RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, human

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KHSRP-213	ENST00000619396	UTRN	P46939	3433 aa		32.81	■■■□□ 2.84
KHSRP-213	ENST00000619396	EML1	O00423	815 aa		32.81	■■■□□ 2.84
KHSRP-213	ENST00000619396	EIF3H	O15372	352 aa	Known RBP eCLIP	32.81	■■■□□ 2.84
KHSRP-213	ENST00000619396	RAD51C	O43502	376 aa		32.81	■■■□□ 2.84
KHSRP-213	ENST00000619396	NR3C1	P04150	777 aa		32.81	■■■□□ 2.84
KHSRP-213	ENST00000619396	ZBTB48	P10074	688 aa	Predicted RBP	32.81	■■■□□ 2.84
KHSRP-213	ENST00000619396	RUSC1	Q9BVN2	902 aa		32.81	■■■□□ 2.84
KHSRP-213	ENST00000619396	AJAP1	Q9UKB5	411 aa	Predicted RBP	32.81	■■■□□ 2.84
KHSRP-213	ENST00000619396	JAM2	P57087	298 aa		32.81	■■■□□ 2.84
KHSRP-213	ENST00000619396	TRADD	Q15628	312 aa		32.81	■■■□□ 2.84
KHSRP-213	ENST00000619396	TAF4B	Q92750	862 aa		32.81	■■■□□ 2.84
KHSRP-213	ENST00000619396	SLC35C1	Q96A29	364 aa		32.81	■■■□□ 2.84
KHSRP-213	ENST00000619396	METTL14	Q9HCE5	456 aa	Known RBP	32.81	■■■□□ 2.84
KHSRP-213	ENST00000619396	GOPC	Q9HD26	462 aa		32.81	■■■□□ 2.84
KHSRP-213	ENST00000619396	FBXO28	Q9NVF7	368 aa		32.81	■■■□□ 2.84
KHSRP-213	ENST00000619396	ZNF233	A6NK53	670 aa		32.8	■■■□□ 2.84
KHSRP-213	ENST00000619396	SLC16A3	O15427	465 aa	Known RBP	32.8	■■■□□ 2.84
KHSRP-213	ENST00000619396	CASP4	P49662	377 aa		32.8	■■■□□ 2.84
KHSRP-213	ENST00000619396	TNNC1	P63316	161 aa		32.8	■■■□□ 2.84
KHSRP-213	ENST00000619396	CFAP58	Q5T655	872 aa		32.8	■■■□□ 2.84
KHSRP-213	ENST00000619396	ALKBH5	Q6P6C2	394 aa	Known RBP	32.8	■■■□□ 2.84
KHSRP-213	ENST00000619396	SCFD2	Q8WU76	684 aa		32.8	■■■□□ 2.84
KHSRP-213	ENST00000619396	POLR3C	Q9BUI4	534 aa	Predicted RBP	32.8	■■■□□ 2.84
KHSRP-213	ENST00000619396	ANXA13	P27216	316 aa		32.79	■■■□□ 2.84
KHSRP-213	ENST00000619396	MAGEA9	P43362	315 aa		32.79	■■■□□ 2.84
KHSRP-213	ENST00000619396	GNGT1	P63211	74 aa		32.79	■■■□□ 2.84
KHSRP-213	ENST00000619396	CD302	Q8IX05	232 aa		32.79	■■■□□ 2.84
KHSRP-213	ENST00000619396	PBK	Q96KB5	322 aa		32.79	■■■□□ 2.84
KHSRP-213	ENST00000619396	WDR18	Q9BV38	432 aa		32.79	■■■□□ 2.84
KHSRP-213	ENST00000619396	BHMT2	Q9H2M3	363 aa		32.79	■■■□□ 2.84
KHSRP-213	ENST00000619396	RGL1	Q9NZL6	768 aa		32.79	■■■□□ 2.84
KHSRP-213	ENST00000619396	ATP8B3	O60423	1300 aa		32.79	■■■□□ 2.84
KHSRP-213	ENST00000619396	IGLV3-22	A0A075B6J6	115 aa		32.79	■■■□□ 2.84
KHSRP-213	ENST00000619396	KCNK3	O14649	394 aa		32.79	■■■□□ 2.84
KHSRP-213	ENST00000619396	KRT14	P02533	472 aa		32.79	■■■□□ 2.84
KHSRP-213	ENST00000619396	NBPF9	Q3BBW0	867 aa		32.79	■■■□□ 2.84
KHSRP-213	ENST00000619396	WHAMM	Q8TF30	809 aa		32.79	■■■□□ 2.84
KHSRP-213	ENST00000619396	PIK3CD	O00329	1044 aa		32.78	■■■□□ 2.84
KHSRP-213	ENST00000619396	RPL13	P26373	211 aa	Known RBP	32.78	■■■□□ 2.84
KHSRP-213	ENST00000619396	IFI16	Q16666	785 aa	Known RBP	32.78	■■■□□ 2.84
KHSRP-213	ENST00000619396	DCAF17	Q5H9S7	520 aa	Predicted RBP	32.78	■■■□□ 2.84
KHSRP-213	ENST00000619396	DNAAF5	Q86Y56	855 aa		32.78	■■■□□ 2.84
KHSRP-213	ENST00000619396	EYA4	O95677	639 aa		32.78	■■■□□ 2.84
KHSRP-213	ENST00000619396	ACTRT1	Q8TDG2	376 aa		32.78	■■■□□ 2.84
KHSRP-213	ENST00000619396	BORCS6	Q96GS4	357 aa		32.78	■■■□□ 2.84
KHSRP-213	ENST00000619396	GOLPH3	Q9H4A6	298 aa		32.78	■■■□□ 2.84
KHSRP-213	ENST00000619396	GUCY2F	P51841	1108 aa		32.77	■■■□□ 2.84
KHSRP-213	ENST00000619396	KCNA1	Q09470	495 aa		32.77	■■■□□ 2.84
KHSRP-213	ENST00000619396	TPCN2	Q8NHX9	752 aa		32.77	■■■□□ 2.84
KHSRP-213	ENST00000619396	EIF2AK1	Q9BQI3	630 aa	Known RBP	32.77	■■■□□ 2.84
KHSRP-213	ENST00000619396	CYP3A4	P08684	503 aa		32.77	■■■□□ 2.84
KHSRP-213	ENST00000619396	KLHL7	Q8IXQ5	586 aa		32.77	■■■□□ 2.84
KHSRP-213	ENST00000619396	SYNPO2	Q9UMS6	1093 aa		32.77	■■■□□ 2.84
KHSRP-213	ENST00000619396	ANKRD65	E5RJM6	399 aa		32.76	■■■□□ 2.83
KHSRP-213	ENST00000619396	TGFB1I1	O43294	461 aa		32.76	■■■□□ 2.83
KHSRP-213	ENST00000619396	NOP2	P46087	812 aa	Known RBP	32.76	■■■□□ 2.83
KHSRP-213	ENST00000619396	EIF1AD	Q8N9N8	165 aa	Known RBP	32.76	■■■□□ 2.83
KHSRP-213	ENST00000619396	VCPKMT	Q9H867	229 aa		32.76	■■■□□ 2.83
KHSRP-213	ENST00000619396	OLFML3	Q9NRN5	406 aa		32.76	■■■□□ 2.83
KHSRP-213	ENST00000619396	ZNRF3	Q9ULT6	936 aa		32.76	■■■□□ 2.83
KHSRP-213	ENST00000619396	GTPBP10	A4D1E9	387 aa	Known RBP	32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	BHMG1	C9JSJ3	638 aa	Predicted RBP	32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	FLOT1	O75955	427 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	GCNT3	O95395	438 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	POLD1	P28340	1107 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	CCT5	P48643	541 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	CXCL9	Q07325	125 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	EMC10	Q5UCC4	262 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	SLFN11	Q7Z7L1	901 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	SH2D3C	Q8N5H7	860 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	RANBP17	Q9H2T7	1088 aa	Known RBP	32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	RABGAP1	Q9Y3P9	1069 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396		A6NNZ2	444 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	CLIC2	O15247	247 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	CAP2	P40123	477 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	SKIDA1	Q1XH10	827 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	TUBB8	Q3ZCM7	444 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	TCERG1L	Q5VWI1	586 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	NIM1K	Q8IY84	436 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	BCAS4	Q8TDM0	211 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	ISCU	Q9H1K1	167 aa		32.75	■■■□□ 2.83
KHSRP-213	ENST00000619396	CHMP2A	O43633	222 aa		32.74	■■■□□ 2.83
KHSRP-213	ENST00000619396	TBCA	O75347	108 aa	Known RBP	32.74	■■■□□ 2.83
KHSRP-213	ENST00000619396	RINT1	Q6NUQ1	792 aa		32.74	■■■□□ 2.83
KHSRP-213	ENST00000619396	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.74	■■■□□ 2.83
KHSRP-213	ENST00000619396	STXBP5L	Q9Y2K9	1186 aa		32.74	■■■□□ 2.83
KHSRP-213	ENST00000619396	HSPA9	P38646	679 aa	Known RBP	32.74	■■■□□ 2.83
KHSRP-213	ENST00000619396	ERVK-9	P63128	1117 aa		32.74	■■■□□ 2.83
KHSRP-213	ENST00000619396	CTTN	Q14247	550 aa	Known RBP	32.74	■■■□□ 2.83
KHSRP-213	ENST00000619396	TTC19	Q6DKK2	380 aa	Predicted RBP	32.74	■■■□□ 2.83
KHSRP-213	ENST00000619396	GJB7	Q6PEY0	223 aa		32.74	■■■□□ 2.83
KHSRP-213	ENST00000619396	KCTD17	Q8N5Z5	321 aa		32.74	■■■□□ 2.83
KHSRP-213	ENST00000619396	C1orf131	Q8NDD1	294 aa	Known RBP	32.74	■■■□□ 2.83
KHSRP-213	ENST00000619396	GCNT4	Q9P109	453 aa		32.74	■■■□□ 2.83
KHSRP-213	ENST00000619396	PGAP2	Q9UHJ9	254 aa		32.74	■■■□□ 2.83
KHSRP-213	ENST00000619396		A0A0A6YYK5	440 aa	Predicted RBP	32.73	■■■□□ 2.83
KHSRP-213	ENST00000619396	DDX3X	O00571	662 aa	Known RBP eCLIP	32.73	■■■□□ 2.83	3e-20	■□□□□ 11.1
KHSRP-213	ENST00000619396	WNT10B	O00744	389 aa		32.73	■■■□□ 2.83
KHSRP-213	ENST00000619396	CEP104	O60308	925 aa		32.73	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms