RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 CKBP12277 381 aa22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 SELPP16109 830 aa22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 RGS19P49795 217 aa22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 MRPS6P82932 125 aaKnown RBP22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 TFDP1Q14186 410 aa22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 LRRC15Q8TF66 581 aa22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 DHX38Q92620 1227 aaKnown RBP22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 IFT74Q96LB3 600 aa22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 PPP1R12CQ9BZL4 782 aa22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 POLR3FQ9H1D9 316 aaPredicted RBP22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 KCNG1Q9UIX4 513 aa22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 HOOK1Q9UJC3 728 aaKnown RBP22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 ODF2LQ9ULJ1 636 aa22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 COL4A3BPQ9Y5P4 624 aa22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 KINO60870 393 aaKnown RBP22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 PPP2R5AQ15172 486 aa22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 TRIM71Q2Q1W2 868 aaKnown RBP22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 LRRC8DQ7L1W4 858 aa22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 RHPN2Q8IUC4 686 aa22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 KBTBD4Q9NVX7 518 aa22.38■■□□□ 1.17
RHBDD3-201ENST00000216085 ALPK3Q96L96 1907 aa22.37■■□□□ 1.17
RHBDD3-201ENST00000216085 RSPH10B2B2RC85 870 aa22.37■■□□□ 1.17
RHBDD3-201ENST00000216085 VTNP04004 478 aa22.37■■□□□ 1.17
RHBDD3-201ENST00000216085 CTSHP09668 335 aa22.37■■□□□ 1.17
RHBDD3-201ENST00000216085 RSPH10BP0C881 870 aa22.37■■□□□ 1.17
RHBDD3-201ENST00000216085 ZNF410Q86VK4 478 aa22.37■■□□□ 1.17
RHBDD3-201ENST00000216085 WNT8BQ93098 351 aa22.37■■□□□ 1.17
RHBDD3-201ENST00000216085 C17orf75Q9HAS0 396 aa22.37■■□□□ 1.17
RHBDD3-201ENST00000216085 SERTAD1Q9UHV2 236 aa22.37■■□□□ 1.17
RHBDD3-201ENST00000216085 TRPV2Q9Y5S1 764 aa22.37■■□□□ 1.17
RHBDD3-201ENST00000216085 EVPLQ92817 2033 aa22.36■■□□□ 1.17
RHBDD3-201ENST00000216085 ACTN4O43707 911 aaKnown RBP22.36■■□□□ 1.17
RHBDD3-201ENST00000216085 TIMP1P01033 207 aa22.36■■□□□ 1.17
RHBDD3-201ENST00000216085 MYL1P05976 194 aa22.36■■□□□ 1.17
RHBDD3-201ENST00000216085 FMR1NBQ8N0W7 255 aaPredicted RBP22.36■■□□□ 1.17
RHBDD3-201ENST00000216085 PRPF31Q8WWY3 499 aaKnown RBP22.36■■□□□ 1.17
RHBDD3-201ENST00000216085 NLRP7Q8WX94 980 aa22.36■■□□□ 1.17
RHBDD3-201ENST00000216085 GINS2Q9Y248 185 aa22.36■■□□□ 1.17
RHBDD3-201ENST00000216085 HIP1RO75146 1068 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 FAM13AO94988 1023 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 ARL2P36404 184 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 RAD51AP2Q09MP3 1159 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 TMEM62Q0P6H9 643 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 MKRN4PQ13434 485 aaPredicted RBP22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 DRP2Q13474 957 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 LONRF3Q496Y0 759 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 ZNF618Q5T7W0 954 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 KRBA2Q6ZNG9 492 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 DDX12PQ92771 950 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 GPRC5CQ9NQ84 441 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 LARSQ9P2J5 1176 aaKnown RBP22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 CDY2AQ9Y6F7 541 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 PTMSP20962 102 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 GPC3P51654 580 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 NLRP11P59045 1033 aaKnown RBP22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 LAMTOR4Q0VGL1 99 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 DMP1Q13316 513 aaPredicted RBP22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 SH3RF1Q7Z6J0 888 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 TMEM199Q8N511 208 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 NLRP4Q96MN2 994 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 TIGD1Q96MW7 591 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 REEP2Q9BRK0 252 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 CELF4Q9BZC1 486 aaKnown RBP22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 LMBRD1Q9NUN5 540 aa22.35■■□□□ 1.17
RHBDD3-201ENST00000216085 TRIM43BA6NCK2 446 aa22.34■■□□□ 1.17
RHBDD3-201ENST00000216085 RFC2P35250 354 aa22.34■■□□□ 1.17
RHBDD3-201ENST00000216085 AFMP43652 599 aa22.34■■□□□ 1.17
RHBDD3-201ENST00000216085 KIZQ2M2Z5 673 aa22.34■■□□□ 1.17
RHBDD3-201ENST00000216085 ARSHQ5FYA8 562 aa22.34■■□□□ 1.17
RHBDD3-201ENST00000216085 FAM26DQ5JW98 314 aa22.34■■□□□ 1.17
RHBDD3-201ENST00000216085 DYMQ7RTS9 669 aa22.34■■□□□ 1.17
RHBDD3-201ENST00000216085 ENGASEQ8NFI3 743 aa22.34■■□□□ 1.17
RHBDD3-201ENST00000216085 TRIM43Q96BQ3 446 aaPredicted RBP22.34■■□□□ 1.17
RHBDD3-201ENST00000216085 LBHD1Q9BQE6 289 aaPredicted RBP22.34■■□□□ 1.17
RHBDD3-201ENST00000216085 INO80BQ9C086 356 aaPredicted RBP22.34■■□□□ 1.17
RHBDD3-201ENST00000216085 ZHX3Q9H4I2 956 aa22.34■■□□□ 1.17
RHBDD3-201ENST00000216085 PARVGQ9HBI0 331 aa22.34■■□□□ 1.17
RHBDD3-201ENST00000216085 MYMKA6NI61 221 aa22.33■■□□□ 1.17
RHBDD3-201ENST00000216085 NR1I2O75469 434 aa22.33■■□□□ 1.17
RHBDD3-201ENST00000216085 CYP2C18P33260 490 aa22.33■■□□□ 1.17
RHBDD3-201ENST00000216085 PHKA2P46019 1235 aa22.33■■□□□ 1.17
RHBDD3-201ENST00000216085 CRYBB1P53674 252 aaPredicted RBP22.33■■□□□ 1.17
RHBDD3-201ENST00000216085 SNW1Q13573 536 aaKnown RBP22.33■■□□□ 1.17
RHBDD3-201ENST00000216085 USP38Q8NB14 1042 aa22.33■■□□□ 1.17
RHBDD3-201ENST00000216085 RNF149Q8NC42 400 aa22.33■■□□□ 1.17
RHBDD3-201ENST00000216085 STAMQ92783 540 aa22.33■■□□□ 1.17
RHBDD3-201ENST00000216085 PPP1R16BQ96T49 567 aa22.33■■□□□ 1.17
RHBDD3-201ENST00000216085 GCOM2Q9BZD3 368 aaPredicted RBP22.33■■□□□ 1.17
RHBDD3-201ENST00000216085 TRIM9Q9C026 710 aa22.33■■□□□ 1.17
RHBDD3-201ENST00000216085 LRRIQ4A6NIV6 560 aa22.33■■□□□ 1.16
RHBDD3-201ENST00000216085 IQCF3P0C7M6 154 aa22.33■■□□□ 1.16
RHBDD3-201ENST00000216085 SRGAP2CP0DJJ0 459 aa22.33■■□□□ 1.16
RHBDD3-201ENST00000216085 LIG1P18858 919 aa22.33■■□□□ 1.16
RHBDD3-201ENST00000216085 GLRA2P23416 452 aa22.33■■□□□ 1.16
RHBDD3-201ENST00000216085 NAMPTP43490 491 aa22.33■■□□□ 1.16
RHBDD3-201ENST00000216085 SMTNP53814 917 aa22.33■■□□□ 1.16
RHBDD3-201ENST00000216085 CCL23P55773 120 aa22.33■■□□□ 1.16
RHBDD3-201ENST00000216085 ASIC1P78348 528 aa22.33■■□□□ 1.16
RHBDD3-201ENST00000216085 GIT2Q14161 759 aa22.33■■□□□ 1.16
RHBDD3-201ENST00000216085 ODR4Q5SWX8 454 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms