RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 KIAA0825Q8IV33 1275 aa18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 ERMNQ8TAM6 284 aa18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 PLCB1Q9NQ66 1216 aa18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 SWAP70Q9UH65 585 aa18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 PITPNM2Q9BZ72 1349 aa18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 IGSF9BQ9UPX0 1349 aa18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 DDTLA6NHG4 134 aaPredicted RBP18.02■□□□□ 0.47
HNRNPU-228ENST00000640306 HMGB1P1B2RPK0 211 aaPredicted RBP18.02■□□□□ 0.47
HNRNPU-228ENST00000640306 MEFVO15553 781 aaPredicted RBP18.02■□□□□ 0.47
HNRNPU-228ENST00000640306 BUB1BO60566 1050 aaPredicted RBP18.02■□□□□ 0.47
HNRNPU-228ENST00000640306 BBOX1O75936 387 aa18.02■□□□□ 0.47
HNRNPU-228ENST00000640306 RPA1P27694 616 aa18.02■□□□□ 0.47
HNRNPU-228ENST00000640306 KCNV1Q6PIU1 500 aa18.02■□□□□ 0.47
HNRNPU-228ENST00000640306 MMS22LQ6ZRQ5 1243 aa18.02■□□□□ 0.47
HNRNPU-228ENST00000640306 TPH2Q8IWU9 490 aa18.02■□□□□ 0.47
HNRNPU-228ENST00000640306 ZC3H3Q8IXZ2 948 aaKnown RBP18.02■□□□□ 0.47
HNRNPU-228ENST00000640306 MYCT1Q8N699 235 aa18.02■□□□□ 0.47
HNRNPU-228ENST00000640306 LNX1Q8TBB1 728 aaPredicted RBP18.02■□□□□ 0.47
HNRNPU-228ENST00000640306 LENG9Q96B70 501 aa18.02■□□□□ 0.47
HNRNPU-228ENST00000640306 MSH4O15457 936 aa18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 ATP2C2O75185 946 aa18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 MNAT1P51948 309 aa18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 DHX9Q08211 1270 aaKnown RBP18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 IFI16Q16666 785 aaKnown RBP18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 APOBEC3HQ6NTF7 200 aaKnown RBP18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 VPS36Q86VN1 386 aa18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 CD302Q8IX05 232 aa18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 ACTRT1Q8TDG2 376 aa18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 PPP1R9AQ9ULJ8 1098 aa18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 LRRN2O75325 713 aa18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 CERKLQ49MI3 558 aaPredicted RBP18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 AADACL2Q6P093 401 aa18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 DBNDD1Q9H9R9 158 aa18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 GOPCQ9HD26 462 aa18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 TYW1Q9NV66 732 aaKnown RBP18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 CNOT8Q9UFF9 292 aaKnown RBP18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 ATP8A1Q9Y2Q0 1164 aa18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 RABGAP1Q9Y3P9 1069 aa18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 ARFGEF1Q9Y6D6 1849 aa18.01■□□□□ 0.47
HNRNPU-228ENST00000640306 SMIM23A6NLE4 172 aa18■□□□□ 0.47
HNRNPU-228ENST00000640306 H0YGN5 161 aa18■□□□□ 0.47
HNRNPU-228ENST00000640306 PDXKO00764 312 aa18■□□□□ 0.47
HNRNPU-228ENST00000640306 CHADLQ6NUI6 762 aa18■□□□□ 0.47
HNRNPU-228ENST00000640306 EPM2AIP1Q7L775 607 aaPredicted RBP18■□□□□ 0.47
HNRNPU-228ENST00000640306 NT5DC3Q86UY8 548 aa18■□□□□ 0.47
HNRNPU-228ENST00000640306 PALB2Q86YC2 1186 aa18■□□□□ 0.47
HNRNPU-228ENST00000640306 EIF2AK1Q9BQI3 630 aaKnown RBP18■□□□□ 0.47
HNRNPU-228ENST00000640306 TAS2R14Q9NYV8 317 aa18■□□□□ 0.47
HNRNPU-228ENST00000640306 NFS1Q9Y697 457 aa18■□□□□ 0.47
HNRNPU-228ENST00000640306 BZW2Q9Y6E2 419 aaKnown RBP18■□□□□ 0.47
HNRNPU-228ENST00000640306 POLRMTO00411 1230 aaKnown RBP18■□□□□ 0.47
HNRNPU-228ENST00000640306 PPEF1O14829 653 aaPredicted RBP18■□□□□ 0.47
HNRNPU-228ENST00000640306 TGFB1I1O43294 461 aa18■□□□□ 0.47
HNRNPU-228ENST00000640306 KRT71Q3SY84 523 aa18■□□□□ 0.47
HNRNPU-228ENST00000640306 MAEAQ7L5Y9 396 aa18■□□□□ 0.47
HNRNPU-228ENST00000640306 TRMT1LQ7Z2T5 733 aaKnown RBP18■□□□□ 0.47
HNRNPU-228ENST00000640306 FAM186BQ8IYM0 893 aa18■□□□□ 0.47
HNRNPU-228ENST00000640306 SLC35G2Q8TBE7 412 aa18■□□□□ 0.47
HNRNPU-228ENST00000640306 MAGOHP61326 146 aaKnown RBP17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 CUL1Q13616 776 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 QPCTQ16769 361 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 UHMK1Q8TAS1 419 aaKnown RBP17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 GLG1Q92896 1179 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 MAGOHBQ96A72 148 aaKnown RBP17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 LRRC45Q96CN5 670 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 F5H6K3 240 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 PLSCR1O15162 318 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 FAM13AO94988 1023 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 ZBTB48P10074 688 aaPredicted RBP17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 IBSPP21815 317 aaPredicted RBP17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 RPL13P26373 211 aaKnown RBP17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 STAT1P42224 750 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 ICA1Q05084 483 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 KLRC3Q07444 240 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 DRAP1Q14919 205 aaPredicted RBP17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 LLGL1Q15334 1064 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 C10orf76Q5T2E6 689 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 MDM1Q8TC05 714 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 TEKT1Q969V4 418 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 ARHGEF26Q96DR7 871 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 TMOD4Q9NZQ9 345 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 CYP3A7-CYP3A51PA0A087WV96 503 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 CYP3A7P24462 503 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 JAM2P57087 298 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 MKRN4PQ13434 485 aaPredicted RBP17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 CBWD6Q4V339 395 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 CBWD3Q5JTY5 395 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 CBWD5Q5RIA9 395 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 FBXO11Q86XK2 927 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 AKT1S1Q96B36 256 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 NAP1L4Q99733 375 aaKnown RBP17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 AMNQ9BXJ7 453 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 DNAJC12Q9UKB3 198 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 AMFRQ9UKV5 643 aa17.99■□□□□ 0.47
HNRNPU-228ENST00000640306 MYO3BQ8WXR4 1341 aa17.98■□□□□ 0.47
HNRNPU-228ENST00000640306 TMEM110-MUSTN1A8MSY1 372 aa17.98■□□□□ 0.47
HNRNPU-228ENST00000640306 PRKCIP41743 596 aa17.98■□□□□ 0.47
HNRNPU-228ENST00000640306 IFFO1Q0D2I5 559 aa17.98■□□□□ 0.47
HNRNPU-228ENST00000640306 RINT1Q6NUQ1 792 aa17.98■□□□□ 0.47
HNRNPU-228ENST00000640306 SIAH1Q8IUQ4 282 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms