RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 VPS54Q9P1Q0 977 aa24.98■■□□□ 1.59
SRRT-218ENST00000620394 ZBTB42B2RXF5 422 aa24.97■■□□□ 1.59
SRRT-218ENST00000620394 EDIL3O43854 480 aa24.97■■□□□ 1.59
SRRT-218ENST00000620394 NRIP1P48552 1158 aa24.97■■□□□ 1.59
SRRT-218ENST00000620394 CCT2P78371 535 aaKnown RBP24.97■■□□□ 1.59
SRRT-218ENST00000620394 KRT76Q01546 638 aa24.97■■□□□ 1.59
SRRT-218ENST00000620394 PDXDC2PQ6P474 469 aa24.97■■□□□ 1.59
SRRT-218ENST00000620394 POF1BQ8WVV4 589 aa24.97■■□□□ 1.59
SRRT-218ENST00000620394 SNX27Q96L92 541 aa24.97■■□□□ 1.59
SRRT-218ENST00000620394 CELF4Q9BZC1 486 aaKnown RBP24.97■■□□□ 1.59
SRRT-218ENST00000620394 MAFBQ9Y5Q3 323 aaPredicted RBP24.97■■□□□ 1.59
SRRT-218ENST00000620394 CYP46A1Q9Y6A2 500 aa24.97■■□□□ 1.59
SRRT-218ENST00000620394 FSD2A1L4K1 749 aa24.96■■□□□ 1.59
SRRT-218ENST00000620394 PPFIA3O75145 1194 aa24.96■■□□□ 1.59
SRRT-218ENST00000620394 ATP4AP20648 1035 aa24.96■■□□□ 1.59
SRRT-218ENST00000620394 ZXDAP98168 799 aa24.96■■□□□ 1.59
SRRT-218ENST00000620394 PAK2Q13177 524 aa24.96■■□□□ 1.59
SRRT-218ENST00000620394 PAN2Q504Q3 1202 aaKnown RBP24.96■■□□□ 1.59
SRRT-218ENST00000620394 PRR16Q569H4 304 aa24.96■■□□□ 1.59
SRRT-218ENST00000620394 ZNF484Q5JVG2 852 aa24.96■■□□□ 1.59
SRRT-218ENST00000620394 FAM43BQ6ZT52 329 aaPredicted RBP24.96■■□□□ 1.59
SRRT-218ENST00000620394 ZNF274Q96GC6 653 aaPredicted RBP24.96■■□□□ 1.59
SRRT-218ENST00000620394 PHOX2BQ99453 314 aa24.96■■□□□ 1.59
SRRT-218ENST00000620394 BARX2Q9UMQ3 279 aaPredicted RBP24.96■■□□□ 1.59
SRRT-218ENST00000620394 USP15Q9Y4E8 981 aaPredicted RBP24.96■■□□□ 1.59
SRRT-218ENST00000620394 FNDC1Q4ZHG4 1894 aaPredicted RBP24.96■■□□□ 1.59
SRRT-218ENST00000620394 GLP2RO95838 553 aa24.95■■□□□ 1.58
SRRT-218ENST00000620394 KLRC1P26715 233 aa24.95■■□□□ 1.58
SRRT-218ENST00000620394 TMEM62Q0P6H9 643 aa24.95■■□□□ 1.58
SRRT-218ENST00000620394 SWSAP1Q6NVH7 229 aa24.95■■□□□ 1.58
SRRT-218ENST00000620394 TRIM22Q8IYM9 498 aa24.95■■□□□ 1.58
SRRT-218ENST00000620394 FAM177A1Q8N128 213 aaPredicted RBP24.95■■□□□ 1.58
SRRT-218ENST00000620394 FBXL6Q8N531 539 aa24.95■■□□□ 1.58
SRRT-218ENST00000620394 BBXQ8WY36 941 aaPredicted RBP24.95■■□□□ 1.58
SRRT-218ENST00000620394 PHF7Q9BWX1 381 aaPredicted RBP24.95■■□□□ 1.58
SRRT-218ENST00000620394 PADI3Q9ULW8 664 aa24.95■■□□□ 1.58
SRRT-218ENST00000620394 TRIOO75962 3097 aa24.95■■□□□ 1.58
SRRT-218ENST00000620394 RTN4RL1Q86UN2 441 aaPredicted RBP24.94■■□□□ 1.58
SRRT-218ENST00000620394 KIAA0319LQ8IZA0 1049 aa24.94■■□□□ 1.58
SRRT-218ENST00000620394 PCDHA10Q9Y5I2 948 aa24.94■■□□□ 1.58
SRRT-218ENST00000620394 ST18O60284 1047 aa24.93■■□□□ 1.58
SRRT-218ENST00000620394 C22orf31O95567 290 aa24.93■■□□□ 1.58
SRRT-218ENST00000620394 PSAPP07602 524 aa24.93■■□□□ 1.58
SRRT-218ENST00000620394 USP11P51784 963 aa24.93■■□□□ 1.58
SRRT-218ENST00000620394 UBE3AQ05086 875 aa24.93■■□□□ 1.58
SRRT-218ENST00000620394 SIGLEC14Q08ET2 396 aa24.93■■□□□ 1.58
SRRT-218ENST00000620394 IER5LQ5T953 404 aa24.93■■□□□ 1.58
SRRT-218ENST00000620394 TCEAL9Q9UHQ7 104 aa24.93■■□□□ 1.58
SRRT-218ENST00000620394 LRFN2Q9ULH4 789 aa24.93■■□□□ 1.58
SRRT-218ENST00000620394 M0R2N6 131 aa24.92■■□□□ 1.58
SRRT-218ENST00000620394 DEXIO95424 95 aa24.92■■□□□ 1.58
SRRT-218ENST00000620394 NEFLP07196 543 aa24.92■■□□□ 1.58
SRRT-218ENST00000620394 ATF7P17544 494 aaPredicted RBP24.92■■□□□ 1.58
SRRT-218ENST00000620394 SSRP1Q08945 709 aaKnown RBP24.92■■□□□ 1.58
SRRT-218ENST00000620394 TCF15Q12870 199 aa24.92■■□□□ 1.58
SRRT-218ENST00000620394 NPY5RQ15761 445 aa24.92■■□□□ 1.58
SRRT-218ENST00000620394 RBM23Q86U06 439 aaKnown RBP24.92■■□□□ 1.58
SRRT-218ENST00000620394 DAGLBQ8NCG7 672 aa24.92■■□□□ 1.58
SRRT-218ENST00000620394 C22orf23Q9BZE7 217 aa24.92■■□□□ 1.58
SRRT-218ENST00000620394 TMX1Q9H3N1 280 aa24.92■■□□□ 1.58
SRRT-218ENST00000620394 TLE6Q9H808 572 aa24.92■■□□□ 1.58
SRRT-218ENST00000620394 PCDHA4Q9UN74 947 aa24.92■■□□□ 1.58
SRRT-218ENST00000620394 WDR64B1ANS9 1081 aa24.91■■□□□ 1.58
SRRT-218ENST00000620394 MSH4O15457 936 aa24.91■■□□□ 1.58
SRRT-218ENST00000620394 NLRP5P59047 1200 aa24.91■■□□□ 1.58
SRRT-218ENST00000620394 SLC5A5Q92911 643 aa24.91■■□□□ 1.58
SRRT-218ENST00000620394 FAM167AQ96KS9 214 aa24.91■■□□□ 1.58
SRRT-218ENST00000620394 RIT2Q99578 217 aa24.91■■□□□ 1.58
SRRT-218ENST00000620394 CDCA3Q99618 268 aaPredicted RBP24.91■■□□□ 1.58
SRRT-218ENST00000620394 ERVK-5Q9HDB9 667 aa24.91■■□□□ 1.58
SRRT-218ENST00000620394 AAASQ9NRG9 546 aa24.91■■□□□ 1.58
SRRT-218ENST00000620394 PCDHB12Q9Y5F1 795 aa24.91■■□□□ 1.58
SRRT-218ENST00000620394 ZDBF2Q9HCK1 2354 aa24.91■■□□□ 1.58
SRRT-218ENST00000620394 CPLX1O14810 134 aa24.9■■□□□ 1.58
SRRT-218ENST00000620394 SARSP49591 514 aaKnown RBP24.9■■□□□ 1.58
SRRT-218ENST00000620394 GATMP50440 423 aa24.9■■□□□ 1.58
SRRT-218ENST00000620394 TMEM40Q8WWA1 233 aa24.9■■□□□ 1.58
SRRT-218ENST00000620394 TLR9Q9NR96 1032 aa24.9■■□□□ 1.58
SRRT-218ENST00000620394 RNF216Q9NWF9 866 aaPredicted RBP24.9■■□□□ 1.58
SRRT-218ENST00000620394 GABBR1Q9UBS5 961 aa24.9■■□□□ 1.58
SRRT-218ENST00000620394 CEP131Q9UPN4 1083 aa24.9■■□□□ 1.58
SRRT-218ENST00000620394 PCDHGC5Q9Y5F6 944 aa24.9■■□□□ 1.58
SRRT-218ENST00000620394 SRGAP2BP0DMP2 458 aa24.89■■□□□ 1.58
SRRT-218ENST00000620394 GALNT17Q6IS24 598 aa24.89■■□□□ 1.58
SRRT-218ENST00000620394 CKAP2LQ8IYA6 745 aa24.89■■□□□ 1.58
SRRT-218ENST00000620394 LINC01465Q8N7H1 131 aa24.89■■□□□ 1.58
SRRT-218ENST00000620394 TBCKQ8TEA7 893 aa24.89■■□□□ 1.58
SRRT-218ENST00000620394 SUSD6Q92537 303 aa24.89■■□□□ 1.58
SRRT-218ENST00000620394 RPGRIP1Q96KN7 1286 aa24.89■■□□□ 1.58
SRRT-218ENST00000620394 CYP3A7-CYP3A51PA0A087WV96 503 aa24.88■■□□□ 1.57
SRRT-218ENST00000620394 ZNF862O60290 1169 aa24.88■■□□□ 1.57
SRRT-218ENST00000620394 CYP3A7P24462 503 aa24.88■■□□□ 1.57
SRRT-218ENST00000620394 SFNP31947 248 aa24.88■■□□□ 1.57
SRRT-218ENST00000620394 TMEM266Q2M3C6 531 aa24.88■■□□□ 1.57
SRRT-218ENST00000620394 Q4G0T1 1027 aa24.88■■□□□ 1.57
SRRT-218ENST00000620394 PDE12Q6L8Q7 609 aaKnown RBP24.88■■□□□ 1.57
SRRT-218ENST00000620394 CPLX2Q6PUV4 134 aaKnown RBP24.88■■□□□ 1.57
SRRT-218ENST00000620394 MOXD1Q6UVY6 613 aa24.88■■□□□ 1.57
SRRT-218ENST00000620394 BLIDQ8IZY5 108 aa24.88■■□□□ 1.57
SRRT-218ENST00000620394 MICAL1Q8TDZ2 1067 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms