RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 ILDR1Q86SU0 546 aaPredicted RBP8.99□□□□□ -0.97
ALMS1-208ENST00000620466 BANK1Q8NDB2 785 aa8.99□□□□□ -0.97
ALMS1-208ENST00000620466 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.99□□□□□ -0.97
ALMS1-208ENST00000620466 VIPAS39Q9H9C1 493 aa8.99□□□□□ -0.97
ALMS1-208ENST00000620466 SUGCTQ9HAC7 445 aa8.99□□□□□ -0.97
ALMS1-208ENST00000620466 SNX24Q9Y343 169 aa8.99□□□□□ -0.97
ALMS1-208ENST00000620466 KRT3P12035 628 aa8.99□□□□□ -0.97
ALMS1-208ENST00000620466 TOB1P50616 345 aaPredicted RBP8.99□□□□□ -0.97
ALMS1-208ENST00000620466 CYP4F22Q6NT55 531 aa8.99□□□□□ -0.97
ALMS1-208ENST00000620466 NLRP14Q86W24 1093 aa8.99□□□□□ -0.97
ALMS1-208ENST00000620466 HAUS1Q96CS2 278 aa8.99□□□□□ -0.97
ALMS1-208ENST00000620466 DYDC2Q96IM9 177 aa8.99□□□□□ -0.97
ALMS1-208ENST00000620466 TAF1DQ9H5J8 278 aaPredicted RBP8.99□□□□□ -0.97
ALMS1-208ENST00000620466 IPO11Q9UI26 975 aaKnown RBP8.99□□□□□ -0.97
ALMS1-208ENST00000620466 FHOD1Q9Y613 1164 aa8.99□□□□□ -0.97
ALMS1-208ENST00000620466 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.98□□□□□ -0.97
ALMS1-208ENST00000620466 PLA2G4AP47712 749 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 CACNB3P54284 484 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 SESN3P58005 492 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 MIS18BP1Q6P0N0 1132 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 ARHGEF18Q6ZSZ5 1173 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 ATP6V1G3Q96LB4 118 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 DNAJC17Q9NVM6 304 aaKnown RBP8.98□□□□□ -0.97
ALMS1-208ENST00000620466 TFR2Q9UP52 801 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 KDM6AO15550 1401 aaPredicted RBP8.98□□□□□ -0.97
ALMS1-208ENST00000620466 MMEP08473 750 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 RPS6KA2Q15349 733 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 CCDC38Q502W7 563 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 NAALADL2Q58DX5 795 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 INTS2Q9H0H0 1204 aaKnown RBP8.98□□□□□ -0.97
ALMS1-208ENST00000620466 NRBP2Q9NSY0 501 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 TXNDC9O14530 226 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 TMOD1P28289 359 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 PRELPP51888 382 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 MAGOHP61326 146 aaKnown RBP8.98□□□□□ -0.97
ALMS1-208ENST00000620466 ERVK-24P63145 666 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 SBK1Q52WX2 424 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 MUM1L1Q5H9M0 696 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 PDZD4Q76G19 769 aaPredicted RBP8.98□□□□□ -0.97
ALMS1-208ENST00000620466 DPP9Q86TI2 863 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 DDX47Q9H0S4 455 aaKnown RBP8.98□□□□□ -0.97
ALMS1-208ENST00000620466 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.98□□□□□ -0.97
ALMS1-208ENST00000620466 MYO5BQ9ULV0 1848 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 TMEM191BP0C7N4 346 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 H2AFXP16104 143 aaPredicted RBP8.98□□□□□ -0.97
ALMS1-208ENST00000620466 SAT1P21673 171 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 PMS2P54278 862 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 RWDD2BP57060 319 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 ZNF211Q13398 564 aaPredicted RBP8.98□□□□□ -0.97
ALMS1-208ENST00000620466 TSTA3Q13630 321 aaPredicted RBP8.98□□□□□ -0.97
ALMS1-208ENST00000620466 ANKRD36BP1Q96IX9 119 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 SMARCAL1Q9NZC9 954 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 PFDN6O15212 129 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 WDR46O15213 610 aaKnown RBP8.98□□□□□ -0.97
ALMS1-208ENST00000620466 CRKP46108 304 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 PPP2R2AP63151 447 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 E2F4Q16254 413 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 BEND6Q5SZJ8 279 aaPredicted RBP8.98□□□□□ -0.97
ALMS1-208ENST00000620466 MIPOL1Q8TD10 442 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 PNKPQ96T60 521 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 A6NJR5 290 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 CAMTA2O94983 1202 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 ACSL3O95573 720 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 HDLBPQ00341 1268 aaKnown RBP8.98□□□□□ -0.97
ALMS1-208ENST00000620466 NCAPHQ15003 741 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 SRLQ86TD4 932 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 METTL23Q86XA0 190 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 GIMAP8Q8ND71 665 aaPredicted RBP8.98□□□□□ -0.97
ALMS1-208ENST00000620466 MICAL1Q8TDZ2 1067 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 MXD3Q9BW11 206 aa8.98□□□□□ -0.97
ALMS1-208ENST00000620466 GARSP41250 739 aaKnown RBP8.97□□□□□ -0.97
ALMS1-208ENST00000620466 ALCAMQ13740 583 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 CCNI2Q6ZMN8 369 aaPredicted RBP8.97□□□□□ -0.97
ALMS1-208ENST00000620466 MMS22LQ6ZRQ5 1243 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 TMEM179Q6ZVK1 233 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 RYBPQ8N488 228 aaPredicted RBP8.97□□□□□ -0.97
ALMS1-208ENST00000620466 CEP170P1Q96L14 293 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 AGXT2Q9BYV1 514 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 SYNGAP1Q96PV0 1343 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 A0A1W2PQJ5 194 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 FAM196BA6NMK8 535 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 STK4Q13043 487 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 NOA1Q8NC60 698 aaKnown RBP8.97□□□□□ -0.97
ALMS1-208ENST00000620466 LRRN4CLQ8ND94 238 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 NEDD1Q8NHV4 660 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 ELAC2Q9BQ52 826 aaKnown RBP8.97□□□□□ -0.97
ALMS1-208ENST00000620466 AP5M1Q9H0R1 490 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 TMEM60Q9H2L4 133 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 PODXLO00592 558 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 KIF3CO14782 793 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 YWHAGP61981 247 aaKnown RBP eCLIP8.97□□□□□ -0.97
ALMS1-208ENST00000620466 ARHGAP4P98171 946 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 ATP6V0A1Q93050 837 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 PRKAG2Q9UGJ0 569 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 GOLGA8CPA6NN73 597 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 SART1O43290 800 aaKnown RBP8.97□□□□□ -0.97
ALMS1-208ENST00000620466 AKR1B1P15121 316 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 DYNLT1P63172 113 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 GUCY1A3Q02108 690 aa8.97□□□□□ -0.97
ALMS1-208ENST00000620466 SMIM5Q71RC9 77 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms