RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 PPIL2Q13356 520 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 PDXDC1Q6P996 788 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 ERO1AQ96HE7 468 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 CCDC42Q96M95 316 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 DRC1Q96MC2 740 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 MKNK1Q9BUB5 465 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 NUCKS1Q9H1E3 243 aaKnown RBP20.9■□□□□ 0.94
PSPC1-206ENST00000619300 AGPAT3Q9NRZ7 376 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 DMAC2Q9NW81 257 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 GABBR1Q9UBS5 961 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 SLC9A2Q9UBY0 812 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 K7ENM7 598 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 DKC1O60832 514 aaKnown RBP eCLIP20.9■□□□□ 0.94
PSPC1-206ENST00000619300 NPEPPSP55786 919 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 HERVK_113P62684 666 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 RBM10P98175 930 aaKnown RBP20.9■□□□□ 0.94
PSPC1-206ENST00000619300 ZNF569Q5MCW4 686 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 ANO5Q75V66 913 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 OTUD6AQ7L8S5 288 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 TRMT1LQ7Z2T5 733 aaKnown RBP20.9■□□□□ 0.94
PSPC1-206ENST00000619300 SYCP3Q8IZU3 236 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 ATP6V0A1Q93050 837 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 ARHGAP20Q9P2F6 1191 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 AGTPBP1Q9UPW5 1226 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 OTOFQ9HC10 1997 aa20.89■□□□□ 0.94
PSPC1-206ENST00000619300 IPO7O95373 1038 aaKnown RBP20.89■□□□□ 0.93
PSPC1-206ENST00000619300 ICAM3P32942 547 aa20.89■□□□□ 0.93
PSPC1-206ENST00000619300 PLA2G4FQ68DD2 849 aa20.89■□□□□ 0.93
PSPC1-206ENST00000619300 ZNF662Q6ZS27 426 aa20.89■□□□□ 0.93
PSPC1-206ENST00000619300 NCAPG2Q86XI2 1143 aa20.89■□□□□ 0.93
PSPC1-206ENST00000619300 FAM186BQ8IYM0 893 aa20.89■□□□□ 0.93
PSPC1-206ENST00000619300 SYN2Q92777 582 aaPredicted RBP20.89■□□□□ 0.93
PSPC1-206ENST00000619300 HAUS4Q9H6D7 363 aa20.89■□□□□ 0.93
PSPC1-206ENST00000619300 MYO1AQ9UBC5 1043 aa20.89■□□□□ 0.93
PSPC1-206ENST00000619300 PTPRFP10586 1907 aa20.89■□□□□ 0.93
PSPC1-206ENST00000619300 ACTR2P61160 394 aa20.88■□□□□ 0.93
PSPC1-206ENST00000619300 DCAF17Q5H9S7 520 aaPredicted RBP20.88■□□□□ 0.93
PSPC1-206ENST00000619300 SWSAP1Q6NVH7 229 aa20.88■□□□□ 0.93
PSPC1-206ENST00000619300 ARMC9Q7Z3E5 817 aa20.88■□□□□ 0.93
PSPC1-206ENST00000619300 SLC9A9Q8IVB4 645 aa20.88■□□□□ 0.93
PSPC1-206ENST00000619300 SLC35C1Q96A29 364 aa20.88■□□□□ 0.93
PSPC1-206ENST00000619300 TAF1DQ9H5J8 278 aaPredicted RBP20.88■□□□□ 0.93
PSPC1-206ENST00000619300 TMEM206Q9H813 350 aa20.88■□□□□ 0.93
PSPC1-206ENST00000619300 NLRC4Q9NPP4 1024 aa20.88■□□□□ 0.93
PSPC1-206ENST00000619300 ZNF862O60290 1169 aa20.88■□□□□ 0.93
PSPC1-206ENST00000619300 PLEKP08567 350 aaPredicted RBP20.88■□□□□ 0.93
PSPC1-206ENST00000619300 ALDH5A1P51649 535 aaPredicted RBP20.88■□□□□ 0.93
PSPC1-206ENST00000619300 POLR2FP61218 127 aaKnown RBP20.88■□□□□ 0.93
PSPC1-206ENST00000619300 SP2Q02086 613 aa20.88■□□□□ 0.93
PSPC1-206ENST00000619300 FSTL1Q12841 308 aa20.88■□□□□ 0.93
PSPC1-206ENST00000619300 MYBPC2Q14324 1141 aa20.88■□□□□ 0.93
PSPC1-206ENST00000619300 EAPPQ56P03 285 aaPredicted RBP20.88■□□□□ 0.93
PSPC1-206ENST00000619300 ABHD15Q6UXT9 468 aa20.88■□□□□ 0.93
PSPC1-206ENST00000619300 OPTNQ96CV9 577 aa20.88■□□□□ 0.93
PSPC1-206ENST00000619300 PAGR1Q9BTK6 254 aa20.88■□□□□ 0.93
PSPC1-206ENST00000619300 ST6GALNAC4Q9H4F1 302 aa20.88■□□□□ 0.93
PSPC1-206ENST00000619300 PLCB1Q9NQ66 1216 aa20.88■□□□□ 0.93
PSPC1-206ENST00000619300 POTEB2H3BUK9 544 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 CNMDO75829 334 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 STBD1O95210 358 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 NCBP1Q09161 790 aaKnown RBP20.87■□□□□ 0.93
PSPC1-206ENST00000619300 TCERG1LQ5VWI1 586 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 ZNF710Q8N1W2 664 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 ACCSQ96QU6 501 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 GPRC5CQ9NQ84 441 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 FRMD4BQ9Y2L6 1034 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 TELO2Q9Y4R8 837 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 ZC3H4Q9UPT8 1303 aaKnown RBP20.87■□□□□ 0.93
PSPC1-206ENST00000619300 EIF4A3P38919 411 aaKnown RBP20.87■□□□□ 0.93
PSPC1-206ENST00000619300 GTF2BQ00403 316 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 MOGSQ13724 837 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 NAA30Q147X3 362 aaPredicted RBP20.87■□□□□ 0.93
PSPC1-206ENST00000619300 SPA17Q15506 151 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 EXOC3L4Q17RC7 722 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 FAM102BQ5T8I3 360 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 MIS18BP1Q6P0N0 1132 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 FASTKD5Q7L8L6 764 aaKnown RBP20.87■□□□□ 0.93
PSPC1-206ENST00000619300 KIAA1328Q86T90 577 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 SLC17A8Q8NDX2 589 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 GANQ9H2C0 597 aa20.87■□□□□ 0.93
PSPC1-206ENST00000619300 IQCA1LA6NCM1 817 aa20.86■□□□□ 0.93
PSPC1-206ENST00000619300 CYP2J2P51589 502 aa20.86■□□□□ 0.93
PSPC1-206ENST00000619300 APBA1Q02410 837 aa20.86■□□□□ 0.93
PSPC1-206ENST00000619300 SP4Q02446 784 aa20.86■□□□□ 0.93
PSPC1-206ENST00000619300 GPR162Q16538 588 aa20.86■□□□□ 0.93
PSPC1-206ENST00000619300 SFMBT2Q5VUG0 894 aa20.86■□□□□ 0.93
PSPC1-206ENST00000619300 DPY19L2P1Q6NXN4 242 aa20.86■□□□□ 0.93
PSPC1-206ENST00000619300 HAUS6Q7Z4H7 955 aa20.86■□□□□ 0.93
PSPC1-206ENST00000619300 TMEM174Q8WUU8 243 aa20.86■□□□□ 0.93
PSPC1-206ENST00000619300 ANKRD7Q92527 254 aa20.86■□□□□ 0.93
PSPC1-206ENST00000619300 CEP170P1Q96L14 293 aa20.86■□□□□ 0.93
PSPC1-206ENST00000619300 GUCA1BQ9UMX6 200 aa20.86■□□□□ 0.93
PSPC1-206ENST00000619300 LOC285556D6RIA3 1793 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 SOWAHBA6NEL2 793 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 SLC25A27O95847 323 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 SLC9A1P19634 815 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 EDNRBP24530 442 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 PON1P27169 355 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 PEX3P56589 373 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 CCDC122Q5T0U0 273 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms