RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 TRIML1Q8N9V2 468 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 TRPC4APQ8TEL6 797 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 DDX12PQ92771 950 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 LENG1Q96BZ8 264 aaPredicted RBP12.8□□□□□ -0.36
CCNA1-201ENST00000255465 KLRG1Q96E93 195 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 RRP36Q96EU6 259 aaKnown RBP12.8□□□□□ -0.36
CCNA1-201ENST00000255465 ABHD8Q96I13 439 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 RIOK1Q9BRS2 568 aaKnown RBP12.8□□□□□ -0.36
CCNA1-201ENST00000255465 NSRP1Q9H0G5 558 aaKnown RBP12.8□□□□□ -0.36
CCNA1-201ENST00000255465 RNPEPL1Q9HAU8 725 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 ANGEL1Q9UNK9 670 aaKnown RBP12.8□□□□□ -0.36
CCNA1-201ENST00000255465 NAV1Q8NEY1 1877 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 MAGEB6P1A0A0J9YX57 407 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 HTR3EA5X5Y0 456 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 TTI1O43156 1089 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 USP2O75604 605 aaPredicted RBP12.8□□□□□ -0.36
CCNA1-201ENST00000255465 HNRNPCP07910 306 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCNA1-201ENST00000255465 ADCK5Q3MIX3 580 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 SH3BP5LQ7L8J4 393 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 CATIPQ7Z7H3 387 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 RNF10Q8N5U6 811 aaKnown RBP12.8□□□□□ -0.36
CCNA1-201ENST00000255465 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCNA1-201ENST00000255465 NEK9Q8TD19 979 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 NOC3LQ8WTT2 800 aaKnown RBP12.8□□□□□ -0.36
CCNA1-201ENST00000255465 TGFBRAP1Q8WUH2 860 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 SREK1Q8WXA9 508 aaKnown RBP12.8□□□□□ -0.36
CCNA1-201ENST00000255465 CLMNQ96JQ2 1002 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 RNF14Q9UBS8 474 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 SIPA1L1O43166 1804 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 A0A087WWV3 80 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 DDTLA6NHG4 134 aaPredicted RBP12.79□□□□□ -0.36
CCNA1-201ENST00000255465 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.79□□□□□ -0.36
CCNA1-201ENST00000255465 GCOM1H8Y6P7 765 aaPredicted RBP12.79□□□□□ -0.36
CCNA1-201ENST00000255465 ZBED4O75132 1171 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 ASLP04424 464 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 ALDH2P05091 517 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 MYZAPP0CAP1 466 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 SKIP12755 728 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 TCF7P36402 384 aaPredicted RBP12.79□□□□□ -0.36
CCNA1-201ENST00000255465 RFC5P40937 340 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 TUBP50607 506 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 PARP6Q2NL67 630 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 GALNTL6Q49A17 601 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 CYP4F22Q6NT55 531 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 PACS1Q6VY07 963 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 ZSCAN29Q8IWY8 852 aaPredicted RBP12.79□□□□□ -0.36
CCNA1-201ENST00000255465 RETREG2Q8NC44 543 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 RBBP8NLQ8NC74 664 aaPredicted RBP12.79□□□□□ -0.36
CCNA1-201ENST00000255465 LINC00301Q8NCQ3 95 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 DEPTORQ8TB45 409 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 DNAJC9Q8WXX5 260 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 RAPGEF5Q92565 580 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 ITPKCQ96DU7 683 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 TUBGCP5Q96RT8 1024 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 CENPKQ9BS16 269 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.79□□□□□ -0.36
CCNA1-201ENST00000255465 HESX1Q9UBX0 185 aa12.79□□□□□ -0.36
CCNA1-201ENST00000255465 LUC7L2Q9Y383 392 aaKnown RBP12.79□□□□□ -0.36
CCNA1-201ENST00000255465 COL2A1P02458 1487 aaPredicted RBP12.78□□□□□ -0.36
CCNA1-201ENST00000255465 CETN3O15182 167 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 MMEP08473 750 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 PDGFRBP09619 1106 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 PORP16435 677 aaPredicted RBP12.78□□□□□ -0.36
CCNA1-201ENST00000255465 HSPA9P38646 679 aaKnown RBP12.78□□□□□ -0.36
CCNA1-201ENST00000255465 VEGFBP49765 207 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 NCALDP61601 193 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 RCN1Q15293 331 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 LDLRAD1Q5T700 205 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 RNF220Q5VTB9 566 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 WDR78Q5VTH9 848 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 KCTD16Q68DU8 428 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 RGMBQ6NW40 437 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 NANOGNBQ7Z5D8 188 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 GSPT2Q8IYD1 628 aaKnown RBP12.78□□□□□ -0.36
CCNA1-201ENST00000255465 PPP1R14CQ8TAE6 165 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 CCDC43Q96MW1 224 aaKnown RBP12.78□□□□□ -0.36
CCNA1-201ENST00000255465 SPATA16Q9BXB7 569 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 OCEL1Q9H607 264 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 CCDC134Q9H6E4 229 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 GDF3Q9NR23 364 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 ATRNL1Q5VV63 1379 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 FLT1P17948 1338 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 MYPNQ86TC9 1320 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 RNF113AO15541 343 aaKnown RBP12.78□□□□□ -0.36
CCNA1-201ENST00000255465 ZFYP08048 801 aaPredicted RBP12.78□□□□□ -0.36
CCNA1-201ENST00000255465 CPA1P15085 419 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 ERCC5P28715 1186 aaPredicted RBP12.78□□□□□ -0.36
CCNA1-201ENST00000255465 IREB2P48200 963 aaKnown RBP12.78□□□□□ -0.36
CCNA1-201ENST00000255465 MTTPP55157 894 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 KRT83P78385 493 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 PLOD1Q02809 727 aaPredicted RBP12.78□□□□□ -0.36
CCNA1-201ENST00000255465 TOB2Q14106 344 aaPredicted RBP12.78□□□□□ -0.36
CCNA1-201ENST00000255465 CNPY1Q3B7I2 92 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 TRIM68Q6AZZ1 485 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 TMEM53Q6P2H8 277 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 MIGA2Q7L4E1 593 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 HOOK3Q86VS8 718 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 MAPKAPK5Q8IW41 473 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 LCORLQ8N3X6 602 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 SYT2Q8N9I0 419 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms