RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 ADAT2Q7Z6V5 191 aaKnown RBP11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 ZNF668Q96K58 619 aaPredicted RBP11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 ACAP3Q96P50 834 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 KIF28PB7ZC32 967 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 ASAP2O43150 1006 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 ICAM1P05362 532 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 TOGARAM2Q6ZUX3 1019 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 RIT2Q99578 217 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 MXRA8Q9BRK3 442 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 CALN1Q9BXU9 219 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 MROH8Q9H579 483 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 PIDD1Q9HB75 910 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 ETF1P62495 437 aaKnown RBP11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 BZW1Q7L1Q6 419 aaKnown RBP11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 PLEKHH3Q7Z736 793 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 C17orf53Q8N3J3 647 aaPredicted RBP11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 GUF1Q8N442 669 aaKnown RBP11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 AGBL1Q96MI9 1066 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 TTC1Q99614 292 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 RRAGCQ9HB90 399 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 RBAKQ9NYW8 714 aaPredicted RBP11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 KCND2Q9NZV8 630 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 KIF20BQ96Q89 1820 aa11.15□□□□□ -0.63
NIPAL3-201ENST00000003912 EIF4A3P38919 411 aaKnown RBP11.15□□□□□ -0.63
NIPAL3-201ENST00000003912 GARSP41250 739 aaKnown RBP11.15□□□□□ -0.63
NIPAL3-201ENST00000003912 KIF12Q96FN5 646 aa11.15□□□□□ -0.63
NIPAL3-201ENST00000003912 ERAP1Q9NZ08 941 aa11.15□□□□□ -0.63
NIPAL3-201ENST00000003912 MAD1L1Q9Y6D9 718 aa11.15□□□□□ -0.63
NIPAL3-201ENST00000003912 HEXIM1O94992 359 aaKnown RBP11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 NBPF9Q3BBW0 867 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 KRT71Q3SY84 523 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 KRT39Q6A163 491 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 RTFDC1Q9BY42 306 aaPredicted RBP11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 ARHGEF28Q8N1W1 1705 aaKnown RBP11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 SALL1Q9NSC2 1324 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 RRN3P2A6NIE6 340 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 EBAG9O00559 213 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 ZNF18P17022 549 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 HSPA6P17066 643 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 NFIAQ12857 509 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 DUOXA2Q1HG44 320 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 GNASQ5JWF2 1037 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 VSTM4Q8IW00 320 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 MAGOHBQ96A72 148 aaKnown RBP11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 GLT1D1Q96MS3 346 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 NHEJ1Q9H9Q4 299 aaPredicted RBP11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 RGL1Q9NZL6 768 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 STRIP2Q9ULQ0 834 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 PP2D1A8MPX8 630 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 ZNF394Q53GI3 561 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 RHOT2Q8IXI1 618 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 GPRASP2Q96D09 838 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 MOV10L1Q9BXT6 1211 aaKnown RBP11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 VEPH1Q14D04 833 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 SAMD3Q8N6K7 520 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 AFAP1L1Q8TED9 768 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 HOMER3Q9NSC5 361 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 CEP72Q9P209 647 aa11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.14□□□□□ -0.63
NIPAL3-201ENST00000003912 HBP1O60381 514 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 TMEM270Q6UE05 265 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 ARHGEF18Q6ZSZ5 1173 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 ENOSF1Q7L5Y1 443 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 NDUFAF2Q8N183 169 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 KCTD17Q8N5Z5 321 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 CCSER1Q9C0I3 900 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 DPH5Q9H2P9 285 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 LMCD1Q9NZU5 365 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 ESYT2A0FGR8 921 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 LRRD1A4D1F6 860 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 CALB1P05937 261 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 ACTN1P12814 892 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 CPB1P15086 417 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 PSMA2P25787 234 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 PRCPP42785 496 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 SGO2Q562F6 1265 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 RDM1Q8NG50 284 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 POLD4Q9HCU8 107 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 ADAM22Q9P0K1 906 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 RSPH14Q9UHP6 348 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 HOXA10P31260 410 aaPredicted RBP11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 KCNH2Q12809 1159 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 RNF219Q5W0B1 726 aaPredicted RBP11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 DPF2Q92785 391 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 FAM205AQ6ZU69 1335 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 RGS16O15492 202 aaPredicted RBP11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 TFRCP02786 760 aaKnown RBP11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 CTSHP09668 335 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 CTNNA1P35221 906 aaKnown RBP11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 RPS6P62753 249 aaKnown RBP11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 DDR1Q08345 913 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 NBPF12Q5TAG4 269 aaPredicted RBP11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 NAA35Q5VZE5 725 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 ALKBH5Q6P6C2 394 aaKnown RBP11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 DARS2Q6PI48 645 aaKnown RBP11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 USP50Q70EL3 339 aaPredicted RBP11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 CCHCR1Q8TD31 782 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 SAAL1Q96ER3 474 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms