RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.56□□□□□ -0.88
AP000542.3-201ENST00000623391 RAVER2Q9HCJ3 691 aaKnown RBP9.56□□□□□ -0.88
AP000542.3-201ENST00000623391 IFT172Q9UG01 1749 aa9.56□□□□□ -0.88
AP000542.3-201ENST00000623391 ZBTB24O43167 697 aaPredicted RBP9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 IFNB1P01574 187 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 INHBAP08476 426 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 AKR1B1P15121 316 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 FXR2P51116 673 aaKnown RBP eCLIP9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 VAMP7P51809 220 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 DR1Q01658 176 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 SIX6OS1Q8N1H7 587 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 TMEM35BQ8NCS4 154 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 ASNSD1Q9NWL6 643 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 HMGB1P1B2RPK0 211 aaPredicted RBP9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 KIF28PB7ZC32 967 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 RFC5P40937 340 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 CACNB1Q02641 598 aaPredicted RBP9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 EFCAB13Q8IY85 973 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 GPD1LQ8N335 351 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 NME8Q8N427 588 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 KCTD6Q8NC69 237 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 ACRBPQ8NEB7 543 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 PSPC1Q8WXF1 523 aaKnown RBP9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 PDLIM2Q96JY6 352 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 DDX23Q9BUQ8 820 aaKnown RBP9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 INTS2Q9H0H0 1204 aaKnown RBP9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 ZHX1Q9UKY1 873 aaPredicted RBP9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 CAPN11Q9UMQ6 739 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 DTNBO60941 627 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 SH3BGRP55822 239 aaPredicted RBP9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 ERICH1Q86X53 443 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 LRRC8CQ8TDW0 803 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 TTC1Q99614 292 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 LRRC4Q9HBW1 653 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 ZHX2Q9Y6X8 837 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 A0A1W2PQJ5 194 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 RHOBTB3O94955 611 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 S100BP04271 92 aaPredicted RBP9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 IFRD2Q12894 506 aaPredicted RBP9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 FAM182BQ5T319 152 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 C6orf118Q5T5N4 469 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 RAB44Q7Z6P3 723 aaPredicted RBP9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 TTC25Q96NG3 672 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 GDAQ9Y2T3 454 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 STXBP3O00186 592 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 KCNQ2O43526 872 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 FCER1AP12319 257 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 HOXD10P28358 340 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 SDCCAG8Q86SQ7 713 aaPredicted RBP9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 SESTD1Q86VW0 696 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 WNT8AQ9H1J5 351 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 CCDC68Q9H2F9 335 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 ZDHHC9Q9Y397 364 aa9.55□□□□□ -0.88
AP000542.3-201ENST00000623391 POTEMA6NI47 508 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 CLDN3O15551 220 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 NMT2O60551 498 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 CPP00450 1065 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 NFKBIAP25963 317 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 DPYDQ12882 1025 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 STILQ15468 1287 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 INTS5Q6P9B9 1019 aaKnown RBP9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 EHD4Q9H223 541 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 PCDHA10Q9Y5I2 948 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 PITPNM2Q9BZ72 1349 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 SUN1O94901 812 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 TFDP2Q14188 446 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 SYDE1Q6ZW31 735 aaPredicted RBP9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 IP6K2Q9UHH9 426 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 TUBE1Q9UJT0 475 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 COL5A2P05997 1499 aaPredicted RBP9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 FAM187AA6NFU0 413 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 P4HA2O15460 535 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 SORBS3O60504 671 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 SLC25A27O95847 323 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 TRIM56Q9BRZ2 755 aaKnown RBP9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 LXNQ9BS40 222 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 GCOM2Q9BZD3 368 aaPredicted RBP9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 EPB41L5Q9HCM4 733 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 TMEM260Q9NX78 707 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 SLC9A2Q9UBY0 812 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 CNTNAP5Q8WYK1 1306 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 FKBP1AP62942 108 aaKnown RBP9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 KCNH2Q12809 1159 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 EDRF1Q3B7T1 1238 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 CEP55Q53EZ4 464 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 CDC42EP5Q6NZY7 148 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 PDXDC1Q6P996 788 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 ZBTB33Q86T24 672 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 LDHDQ86WU2 507 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 CHST13Q8NET6 341 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 ZC3H15Q8WU90 426 aaKnown RBP9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 HEXIM2Q96MH2 286 aaKnown RBP9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 RIT2Q99578 217 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 ZMYND12Q9H0C1 365 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 RPAP3Q9H6T3 665 aaPredicted RBP9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 ZNF70Q9UC06 446 aaPredicted RBP9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 UBR1Q8IWV7 1749 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 TARSL2A2RTX5 802 aaKnown RBP9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 PRR29P0C7W0 189 aa9.54□□□□□ -0.88
AP000542.3-201ENST00000623391 SLC1A1P43005 524 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms