RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 DNM3Q9UQ16 869 aa20.72■□□□□ 0.91
CIRBP-245ENST00000621399 IGKV6-21A0A0C4DH24 114 aa20.71■□□□□ 0.91
CIRBP-245ENST00000621399 M0QZ92 97 aa20.71■□□□□ 0.91
CIRBP-245ENST00000621399 SLC26A4O43511 780 aa20.71■□□□□ 0.91
CIRBP-245ENST00000621399 PARNO95453 639 aaKnown RBP20.71■□□□□ 0.91
CIRBP-245ENST00000621399 MRPS6P82932 125 aaKnown RBP20.71■□□□□ 0.91
CIRBP-245ENST00000621399 FAM26DQ5JW98 314 aa20.71■□□□□ 0.91
CIRBP-245ENST00000621399 DEFB128Q7Z7B8 93 aa20.71■□□□□ 0.91
CIRBP-245ENST00000621399 RPUSD2Q8IZ73 545 aaKnown RBP20.71■□□□□ 0.91
CIRBP-245ENST00000621399 LINC01465Q8N7H1 131 aa20.71■□□□□ 0.91
CIRBP-245ENST00000621399 RASSF8Q8NHQ8 419 aa20.71■□□□□ 0.91
CIRBP-245ENST00000621399 CALML4Q96GE6 196 aa20.71■□□□□ 0.91
CIRBP-245ENST00000621399 CHAMP1Q96JM3 812 aa20.71■□□□□ 0.91
CIRBP-245ENST00000621399 PNMA5Q96PV4 448 aa20.71■□□□□ 0.91
CIRBP-245ENST00000621399 MAP7D2Q96T17 732 aa20.71■□□□□ 0.91
CIRBP-245ENST00000621399 PLIN2Q99541 437 aa20.71■□□□□ 0.91
CIRBP-245ENST00000621399 UBE2OQ9C0C9 1292 aaKnown RBP20.71■□□□□ 0.91
CIRBP-245ENST00000621399 NT5C3AQ9H0P0 336 aa20.71■□□□□ 0.91
CIRBP-245ENST00000621399 BMP2KQ9NSY1 1161 aaPredicted RBP20.71■□□□□ 0.91
CIRBP-245ENST00000621399 RCOR1Q9UKL0 485 aa20.71■□□□□ 0.91
CIRBP-245ENST00000621399 AKT3Q9Y243 479 aa20.71■□□□□ 0.91
CIRBP-245ENST00000621399 ARHGEF35A5YM69 484 aa20.7■□□□□ 0.9
CIRBP-245ENST00000621399 E9PMD0 336 aa20.7■□□□□ 0.9
CIRBP-245ENST00000621399 CHRNA1P02708 482 aa20.7■□□□□ 0.9
CIRBP-245ENST00000621399 ME1P48163 572 aa20.7■□□□□ 0.9
CIRBP-245ENST00000621399 GRB10Q13322 594 aa20.7■□□□□ 0.9
CIRBP-245ENST00000621399 HYIQ5T013 277 aa20.7■□□□□ 0.9
CIRBP-245ENST00000621399 CHRDL2Q6WN34 429 aa20.7■□□□□ 0.9
CIRBP-245ENST00000621399 KCTD17Q8N5Z5 321 aa20.7■□□□□ 0.9
CIRBP-245ENST00000621399 EPSTI1Q96J88 318 aa20.7■□□□□ 0.9
CIRBP-245ENST00000621399 DHX33Q9H6R0 707 aaKnown RBP20.7■□□□□ 0.9
CIRBP-245ENST00000621399 IL23AQ9NPF7 189 aa20.7■□□□□ 0.9
CIRBP-245ENST00000621399 CDY2AQ9Y6F7 541 aa20.7■□□□□ 0.9
CIRBP-245ENST00000621399 TRIP12Q14669 1992 aaPredicted RBP20.7■□□□□ 0.9
CIRBP-245ENST00000621399 KAT6AQ92794 2004 aa20.7■□□□□ 0.9
CIRBP-245ENST00000621399 CUTAO60888 179 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 DGAT1O75907 488 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 VTNP04004 478 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 ACRP10323 421 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 TXLNAP40222 546 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 EPHB4P54760 987 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 MGAT3Q09327 533 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 MKRN4PQ13434 485 aaPredicted RBP20.69■□□□□ 0.9
CIRBP-245ENST00000621399 DRP2Q13474 957 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 MBTPS1Q14703 1052 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 EMC2Q15006 297 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 USP49Q70CQ1 688 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 SYMPKQ92797 1274 aaKnown RBP20.69■□□□□ 0.9
CIRBP-245ENST00000621399 SPATA32Q96LK8 384 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 MTRQ99707 1265 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 CELF4Q9BZC1 486 aaKnown RBP20.69■□□□□ 0.9
CIRBP-245ENST00000621399 CCSER1Q9C0I3 900 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 BHMT2Q9H2M3 363 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 ATP6V0A4Q9HBG4 840 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 SUCLA2Q9P2R7 463 aaPredicted RBP20.69■□□□□ 0.9
CIRBP-245ENST00000621399 GINS2Q9Y248 185 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 TRPV2Q9Y5S1 764 aa20.69■□□□□ 0.9
CIRBP-245ENST00000621399 USO1O60763 962 aaKnown RBP20.68■□□□□ 0.9
CIRBP-245ENST00000621399 NBNO60934 754 aa20.68■□□□□ 0.9
CIRBP-245ENST00000621399 EYA4O95677 639 aa20.68■□□□□ 0.9
CIRBP-245ENST00000621399 GPNMBQ14956 572 aa20.68■□□□□ 0.9
CIRBP-245ENST00000621399 KARSQ15046 597 aaKnown RBP20.68■□□□□ 0.9
CIRBP-245ENST00000621399 TMEM119Q4V9L6 283 aa20.68■□□□□ 0.9
CIRBP-245ENST00000621399 PADI6Q6TGC4 694 aa20.68■□□□□ 0.9
CIRBP-245ENST00000621399 KCNK18Q7Z418 384 aa20.68■□□□□ 0.9
CIRBP-245ENST00000621399 TMEM143Q96AN5 459 aa20.68■□□□□ 0.9
CIRBP-245ENST00000621399 IPO9Q96P70 1041 aaKnown RBP20.68■□□□□ 0.9
CIRBP-245ENST00000621399 PPP1R16BQ96T49 567 aa20.68■□□□□ 0.9
CIRBP-245ENST00000621399 CHMP5Q9NZZ3 219 aa20.68■□□□□ 0.9
CIRBP-245ENST00000621399 CCDC39Q9UFE4 941 aa20.68■□□□□ 0.9
CIRBP-245ENST00000621399 WDR81Q562E7 1941 aa20.68■□□□□ 0.9
CIRBP-245ENST00000621399 LTBP2Q14767 1821 aa20.67■□□□□ 0.9
CIRBP-245ENST00000621399 GAS2O43903 313 aaKnown RBP20.67■□□□□ 0.9
CIRBP-245ENST00000621399 PFKMP08237 780 aa20.67■□□□□ 0.9
CIRBP-245ENST00000621399 BMP8BP34820 402 aa20.67■□□□□ 0.9
CIRBP-245ENST00000621399 KIZQ2M2Z5 673 aa20.67■□□□□ 0.9
CIRBP-245ENST00000621399 C16orf59Q7L2K0 433 aa20.67■□□□□ 0.9
CIRBP-245ENST00000621399 ZNF710Q8N1W2 664 aa20.67■□□□□ 0.9
CIRBP-245ENST00000621399 LEO1Q8WVC0 666 aaPredicted RBP20.67■□□□□ 0.9
CIRBP-245ENST00000621399 TCP11Q8WWU5 503 aa20.67■□□□□ 0.9
CIRBP-245ENST00000621399 SCAND2PQ9GZW5 306 aaPredicted RBP20.67■□□□□ 0.9
CIRBP-245ENST00000621399 PCDHA7Q9UN72 937 aa20.67■□□□□ 0.9
CIRBP-245ENST00000621399 FGBP02675 491 aa20.66■□□□□ 0.9
CIRBP-245ENST00000621399 CXCL10P02778 98 aa20.66■□□□□ 0.9
CIRBP-245ENST00000621399 SSBP05455 408 aaKnown RBP eCLIP20.66■□□□□ 0.9
CIRBP-245ENST00000621399 GHRP10912 638 aa20.66■□□□□ 0.9
CIRBP-245ENST00000621399 PLCG1P19174 1290 aa20.66■□□□□ 0.9
CIRBP-245ENST00000621399 NLRP11P59045 1033 aaKnown RBP20.66■□□□□ 0.9
CIRBP-245ENST00000621399 CDC42EP1Q00587 391 aa20.66■□□□□ 0.9
CIRBP-245ENST00000621399 PSRC1Q6PGN9 363 aaPredicted RBP20.66■□□□□ 0.9
CIRBP-245ENST00000621399 ZNF365Q70YC5 407 aa20.66■□□□□ 0.9
CIRBP-245ENST00000621399 MAEAQ7L5Y9 396 aa20.66■□□□□ 0.9
CIRBP-245ENST00000621399 RHPN2Q8IUC4 686 aa20.66■□□□□ 0.9
CIRBP-245ENST00000621399 PRPF31Q8WWY3 499 aaKnown RBP20.66■□□□□ 0.9
CIRBP-245ENST00000621399 PSPC1Q8WXF1 523 aaKnown RBP20.66■□□□□ 0.9
CIRBP-245ENST00000621399 VWCEQ96DN2 955 aa20.66■□□□□ 0.9
CIRBP-245ENST00000621399 SCLT1Q96NL6 688 aa20.66■□□□□ 0.9
CIRBP-245ENST00000621399 CDHR5Q9HBB8 845 aa20.66■□□□□ 0.9
CIRBP-245ENST00000621399 XPNPEP1Q9NQW7 623 aa20.66■□□□□ 0.9
CIRBP-245ENST00000621399 MYH15Q9Y2K3 1946 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms