RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 PELI3Q8N2H9 469 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF280CQ8ND82 737 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 ZPLD1Q8TCW7 415 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 C7orf43Q8WVR3 580 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 NLRP7Q8WX94 980 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 CPA5Q8WXQ8 436 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 DLG3Q92796 817 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 RNF25Q96BH1 459 aaPredicted RBP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 DUX3Q96PT4 197 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 DPYSL5Q9BPU6 564 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 DPH2Q9BQC3 489 aaPredicted RBP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 QTRT1Q9BXR0 403 aaKnown RBP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 FOXP1Q9H334 677 aaPredicted RBP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 ATXN3LQ9H3M9 355 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 PLEKHA4Q9H4M7 779 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 GORASP2Q9H8Y8 452 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 MLXIPQ9HAP2 919 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 NCOA5Q9HCD5 579 aaKnown RBP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 PCDH18Q9HCL0 1135 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF304Q9HCX3 659 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 SSU72Q9NP77 194 aaKnown RBP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 IL17RBQ9NRM6 502 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF586Q9NXT0 402 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 PLA2G3Q9NZ20 509 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 FTSJ1Q9UET6 329 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 ADAM21Q9UKJ8 722 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 OAZ3Q9UMX2 235 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 PCDHGC3Q9UN70 934 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 MAGED2Q9UNF1 606 aaPredicted RBP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 CDC14AQ9UNH5 594 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 PCDHA11Q9Y5I1 949 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 SONP18583 2426 aaKnown RBP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 CACNA1EQ15878 2313 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 SYNGAP1Q96PV0 1343 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 FLNAP21333 2647 aaKnown RBP-0.66□□□□□ -2.51
CDKL5-210ENST00000636046 CUL9Q8IWT3 2517 aa-0.66□□□□□ -2.51
CDKL5-210ENST00000636046 UBR5O95071 2799 aaPredicted RBP-0.66□□□□□ -2.51
CDKL5-210ENST00000636046 TENM2Q9NT68 2774 aa-0.66□□□□□ -2.51
CDKL5-210ENST00000636046 PALLDQ8WX93 1383 aa-0.66□□□□□ -2.51
CDKL5-210ENST00000636046 MYO16Q9Y6X6 1858 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 MUC21A0A0G2JKD1 596 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 LY6G6EA0A0G2JKS1 128 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 MUC21A0A140T8X8 626 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 SPDYE16A6NNV3 312 aaPredicted RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 F8W031 263 aaPredicted RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 CCNT1O60563 726 aaKnown RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 LPXNO60711 386 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 AGFG2O95081 481 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 WISP3O95389 354 aaPredicted RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 CYBBP04839 570 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 ZNF853P0CG23 659 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 EGR2P11161 476 aaPredicted RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 COL6A2P12110 1019 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 EDN3P14138 238 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 MPLP40238 635 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 KIR2DL1P43626 348 aaPredicted RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 KIR2DL2P43627 348 aaPredicted RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 KCNJ5P48544 419 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 GPM6AP51674 278 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 ZNF136P52737 540 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 UCNP55089 124 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 DLX5P56178 289 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 GRIK2Q13002 908 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 DUSP8Q13202 625 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 TBX2Q13207 712 aaPredicted RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 PTGDRQ13258 359 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 MTMR2Q13614 643 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 IKBKEQ14164 716 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 TRIP6Q15654 476 aaKnown RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 IZUMO4Q1ZYL8 232 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 Q4G0T1 1027 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 HSF5Q4G112 596 aaPredicted RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 CCDC157Q569K6 752 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 MUC21Q5SSG8 566 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 NADSYN1Q6IA69 706 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 ARMCX5Q6P1M9 558 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 PDXDC1Q6P996 788 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 PAQR3Q6TCH7 311 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 LBX2Q6XYB7 198 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 BRD3OSQ6XYD6 125 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 Q6ZRM9 215 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 ADGRD2Q7Z7M1 963 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 RTN4RL2Q86UN3 420 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 TMEM192Q8IY95 271 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 TNS4Q8IZW8 715 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 SLC44A3Q8N4M1 653 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 DAGLBQ8NCG7 672 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 NUP43Q8NFH3 380 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 PRSS3P2Q8NHM4 247 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 TRIM63Q969Q1 353 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 ACSF2Q96CM8 615 aaPredicted RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 SENP5Q96HI0 755 aaPredicted RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 SPACA7Q96KW9 195 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 SUSD3Q96L08 255 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 UROC1Q96N76 676 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 ZIM3Q96PE6 472 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 FANCD2OSQ96PS1 177 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 FAM193BQ96PV7 902 aaPredicted RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 SYT3Q9BQG1 590 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 PRSS22Q9GZN4 317 aa-0.66□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms