5T089 497 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 TEX35Q5T0J7 233 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 WDR78Q5VTH9 848 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 KIAA1328Q86T90 577 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 NCAPG2Q86XI2 1143 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 RIOX2Q8IUF8 465 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 USP6NLQ92738 828 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 SLC35C1Q96A29 364 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 CCDC42Q96M95 316 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 TEX13BQ9BXU2 312 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 NUCKS1Q9H1E3 243 aaKnown RBP19.37■□□□□ 0.69
SSB-201ENST00000260956 IKZF4Q9H2S9 585 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 ANKZF1Q9H8Y5 726 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 POLD4Q9HCU8 107 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 SIX2Q9NPC8 291 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 DMAC2Q9NW81 257 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 AIPL1Q9NZN9 384 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 MYO6Q9UM54 1294 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 FHOD1Q9Y613 1164 aa19.37■□□□□ 0.69
SSB-201ENST00000260956 PLXNB2O15031 1838 aa19.36■□□□□ 0.69
SSB-201ENST00000260956 ANO9A1A5B4 782 aa19.36■□□□□ 0.69
SSB-201ENST00000260956 GCNT3O95395 438 aa19.36■□□□□ 0.69
SSB-201ENST00000260956 NMT1P30419 496 aaKnown RBP19.36■□□□□ 0.69
SSB-201ENST00000260956 CCNA1P78396 465 aa19.36■□□□□ 0.69
SSB-201ENST00000260956 FBXO46Q6PJ61 603 aaPredicted RBP19.36■□□□□ 0.69
SSB-201ENST00000260956 PLEKHH3Q7Z736 793 aa19.36■□□□□ 0.69
SSB-201ENST00000260956 PARVGQ9HBI0 331 aa19.36■□□□□ 0.69
SSB-201ENST00000260956 ARMCX3Q9UH62 379 aaPredicted RBP19.36■□□□□ 0.69
SSB-201ENST00000260956 PCDHA13Q9Y5I0 950 aa19.36■□□□□ 0.69
SSB-201ENST00000260956 ARID2Q68CP9 1835 aa19.35■□□□□ 0.69
SSB-201ENST00000260956 FAM13AO94988 1023 aa19.35■□□□□ 0.69
SSB-201ENST00000260956 GNRH1P01148 92 aa19.35■□□□□ 0.69
SSB-201ENST00000260956 ALAS1P13196 640 aa19.35■□□□□ 0.69
SSB-201ENST00000260956 ZNF720Q7Z2F6 126 aa19.35■□□□□ 0.69
SSB-201ENST00000260956 TSGA10Q9BZW7 698 aa19.35■□□□□ 0.69
SSB-201ENST00000260956 SFI1A8K8P3 1242 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 FDX1P10109 184 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 RPS6P62753 249 aaKnown RBP19.34■□□□□ 0.69
SSB-201ENST00000260956 PGM5Q15124 567 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 TNS4Q8IZW8 715 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 BANK1Q8NDB2 785 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 SHCBP1Q8NEM2 672 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 TAAR1Q96RJ0 339 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 CRACR2AQ9BSW2 395 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 IFIH1Q9BYX4 1025 aaKnown RBP19.34■□□□□ 0.69
SSB-201ENST00000260956 HOMER2Q9NSB8 354 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 HDAC6Q9UBN7 1215 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 DBR1Q9UK59 544 aaKnown RBP19.34■□□□□ 0.69
SSB-201ENST00000260956 FBXL5Q9UKA1 691 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 RAB21Q9UL25 225 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 PNMA2Q9UL42 364 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms