RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 CAND2O75155 1236 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 CASP4P49662 377 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 PTENP60484 403 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 IFFO1Q0D2I5 559 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 XRCC4Q13426 336 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 TCERG1LQ5VWI1 586 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 USP17L15C9J2P7 530 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 USP17L13C9JLJ4 530 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 USP17L11C9JVI0 530 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 USP17L18D6R9N7 530 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 USP17L22D6RA61 530 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 USP17L17D6RBQ6 530 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 USP17L19D6RCP7 530 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 USP17L20D6RJB6 530 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 GFPT2O94808 682 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 NR3C1P04150 777 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 FERP16591 822 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 USP17L24Q0WX57 530 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 NEDD9Q14511 834 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 USP17L6PQ6QN14 398 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 CATSPER3Q86XQ3 398 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 CHMP6Q96FZ7 201 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 MBOAT7Q96N66 472 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 KDM4CQ9H3R0 1056 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 ZDHHC18Q9NUE0 388 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 PNMA2Q9UL42 364 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 SLC16A3O15427 465 aaKnown RBP21.27■■□□□ 1
PDLIM3-212ENST00000620787 TTLL1O95922 423 aa21.27■■□□□ 1
PDLIM3-212ENST00000620787 GHRP10912 638 aa21.27■■□□□ 1
PDLIM3-212ENST00000620787 SPIRE1Q08AE8 756 aa21.27■■□□□ 1
PDLIM3-212ENST00000620787 DUPD1Q68J44 220 aa21.27■■□□□ 1
PDLIM3-212ENST00000620787 HVCN1Q96D96 273 aa21.27■■□□□ 1
PDLIM3-212ENST00000620787 MXD3Q9BW11 206 aa21.27■■□□□ 1
PDLIM3-212ENST00000620787 RAB17Q9H0T7 212 aa21.27■■□□□ 1
PDLIM3-212ENST00000620787 METTL14Q9HCE5 456 aaKnown RBP21.27■■□□□ 1
PDLIM3-212ENST00000620787 TYW1Q9NV66 732 aaKnown RBP21.27■■□□□ 1
PDLIM3-212ENST00000620787 PPP1R9AQ9ULJ8 1098 aa21.27■■□□□ 1
PDLIM3-212ENST00000620787 TPX2Q9ULW0 747 aaKnown RBP21.27■■□□□ 1
PDLIM3-212ENST00000620787 CYP3A7-CYP3A51PA0A087WV96 503 aa21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 C21orf2O43822 256 aa21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 RPS6KA4O75676 772 aa21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 SHBGP04278 402 aa21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 CYP3A7P24462 503 aa21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 PABPC4Q13310 644 aaKnown RBP eCLIP21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 BMT2Q1RMZ1 405 aa21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 IGSF9BQ9UPX0 1349 aa21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 GREB1LQ9C091 1923 aaPredicted RBP21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 EVI5O60447 810 aa21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 DNAJC8O75937 253 aaPredicted RBP21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 IL1R1P14778 569 aa21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 GPSM2P81274 684 aa21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 PPATQ06203 517 aa21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 TAX1BP1Q86VP1 789 aa21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 CCDC50Q8IVM0 306 aa21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 SYT2Q8N9I0 419 aaPredicted RBP21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 SLC35G2Q8TBE7 412 aa21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 MAGEC3Q8TD91 643 aa21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 ZNF317Q96PQ6 595 aaPredicted RBP21.26■□□□□ 0.99
PDLIM3-212ENST00000620787 C10orf71Q711Q0 1435 aa21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 GTPBP10A4D1E9 387 aaKnown RBP21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 MEIS1O00470 390 aa21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 ATP2C2O75185 946 aa21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 NUDT17P0C025 328 aa21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 HOOK3Q86VS8 718 aa21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 RFFLQ8WZ73 363 aa21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 ANO3Q9BYT9 981 aa21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 ERVK-5Q9HDB9 667 aa21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 RTCBQ9Y3I0 505 aaKnown RBP21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 TMEM253P0C7T8 217 aa21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 SPATA31C1P0DKV0 1188 aa21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 STAT1P42224 750 aa21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 DR1Q01658 176 aa21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 MFSD14BQ5SR56 506 aa21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 KCTD1Q719H9 257 aa21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 SLFN12Q8IYM2 578 aa21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 ERP44Q9BS26 406 aa21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 DIS3Q9Y2L1 958 aaKnown RBP21.25■□□□□ 0.99
PDLIM3-212ENST00000620787 RSPH10B2B2RC85 870 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 CTNND1O60716 968 aaKnown RBP21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 RSPH10BP0C881 870 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 COPB2P35606 906 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 KLRC3Q07444 240 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 PLS1Q14651 629 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 CHADLQ6NUI6 762 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 GLYCTKQ8IVS8 523 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 GIMAP7Q8NHV1 300 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 ETNPPLQ8TBG4 499 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 BORCS6Q96GS4 357 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 BCAS3Q9H6U6 928 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 MYO3BQ8WXR4 1341 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 SPDYE3A6NKU9 549 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 OPLAHO14841 1288 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 CLIC2O15247 247 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 CHN1P15882 459 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 RPL13P26373 211 aaKnown RBP21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 SOX5P35711 763 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 PICALMQ13492 652 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 GPATCH4Q5T3I0 446 aaKnown RBP21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 RC3H1Q5TC82 1133 aaKnown RBP21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 SLF2Q8IX21 1173 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms