RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 PPP1R9AQ9ULJ8 1098 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 TP73O15350 636 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 TTI1O43156 1089 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 MCCD1P59942 119 aaPredicted RBP13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 DRP2Q13474 957 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 SLC15A2Q16348 729 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 CCDC174Q6PII3 467 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 LMO3Q8TAP4 145 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 CELF4Q9BZC1 486 aaKnown RBP13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 COG5Q9UP83 839 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 GMNCA6NCL1 334 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 TCEAL1Q15170 157 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 SFR1Q86XK3 245 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 RAPGEF5Q92565 580 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 VEZTQ9HBM0 779 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 ECM2O94769 699 aaPredicted RBP13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 PTENP60484 403 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 EXOC3L4Q17RC7 722 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 GPATCH4Q5T3I0 446 aaKnown RBP13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 CCT6BQ92526 530 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 STRA6Q9BX79 667 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 LUC7LQ9NQ29 371 aaKnown RBP13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 CHORDC1Q9UHD1 332 aaPredicted RBP13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 PCDHB13Q9Y5F0 798 aa13.01□□□□□ -0.33
SEC61A1-201ENST00000243253 TBX3O15119 743 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 CETN3O15182 167 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 CFBP00751 764 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 DRD4P21917 467 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 ATP2B4P23634 1241 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 QRICH1Q2TAL8 776 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 WLSQ5T9L3 541 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 ATXN2LQ8WWM7 1075 aaKnown RBP13□□□□□ -0.33
SEC61A1-201ENST00000243253 CENPTQ96BT3 561 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 RUSC1Q9BVN2 902 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 ANO3Q9BYT9 981 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 OLFML3Q9NRN5 406 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 BCCIPQ9P287 314 aaKnown RBP eCLIP13□□□□□ -0.33
SEC61A1-201ENST00000243253 NUDT17P0C025 328 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 CIITAP33076 1130 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 MRPL12P52815 198 aaKnown RBP13□□□□□ -0.33
SEC61A1-201ENST00000243253 HADHBP55084 474 aaKnown RBP13□□□□□ -0.33
SEC61A1-201ENST00000243253 PPP2R2AP63151 447 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 ANKRD20A8PQ5CZ79 823 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 ERMARDQ5T6L9 678 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 PALB2Q86YC2 1186 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 PIGOQ8TEQ8 1089 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 NCAPGQ9BPX3 1015 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 TYW1Q9NV66 732 aaKnown RBP13□□□□□ -0.33
SEC61A1-201ENST00000243253 DMAC2Q9NW81 257 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 ARMCX3Q9UH62 379 aaPredicted RBP13□□□□□ -0.33
SEC61A1-201ENST00000243253 GCOM1H8Y6P7 765 aaPredicted RBP13□□□□□ -0.33
SEC61A1-201ENST00000243253 MYZAPP0CAP1 466 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 VCAM1P19320 739 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 HOXA10P31260 410 aaPredicted RBP13□□□□□ -0.33
SEC61A1-201ENST00000243253 PTGIRP43119 386 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 GALCP54803 685 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 HLTFQ14527 1009 aaKnown RBP eCLIP13□□□□□ -0.33
SEC61A1-201ENST00000243253 ZKSCAN4Q969J2 545 aaPredicted RBP13□□□□□ -0.33
SEC61A1-201ENST00000243253 CABS1Q96KC9 395 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 PCDHA1Q9Y5I3 950 aa13□□□□□ -0.33
SEC61A1-201ENST00000243253 IGLV3-22A0A075B6J6 115 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 CEP104O60308 925 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 BUB1BO60566 1050 aaPredicted RBP12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 NR3C1P04150 777 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 MIGA2Q7L4E1 593 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 GRHL1Q9NZI5 618 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 RPTORQ8N122 1335 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 TCP10L2B9ZVM9 353 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 E7EVH7 732 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 EVI5O60447 810 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 GFPT2O94808 682 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 SHBGP04278 402 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 CTNNA1P35221 906 aaKnown RBP12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 TMEM174Q8WUU8 243 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 NAP1L4Q99733 375 aaKnown RBP12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 EML1O00423 815 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 TOM1O60784 492 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 SLFN12Q8IYM2 578 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 OTUD6BQ8N6M0 293 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 SLC35G2Q8TBE7 412 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 ALG3Q92685 438 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 RNF25Q96BH1 459 aaPredicted RBP12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 LRRC45Q96CN5 670 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 ARHGEF26Q96DR7 871 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 SEC16BQ96JE7 1060 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 HSD17B14Q9BPX1 270 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 SERPINB13Q9UIV8 391 aa12.99□□□□□ -0.33
SEC61A1-201ENST00000243253 WDR81Q562E7 1941 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 SMIM23A6NLE4 172 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 XRCC5P13010 732 aaKnown RBP12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 SREBF1P36956 1147 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 CBWD6Q4V339 395 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 CBWD3Q5JTY5 395 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 CBWD5Q5RIA9 395 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 APOBEC3HQ6NTF7 200 aaKnown RBP12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 CYP2W1Q8TAV3 490 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 TBC1D22AQ8WUA7 517 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 SPAG5Q96R06 1193 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 MTFR1LQ9H019 292 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 TAS2R14Q9NYV8 317 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms