RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 TTI1O43156 1089 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 ELOA2Q8IYF1 753 aaPredicted RBP9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 BANK1Q8NDB2 785 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 EDEM3Q9BZQ6 932 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 RNF146Q9NTX7 359 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 SPAG17Q6Q759 2223 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 LRRC53A6NM62 1247 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 SMARCA1P28370 1054 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 QARSP47897 775 aaKnown RBP9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 FRMD5Q7Z6J6 570 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 SLC44A5Q8NCS7 719 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 HEXIM2Q96MH2 286 aaKnown RBP9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 KIF2CQ99661 725 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 DONSONQ9NYP3 566 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 LRFN2Q9ULH4 789 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 IPO5O00410 1097 aaKnown RBP9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 TTLL4Q14679 1199 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 EXOC4Q96A65 974 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 Q9H521 79 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 PFASO15067 1338 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 POTEB3A0JP26 581 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 POTECB2RU33 542 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 TJP3O95049 919 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 NTSR2O95665 410 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 FGGP02679 453 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 PSMA2P25787 234 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 PRCPP42785 496 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 DARS2Q6PI48 645 aaKnown RBP9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 POTEBQ6S5H4 581 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 TRIM72Q6ZMU5 477 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 ZBTB33Q86T24 672 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 POLR3FQ9H1D9 316 aaPredicted RBP9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 TXLNGQ9NUQ3 528 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 ZHX2Q9Y6X8 837 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 MSH2P43246 934 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 CACNB3P54284 484 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 TKFCQ3LXA3 575 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 INTS9Q9NV88 658 aaKnown RBP9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 AFG3L2Q9Y4W6 797 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 IFRD2Q12894 506 aaPredicted RBP9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 ZNF699Q32M78 642 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 SLC10A4Q96EP9 437 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 WRNIP1Q96S55 665 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 DNAJC12Q9UKB3 198 aa9.81□□□□□ -0.84
SPTBN1-207ENST00000615901 ACTN1P12814 892 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 ECE1P42892 770 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 RPS6KA2Q15349 733 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 NAA35Q5VZE5 725 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 TRIM56Q9BRZ2 755 aaKnown RBP9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 VCX3AQ9NNX9 186 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 DAGLAQ9Y4D2 1042 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 PODXLO00592 558 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 TBX3O15119 743 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 PLTPP55058 493 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 PDE1BQ01064 536 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 RPUSD2Q8IZ73 545 aaKnown RBP9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 CCSER1Q9C0I3 900 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 MID2Q9UJV3 735 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 ARHGAP23Q9P227 1491 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 ZWINTO95229 277 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 LUC7L3O95232 432 aaKnown RBP9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 P4HBP07237 508 aaKnown RBP9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 C16orf86Q6ZW13 317 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 ZMYND12Q9H0C1 365 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 ATP8A1Q9Y2Q0 1164 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 SYNJ2BP-COX16A0A087WUM0 186 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 CNPY4Q8N129 248 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 TBC1D16Q8TBP0 767 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 PIGOQ8TEQ8 1089 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 COX16Q9P0S2 106 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 CLNS1AP54105 237 aaKnown RBP9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 GTF3C2Q8WUA4 911 aaPredicted RBP9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 EXOC1LA0A1B0GW35 172 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 POTEFA5A3E0 1075 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 RASGRF2O14827 1237 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 GSTA1P08263 222 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 GSTA2P09210 222 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 POTEIP0CG38 1075 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 POTEGQ6S5H5 508 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 POTEEQ6S8J3 1075 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 LRRC4Q9HBW1 653 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 HIP1RO75146 1068 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 KRT3P12035 628 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 CYP27A1Q02318 531 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 CENPUQ71F23 418 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 EFCAB13Q8IY85 973 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 SRRM1Q8IYB3 904 aaKnown RBP9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 PDIK1LQ8N165 341 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 BCAS4Q8TDM0 211 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 TTC25Q96NG3 672 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 NXF1Q9UBU9 619 aaKnown RBP9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 MEGF6O75095 1541 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 FMN2Q9NZ56 1722 aa9.8□□□□□ -0.84
SPTBN1-207ENST00000615901 CLCN6P51797 869 aa9.79□□□□□ -0.84
SPTBN1-207ENST00000615901 MAPK6Q16659 721 aa9.79□□□□□ -0.84
SPTBN1-207ENST00000615901 CEP55Q53EZ4 464 aa9.79□□□□□ -0.84
SPTBN1-207ENST00000615901 PARD6BQ9BYG5 372 aa9.79□□□□□ -0.84
SPTBN1-207ENST00000615901 JPH1Q9HDC5 661 aaPredicted RBP9.79□□□□□ -0.84
SPTBN1-207ENST00000615901 MTMR4Q9NYA4 1195 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms