RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 STAT5BP51692 787 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 JAK3P52333 1124 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 EPHB4P54760 987 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 NPEPPSP55786 919 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 PRKCEQ02156 737 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 CYP4A11Q02928 519 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 CEBPZQ03701 1054 aaKnown RBP5.87□□□□□ -1.47
SHMT1-211ENST00000618902 PPFIA1Q13136 1202 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 IKBKEQ14164 716 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 CTTNQ14247 550 aaKnown RBP5.87□□□□□ -1.47
SHMT1-211ENST00000618902 DHX8Q14562 1220 aaKnown RBP5.87□□□□□ -1.47
SHMT1-211ENST00000618902 SF3A1Q15459 793 aaKnown RBP5.87□□□□□ -1.47
SHMT1-211ENST00000618902 TARBP2Q15633 366 aaKnown RBP5.87□□□□□ -1.47
SHMT1-211ENST00000618902 GRIK4Q16099 956 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 RILPL1Q5EBL4 403 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 FAM47CQ5HY64 1035 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 FAM26DQ5JW98 314 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 TMEM240Q5SV17 173 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 ZNF697Q5TEC3 545 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 IER5Q5VY09 327 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 CAVIN1Q6NZI2 390 aaKnown RBP5.87□□□□□ -1.47
SHMT1-211ENST00000618902 PDXDC2PQ6P474 469 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 CNKSR3Q6P9H4 555 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 USP49Q70CQ1 688 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 TRMT1LQ7Z2T5 733 aaKnown RBP5.87□□□□□ -1.47
SHMT1-211ENST00000618902 SLFN12Q8IYM2 578 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 IGSF22Q8N9C0 903 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 ATP8B4Q8TF62 1192 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 LMBR1Q8WVP7 490 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 GLG1Q92896 1179 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 CLIC6Q96NY7 704 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 EIF2AK1Q9BQI3 630 aaKnown RBP5.87□□□□□ -1.47
SHMT1-211ENST00000618902 SH2D3AQ9BRG2 576 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 FTHL17Q9BXU8 183 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 WNT8AQ9H1J5 351 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 PDCL3Q9H2J4 239 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 RNF39Q9H2S5 420 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 TSPY26PQ9H489 355 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 TTC12Q9H892 705 aaPredicted RBP5.87□□□□□ -1.47
SHMT1-211ENST00000618902 RRAGDQ9NQL2 400 aaPredicted RBP5.87□□□□□ -1.47
SHMT1-211ENST00000618902 ZNF302Q9NR11 478 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 MSRAQ9UJ68 235 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 FBXO2Q9UK22 296 aaPredicted RBP5.87□□□□□ -1.47
SHMT1-211ENST00000618902 PCDHA12Q9UN75 941 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 STXBP5LQ9Y2K9 1186 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 PCDHA11Q9Y5I1 949 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 SLC4A7Q9Y6M7 1214 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 LTBP2Q14767 1821 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 TCHHQ07283 1943 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 KDM3AQ9Y4C1 1321 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 POTEB3A0JP26 581 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 GOLGA6L6A8MZA4 724 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 GAS2O43903 313 aaKnown RBP5.86□□□□□ -1.47
SHMT1-211ENST00000618902 HBP1O60381 514 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 C22orf31O95567 290 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 OATP04181 439 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 P4HBP07237 508 aaKnown RBP5.86□□□□□ -1.47
SHMT1-211ENST00000618902 PSAPP07602 524 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 CKBP12277 381 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 CSF2RAP15509 400 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 POU3F3P20264 500 aaPredicted RBP5.86□□□□□ -1.47
SHMT1-211ENST00000618902 TMOD1P28289 359 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 MARCKSP29966 332 aaPredicted RBP5.86□□□□□ -1.47
SHMT1-211ENST00000618902 PRPHP41219 470 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 IGBP1P78318 339 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 DNM1Q05193 864 aaKnown RBP5.86□□□□□ -1.47
SHMT1-211ENST00000618902 DRP2Q13474 957 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 MBTPS1Q14703 1052 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 SLC39A14Q15043 492 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 PCBP1Q15365 356 aaKnown RBP eCLIP5.86□□□□□ -1.47
SHMT1-211ENST00000618902 SHHQ15465 462 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 TCTN1Q2MV58 587 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 ZNF484Q5JVG2 852 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 SPECC1Q5M775 1068 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 AXDND1Q5T1B0 1012 aaPredicted RBP5.86□□□□□ -1.47
SHMT1-211ENST00000618902 CCDC183Q5T5S1 534 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 PLA2G4FQ68DD2 849 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 POTEBQ6S5H4 581 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 ANO5Q75V66 913 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 LRRC8DQ7L1W4 858 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 C16orf59Q7L2K0 433 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 KCNK18Q7Z418 384 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 CATSPER3Q86XQ3 398 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 LINC01465Q8N7H1 131 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 LINC00301Q8NCQ3 95 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 ATP6V0A1Q93050 837 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 SAMD11Q96NU1 681 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 PNMA5Q96PV4 448 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 LXNQ9BS40 222 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 SCAND2PQ9GZW5 306 aaPredicted RBP5.86□□□□□ -1.47
SHMT1-211ENST00000618902 ZSCAN16Q9H4T2 348 aaPredicted RBP5.86□□□□□ -1.47
SHMT1-211ENST00000618902 NRBP2Q9NSY0 501 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 LMCD1Q9NZU5 365 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 USP25Q9UHP3 1055 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 RWDD3Q9Y3V2 267 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 PCDHA2Q9Y5H9 948 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 SCN5AQ14524 2016 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 MYH15Q9Y2K3 1946 aa5.86□□□□□ -1.47
SHMT1-211ENST00000618902 A0A087X0B3 334 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 IGKV6-21A0A0C4DH24 114 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms