RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 USP17L13C9JLJ4 530 aa17.24■□□□□ 0.35
CLN5-208ENST00000636183 USP17L11C9JVI0 530 aa17.24■□□□□ 0.35
CLN5-208ENST00000636183 USP17L18D6R9N7 530 aa17.24■□□□□ 0.35
CLN5-208ENST00000636183 USP17L22D6RA61 530 aa17.24■□□□□ 0.35
CLN5-208ENST00000636183 USP17L17D6RBQ6 530 aa17.24■□□□□ 0.35
CLN5-208ENST00000636183 USP17L19D6RCP7 530 aa17.24■□□□□ 0.35
CLN5-208ENST00000636183 USP17L20D6RJB6 530 aa17.24■□□□□ 0.35
CLN5-208ENST00000636183 TTI1O43156 1089 aa17.24■□□□□ 0.35
CLN5-208ENST00000636183 TAC1P20366 129 aa17.24■□□□□ 0.35
CLN5-208ENST00000636183 USP17L24Q0WX57 530 aa17.24■□□□□ 0.35
CLN5-208ENST00000636183 GUCY2DQ02846 1103 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 ANKS3Q6ZW76 656 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 AK8Q96MA6 479 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 IKBKBO14920 756 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 MT-ND3P03897 115 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 IFNAR2P48551 515 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 HLFQ16534 295 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 RBBP7Q16576 425 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 BHMTQ93088 406 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 SH3BP1Q9Y3L3 701 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 RNF123Q5XPI4 1314 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 ZSCAN9O15535 394 aaPredicted RBP17.23■□□□□ 0.35
CLN5-208ENST00000636183 CAPZA2P47755 286 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 BTN2A2Q8WVV5 523 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 P2RX5Q93086 422 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 RUNDC3BQ96NL0 473 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 PUS7LQ9H0K6 701 aaKnown RBP17.23■□□□□ 0.35
CLN5-208ENST00000636183 AP1B1Q10567 949 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 GRAMD1CQ8IYS0 662 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 CERKQ8TCT0 537 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 MAN1C1Q9NR34 630 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 ZSCAN32Q9NX65 697 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 KRT17Q04695 432 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 SYTL3Q4VX76 610 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 TAGAPQ8N103 731 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 TRIM45Q9H8W5 580 aaPredicted RBP17.23■□□□□ 0.35
CLN5-208ENST00000636183 ECEL1O95672 775 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 PSMC5P62195 406 aa17.23■□□□□ 0.35
CLN5-208ENST00000636183 DDX50Q9BQ39 737 aaKnown RBP17.23■□□□□ 0.35
CLN5-208ENST00000636183 DNAJC17Q9NVM6 304 aaKnown RBP17.23■□□□□ 0.35
CLN5-208ENST00000636183 PAN2Q504Q3 1202 aaKnown RBP17.22■□□□□ 0.35
CLN5-208ENST00000636183 PHLDB3Q6NSJ2 640 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 SLC26A7Q8TE54 656 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 POLR3FQ9H1D9 316 aaPredicted RBP17.22■□□□□ 0.35
CLN5-208ENST00000636183 MAGEF1Q9HAY2 307 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 hCG_1984214I3L0E3 225 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 PIK3R2O00459 728 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 PRELPP51888 382 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 PTPN21Q16825 1174 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 SPATA1Q5VX52 437 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 ZNF713Q8N859 430 aaPredicted RBP17.22■□□□□ 0.35
CLN5-208ENST00000636183 RNF26Q9BY78 433 aaPredicted RBP17.22■□□□□ 0.35
CLN5-208ENST00000636183 Q9H521 79 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 DBNLQ9UJU6 430 aaKnown RBP17.22■□□□□ 0.35
CLN5-208ENST00000636183 HSPA8P11142 646 aaKnown RBP17.22■□□□□ 0.35
CLN5-208ENST00000636183 ARHGEF25Q86VW2 580 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 TRIM48Q8IWZ4 208 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 NUP153P49790 1475 aaKnown RBP17.22■□□□□ 0.35
CLN5-208ENST00000636183 ADRA2BP18089 450 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 TAF1BQ53T94 588 aaPredicted RBP17.22■□□□□ 0.35
CLN5-208ENST00000636183 ATP11BQ9Y2G3 1177 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 ATP7AQ04656 1500 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 CENPAP49450 140 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 CPVLQ9H3G5 476 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 CUEDC2Q9H467 287 aa17.22■□□□□ 0.35
CLN5-208ENST00000636183 SCHIP1Q9P0W5 487 aaPredicted RBP17.22■□□□□ 0.35
CLN5-208ENST00000636183 PLCG1P19174 1290 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 EEF1B2P24534 225 aaKnown RBP17.21■□□□□ 0.35
CLN5-208ENST00000636183 SMIM5Q71RC9 77 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 DAAM1Q9Y4D1 1078 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 CARMIL3Q8ND23 1372 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 TRAPPC3O43617 180 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 OR1G1P47890 313 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 CLNS1AP54105 237 aaKnown RBP17.21■□□□□ 0.35
CLN5-208ENST00000636183 PPP1R2P3Q6NXS1 205 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 HAUS6Q7Z4H7 955 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 PODNQ7Z5L7 613 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 CCL15-CCL14A0A0B4J2E2 113 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 ZNF235Q14590 738 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 CCL15Q16663 113 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 TOGARAM2Q6ZUX3 1019 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 RNF135Q8IUD6 432 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 DYDC2Q96IM9 177 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 CD209Q9NNX6 404 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 PCDHA7Q9UN72 937 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 PLS3P13797 630 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 PLTPP55058 493 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 POU5F1BQ06416 359 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 BRINP3Q76B58 766 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 ABCC12Q96J65 1359 aa17.21■□□□□ 0.35
CLN5-208ENST00000636183 UBE4BO95155 1302 aa17.21■□□□□ 0.34
CLN5-208ENST00000636183 IL9RQ01113 521 aa17.2■□□□□ 0.34
CLN5-208ENST00000636183 NR5A1Q13285 461 aa17.2■□□□□ 0.34
CLN5-208ENST00000636183 ANKRD40Q6AI12 368 aa17.2■□□□□ 0.34
CLN5-208ENST00000636183 ZNF512Q96ME7 567 aaPredicted RBP17.2■□□□□ 0.34
CLN5-208ENST00000636183 CACNA2D2Q9NY47 1150 aa17.2■□□□□ 0.34
CLN5-208ENST00000636183 NARFQ9UHQ1 456 aa17.2■□□□□ 0.34
CLN5-208ENST00000636183 INSRP06213 1382 aa17.2■□□□□ 0.34
CLN5-208ENST00000636183 UBXN8O00124 270 aa17.2■□□□□ 0.34
CLN5-208ENST00000636183 RASGRF1Q13972 1273 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms