RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 TBC1D8BQ0IIM8 1120 aa13.69□□□□□ -0.22
LINC00339-213ENST00000642137 KLHL40Q2TBA0 621 aa13.69□□□□□ -0.22
LINC00339-213ENST00000642137 MARCH8Q5T0T0 291 aa13.69□□□□□ -0.22
LINC00339-213ENST00000642137 MTHFD1LQ6UB35 978 aa13.69□□□□□ -0.22
LINC00339-213ENST00000642137 GPBP1Q86WP2 473 aa13.69□□□□□ -0.22
LINC00339-213ENST00000642137 STAMQ92783 540 aa13.69□□□□□ -0.22
LINC00339-213ENST00000642137 SENP6Q9GZR1 1112 aaPredicted RBP13.69□□□□□ -0.22
LINC00339-213ENST00000642137 ARID2Q68CP9 1835 aa13.69□□□□□ -0.22
LINC00339-213ENST00000642137 EVPLQ92817 2033 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 GTPBP6O43824 516 aaPredicted RBP13.68□□□□□ -0.22
LINC00339-213ENST00000642137 C22orf31O95567 290 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 POLGP54098 1239 aaPredicted RBP13.68□□□□□ -0.22
LINC00339-213ENST00000642137 IGBP1P78318 339 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 GIT2Q14161 759 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 C1orf53Q5VUE5 145 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 IER5Q5VY09 327 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 SLC39A5Q6ZMH5 540 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 RETREG2Q8NC44 543 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 MCPH1Q8NEM0 835 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 LMBR1Q8WVP7 490 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 TRAPPC12Q8WVT3 735 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 TCP11Q8WWU5 503 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 SLC7A3Q8WY07 619 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 DDX12PQ92771 950 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 RUSC1Q9BVN2 902 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 TRIM9Q9C026 710 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 CLSTN2Q9H4D0 955 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 C11orf49Q9H6J7 331 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 ATP6V0A4Q9HBG4 840 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 PCDHA2Q9Y5H9 948 aa13.68□□□□□ -0.22
LINC00339-213ENST00000642137 TRIP12Q14669 1992 aaPredicted RBP13.68□□□□□ -0.22
LINC00339-213ENST00000642137 SMIM35A0A1B0GVV1 85 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 PVALEFA0A1B0GWK0 134 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 TRAK2O60296 914 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 USO1O60763 962 aaKnown RBP13.67□□□□□ -0.22
LINC00339-213ENST00000642137 KRT18P05783 430 aaKnown RBP13.67□□□□□ -0.22
LINC00339-213ENST00000642137 EN2P19622 333 aaPredicted RBP13.67□□□□□ -0.22
LINC00339-213ENST00000642137 TMOD1P28289 359 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 DNM2P50570 870 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 DPYDQ12882 1025 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 HIC1Q14526 733 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 POSTNQ15063 836 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 FAM47CQ5HY64 1035 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 GDF6Q6KF10 455 aaPredicted RBP13.67□□□□□ -0.22
LINC00339-213ENST00000642137 EFCAB12Q6NXP0 572 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 NECAB2Q7Z6G3 386 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 LINC01465Q8N7H1 131 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 DNAJC19Q96DA6 116 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 ABHD8Q96I13 439 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 PAWRQ96IZ0 340 aaKnown RBP13.67□□□□□ -0.22
LINC00339-213ENST00000642137 XPNPEP1Q9NQW7 623 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 KCNG1Q9UIX4 513 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 TUBE1Q9UJT0 475 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 ODF2LQ9ULJ1 636 aa13.67□□□□□ -0.22
LINC00339-213ENST00000642137 ASAP2O43150 1006 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 TREHO43280 583 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 RPLP2P05387 115 aaKnown RBP13.66□□□□□ -0.22
LINC00339-213ENST00000642137 CYP2C9P11712 490 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 ARL2P36404 184 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 RTP1P59025 263 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 ZNF200P98182 395 aaPredicted RBP13.66□□□□□ -0.22
LINC00339-213ENST00000642137 CDC42EP1Q00587 391 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 CUL4BQ13620 913 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 EMC2Q15006 297 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 SNX17Q15036 470 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 DYMQ7RTS9 669 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 GRAMD1CQ8IYS0 662 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 NME8Q8N427 588 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 DIS3LQ8TF46 1054 aaKnown RBP13.66□□□□□ -0.22
LINC00339-213ENST00000642137 PPP1R13LQ8WUF5 828 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 KIFAP3Q92845 792 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 SYAP1Q96A49 352 aaPredicted RBP13.66□□□□□ -0.22
LINC00339-213ENST00000642137 NUP62CLQ9H1M0 184 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 SUGCTQ9HAC7 445 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 C17orf75Q9HAS0 396 aa13.66□□□□□ -0.22
LINC00339-213ENST00000642137 KIAA0100Q14667 2235 aaKnown RBP13.66□□□□□ -0.22
LINC00339-213ENST00000642137 MROH7Q68CQ1 1323 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 NPHP3-ACAD11A0A0J9YXS1 232 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 FRMD3A2A2Y4 597 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 HIP1RO75146 1068 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 SMC2O95347 1197 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 PRR29P0C7W0 189 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 SARSP49591 514 aaKnown RBP13.65□□□□□ -0.22
LINC00339-213ENST00000642137 ZNF131P52739 623 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 PTK7Q13308 1070 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 MKRN4PQ13434 485 aaPredicted RBP13.65□□□□□ -0.22
LINC00339-213ENST00000642137 PNOCQ13519 176 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 CAMK4Q16566 473 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 PTGISQ16647 500 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 FAM102BQ5T8I3 360 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 TAF2Q6P1X5 1199 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 UNC13DQ70J99 1090 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 MAEAQ7L5Y9 396 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 UBE2Q1Q7Z7E8 422 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 CCDC65Q8IXS2 484 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 KIAA0319LQ8IZA0 1049 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 ZNF710Q8N1W2 664 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 METTL13Q8N6R0 699 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 SPATA20Q8TB22 786 aa13.65□□□□□ -0.22
LINC00339-213ENST00000642137 DRC1Q96MC2 740 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms