RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-225	ENST00000636861	TIMMDC1	Q9NPL8	285 aa		4.37	□□□□□ -1.71
CHD2-225	ENST00000636861	PPAN	Q9NQ55	473 aa	Known RBP	4.37	□□□□□ -1.71
CHD2-225	ENST00000636861	HELLS	Q9NRZ9	838 aa		4.37	□□□□□ -1.71
CHD2-225	ENST00000636861	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
CHD2-225	ENST00000636861	TMOD3	Q9NYL9	352 aa		4.37	□□□□□ -1.71
CHD2-225	ENST00000636861	TUBGCP4	Q9UGJ1	667 aa		4.37	□□□□□ -1.71
CHD2-225	ENST00000636861	CROT	Q9UKG9	612 aa		4.37	□□□□□ -1.71
CHD2-225	ENST00000636861	SATB2	Q9UPW6	733 aa		4.37	□□□□□ -1.71
CHD2-225	ENST00000636861	HYOU1	Q9Y4L1	999 aa		4.37	□□□□□ -1.71
CHD2-225	ENST00000636861	LRRC42	Q9Y546	428 aa		4.37	□□□□□ -1.71
CHD2-225	ENST00000636861	ZMYM6	O95789	1325 aa		4.37	□□□□□ -1.71
CHD2-225	ENST00000636861	MROH7	Q68CQ1	1323 aa		4.37	□□□□□ -1.71
CHD2-225	ENST00000636861		A0A1B0GVL5	298 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	SMIM31	A0A1B0GVY4	71 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	POTEB3	A0JP26	581 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	GRID2IP	A4D2P6	1211 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	DPPA5	A6NC42	116 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	SOWAHD	A6NJG2	315 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	YDJC	A8MPS7	323 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	LSM1	O15116	133 aa	Known RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	TTI1	O43156	1089 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	ACTN4	O43707	911 aa	Known RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	CBFA2T3	O75081	653 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	RAD17	O75943	681 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	TPPP	O94811	219 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	SUN1	O94901	812 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	TFRC	P02786	760 aa	Known RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	IDE	P14735	1019 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	ALOX15	P16050	662 aa	Predicted RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	NAT1	P18440	290 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	POLR2E	P19388	210 aa	Known RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	KCNA4	P22459	653 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	CALB2	P22676	271 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	DNAJB2	P25686	324 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	ATP5D	P30049	168 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	STIP1	P31948	543 aa	Known RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	FLT3	P36888	993 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	VHL	P40337	213 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	RGS2	P41220	211 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	MSH2	P43246	934 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	PDE6C	P51160	858 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	PLCD1	P51178	756 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	OXCT1	P55809	520 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	GUCY1A3	Q02108	690 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	AIMP1	Q12904	312 aa	Known RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	ITGA9	Q13797	1035 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	CYLC2	Q14093	348 aa	Predicted RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	NONO	Q15233	471 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	NDUFA5	Q16718	116 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	AOC3	Q16853	763 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	LRRC26	Q2I0M4	334 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	PARP6	Q2NL67	630 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	PUS10	Q3MIT2	529 aa	Known RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	WASHC2D	Q5SRD0	308 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	RASIP1	Q5U651	963 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	TRIM68	Q6AZZ1	485 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	FAM117B	Q6P1L5	589 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	POTEB	Q6S5H4	581 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861		Q6ZUG5	572 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	TAOK1	Q7L7X3	1001 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	TRPM8	Q7Z2W7	1104 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	NIM1K	Q8IY84	436 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	KIRREL3	Q8IZU9	778 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	AGGF1	Q8N302	714 aa	eCLIP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	KRI1	Q8N9T8	703 aa	Known RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	RBBP8NL	Q8NC74	664 aa	Predicted RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	NSUN7	Q8NE18	718 aa	Known RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	KLHDC4	Q8TBB5	520 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	ATP8B4	Q8TF62	1192 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	WDR60	Q8WVS4	1066 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	DNAJC9	Q8WXX5	260 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	NCSTN	Q92542	709 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	IP6K1	Q92551	441 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	ATP6V0A1	Q93050	837 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	DCPS	Q96C86	337 aa	Known RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	GRAMD1A	Q96CP6	724 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	KLHL29	Q96CT2	875 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	CLMN	Q96JQ2	1002 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	CCDC43	Q96MW1	224 aa	Known RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	TUBGCP5	Q96RT8	1024 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	GAS2L1	Q99501	681 aa	Predicted RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	CGREF1	Q99674	301 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	YIPF2	Q9BWQ6	316 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	FAM129A	Q9BZQ8	928 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	NACA2	Q9H009	215 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	RNPEPL1	Q9HAU8	725 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	TMEM165	Q9HC07	324 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	TMBIM4	Q9HC24	238 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	GPCPD1	Q9NPB8	672 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	PAK6	Q9NQU5	681 aa	Predicted RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	SNRK	Q9NRH2	765 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	FAM114A2	Q9NRY5	505 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	MBIP	Q9NS73	344 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	ABHD10	Q9NUJ1	306 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	FANCL	Q9NW38	375 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	CABP1	Q9NZU7	370 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	SAP30BP	Q9UHR5	308 aa	Known RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	FZD1	Q9UP38	647 aa		4.36	□□□□□ -1.71

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