RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 SYT2Q8N9I0 419 aaPredicted RBP16.82■□□□□ 0.28
DDX55-201ENST00000238146 SNX24Q9Y343 169 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 RTCBQ9Y3I0 505 aaKnown RBP16.82■□□□□ 0.28
DDX55-201ENST00000238146 PCDHB13Q9Y5F0 798 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 ARFGEF1Q9Y6D6 1849 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 GTPBP10A4D1E9 387 aaKnown RBP16.82■□□□□ 0.28
DDX55-201ENST00000238146 SLC16A3O15427 465 aaKnown RBP16.82■□□□□ 0.28
DDX55-201ENST00000238146 ATP6V1G2O95670 118 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 PSEN1P49768 467 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 IFI35P80217 286 aaPredicted RBP16.82■□□□□ 0.28
DDX55-201ENST00000238146 SPIRE1Q08AE8 756 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 KCNA1Q09470 495 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 ZNF211Q13398 564 aaPredicted RBP16.82■□□□□ 0.28
DDX55-201ENST00000238146 PPP1R7Q15435 360 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 PPP2R5EQ16537 467 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 DENND2CQ68D51 928 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 LRRC34Q8IZ02 419 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 ANKS4BQ8N8V4 417 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 FBXO25Q8TCJ0 367 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 CD209Q9NNX6 404 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 FAM187AA6NFU0 413 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 CCDC169A6NNP5 214 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 RSPH10B2B2RC85 870 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 KIAA0391O15091 583 aaKnown RBP16.81■□□□□ 0.28
DDX55-201ENST00000238146 RSPH10BP0C881 870 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 RPL13P26373 211 aaKnown RBP16.81■□□□□ 0.28
DDX55-201ENST00000238146 SOX5P35711 763 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 GABPAQ06546 454 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 SLC29A2Q14542 456 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 KIAA1755Q5JYT7 1200 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 JAMLQ86YT9 394 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 FAM163AQ96GL9 167 aaPredicted RBP16.81■□□□□ 0.28
DDX55-201ENST00000238146 MTFR1LQ9H019 292 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 SLC12A4Q9UP95 1085 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 DNM3Q9UQ16 869 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 CYP3A7-CYP3A51PA0A087WV96 503 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 GOLGA6L10A0A0M3HER8 536 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 TTLL1O95922 423 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 SPATA31C1P0DKV0 1188 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 LMNB1P20700 586 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 CYP3A7P24462 503 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 ITIH4Q14624 930 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 BMT2Q1RMZ1 405 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 KCTD1Q719H9 257 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 CTNNBL1Q8WYA6 563 aaPredicted RBP16.81■□□□□ 0.28
DDX55-201ENST00000238146 ARHGEF26Q96DR7 871 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 BORCS6Q96GS4 357 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 NAP1L3Q99457 506 aaPredicted RBP16.81■□□□□ 0.28
DDX55-201ENST00000238146 SYT11Q9BT88 431 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 AZI2Q9H6S1 392 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 NOD2Q9HC29 1040 aa16.81■□□□□ 0.28
DDX55-201ENST00000238146 FAM170AA1A519 330 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 SMIM23A6NLE4 172 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 DRG2P55039 364 aaKnown RBP16.8■□□□□ 0.28
DDX55-201ENST00000238146 MAPK7Q13164 816 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 GRAPQ13588 217 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 DHX34Q14147 1143 aaKnown RBP16.8■□□□□ 0.28
DDX55-201ENST00000238146 UBAP2Q5T6F2 1119 aaKnown RBP16.8■□□□□ 0.28
DDX55-201ENST00000238146 TLDC1Q6P9B6 456 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 TEX2Q8IWB9 1127 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 SLFN12Q8IYM2 578 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 GRAPLQ8TC17 118 aaPredicted RBP16.8■□□□□ 0.28
DDX55-201ENST00000238146 ALG3Q92685 438 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 MIEF2Q96C03 454 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 MBOAT7Q96N66 472 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 ANO3Q9BYT9 981 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 ATP6V0A4Q9HBG4 840 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 RGS16O15492 202 aaPredicted RBP16.8■□□□□ 0.28
DDX55-201ENST00000238146 GSTA1P08263 222 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 SCP2P22307 547 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 C15orf52Q6ZUT6 534 aaKnown RBP16.8■□□□□ 0.28
DDX55-201ENST00000238146 SEMA4AQ9H3S1 761 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 INTS9Q9NV88 658 aaKnown RBP16.8■□□□□ 0.28
DDX55-201ENST00000238146 BAIAP2L1Q9UHR4 511 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 THRAP3Q9Y2W1 955 aaKnown RBP16.8■□□□□ 0.28
DDX55-201ENST00000238146 RPTORQ8N122 1335 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 CNTNAP4Q9C0A0 1308 aa16.8■□□□□ 0.28
DDX55-201ENST00000238146 RPA1P27694 616 aa16.79■□□□□ 0.28
DDX55-201ENST00000238146 DRAP1Q14919 205 aaPredicted RBP16.79■□□□□ 0.28
DDX55-201ENST00000238146 ETNPPLQ8TBG4 499 aa16.79■□□□□ 0.28
DDX55-201ENST00000238146 PRMT1Q99873 361 aaKnown RBP16.79■□□□□ 0.28
DDX55-201ENST00000238146 ELAC2Q9BQ52 826 aaKnown RBP16.79■□□□□ 0.28
DDX55-201ENST00000238146 STK33Q9BYT3 514 aa16.79■□□□□ 0.28
DDX55-201ENST00000238146 GRHL1Q9NZI5 618 aa16.79■□□□□ 0.28
DDX55-201ENST00000238146 TRPC6Q9Y210 931 aa16.79■□□□□ 0.28
DDX55-201ENST00000238146 GAKO14976 1311 aa16.79■□□□□ 0.28
DDX55-201ENST00000238146 COL16A1Q07092 1604 aaPredicted RBP16.79■□□□□ 0.28
DDX55-201ENST00000238146 TGFB1I1O43294 461 aa16.79■□□□□ 0.28
DDX55-201ENST00000238146 GCNT3O95395 438 aa16.79■□□□□ 0.28
DDX55-201ENST00000238146 CHRM1P11229 460 aaPredicted RBP16.79■□□□□ 0.28
DDX55-201ENST00000238146 VCAM1P19320 739 aa16.79■□□□□ 0.28
DDX55-201ENST00000238146 PICALMQ13492 652 aa16.79■□□□□ 0.28
DDX55-201ENST00000238146 MFSD14BQ5SR56 506 aa16.79■□□□□ 0.28
DDX55-201ENST00000238146 GPATCH4Q5T3I0 446 aaKnown RBP16.79■□□□□ 0.28
DDX55-201ENST00000238146 AADACL2Q6P093 401 aa16.79■□□□□ 0.28
DDX55-201ENST00000238146 CCDC63Q8NA47 563 aa16.79■□□□□ 0.28
DDX55-201ENST00000238146 IKZF4Q9H2S9 585 aa16.79■□□□□ 0.28
DDX55-201ENST00000238146 TMOD4Q9NZQ9 345 aa16.79■□□□□ 0.28
DDX55-201ENST00000238146 DNAJC12Q9UKB3 198 aa16.79■□□□□ 0.28
DDX55-201ENST00000238146 COG5Q9UP83 839 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms