RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ADD2P35612 726 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 PPP2R2AP63151 447 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 PPP2R5CQ13362 524 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 KRT32Q14532 448 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 ALFQ53S48 1182 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 PCNX4Q63HM2 1172 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 TMTC3Q6ZXV5 915 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 HEATR4Q86WZ0 1026 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 REXO1L1PQ8IX06 675 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 AIFM2Q9BRQ8 373 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 SEZ6LQ9BYH1 1024 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 DDX18Q9NVP1 670 aaKnown RBP7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 PACSIN2Q9UNF0 486 aaPredicted RBP7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 HPS5Q9UPZ3 1129 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 STON1Q9Y6Q2 735 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 NEXMIFQ5QGS0 1516 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 DPPA5A6NC42 116 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 PFKFB2O60825 505 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 HAUS5O94927 633 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 IFNAR2P48551 515 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 KCTD2Q14681 263 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 BBS9Q3SYG4 887 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 ATAD3BQ5T9A4 648 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 CORO6Q6QEF8 472 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 TRPM8Q7Z2W7 1104 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 KRT73Q86Y46 540 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 MYCBPAPQ8TBZ2 947 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 HPS1Q92902 700 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 MAP3K14Q99558 947 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 HNRNPABQ99729 332 aaKnown RBP7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 ACAT2Q9BWD1 397 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 DAPK2Q9UIK4 370 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 CBY1Q9Y3M2 126 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 CDC42BPGQ6DT37 1551 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 VWDEQ8N2E2 1590 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 PI4KAP2A4QPH2 592 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 EVPLLA8MZ36 301 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 DNALI1O14645 258 aaPredicted RBP7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 MTX1Q13505 466 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 ANGPT1Q15389 498 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 ERICH1Q86X53 443 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 ANKRD44Q8N8A2 993 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 PI4KAP1Q8N8J0 262 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 CDKL2Q92772 493 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 CNBD2Q96M20 576 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 HAUS4Q9H6D7 363 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 CCDC177Q9NQR7 707 aaPredicted RBP7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 PHF24Q9UPV7 400 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 CFAP65Q6ZU64 1925 aaKnown RBP7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 SPTLC1O15269 473 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 IFNA16P05015 189 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 KRT16P08779 473 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 CYP4V2Q6ZWL3 525 aaPredicted RBP7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 RHOT2Q8IXI1 618 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 NEK9Q8TD19 979 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 POMGNT1Q8WZA1 660 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 NCLNQ969V3 563 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 CHAMP1Q96JM3 812 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 TANGO6Q9C0B7 1094 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 NOVA2Q9UNW9 492 aaKnown RBP7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 ZPR1O75312 459 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 ZNF3P17036 446 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 EIF3BP55884 814 aaKnown RBP7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 VSNL1P62760 191 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 RUNX1T1Q06455 604 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 PDAP1Q13442 181 aaKnown RBP7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 SLC7A5P1Q8MH63 180 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 RUBCNQ92622 972 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 TMEM245Q9H330 911 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 NRXN1Q9ULB1 1477 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 ATF6P18850 670 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 ATP6V1C1P21283 382 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 TCF7P36402 384 aaPredicted RBP7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 DEFA1P59665 94 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 DEFA3P59666 94 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 ITGA9Q13797 1035 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 KSR1Q8IVT5 923 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 SLC35F6Q8N357 371 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 PAIP1Q9H074 479 aaKnown RBP7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 TMEM60Q9H2L4 133 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 TAF1DQ9H5J8 278 aaPredicted RBP7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 TRPC5Q9UL62 973 aaPredicted RBP7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 VPS4AQ9UN37 437 aa7.2□□□□□ -1.26
PDGFRA-201ENST00000257290 MED14O60244 1454 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 A0A1W2PRG6 482 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 CHL1O00533 1208 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 MFN2O95140 757 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 RPL13P26373 211 aaKnown RBP7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 CASP14P31944 242 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 IL9RQ01113 521 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 AMPD3Q01432 767 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 PABPC4Q13310 644 aaKnown RBP eCLIP7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 ANKRD13DQ6ZTN6 518 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 GPR141Q7Z602 305 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 CSGALNACT2Q8N6G5 542 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 SENP1Q9P0U3 644 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 CTNNAL1Q9UBT7 734 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 HYOU1Q9Y4L1 999 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 TULP4Q9NRJ4 1543 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 MAP4P27816 1152 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms