RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 WDR81Q562E7 1941 aa16.33■□□□□ 0.2
CD48-203ENST00000613788 ARVCFO00192 962 aa16.33■□□□□ 0.2
CD48-203ENST00000613788 GUCY2CP25092 1073 aa16.33■□□□□ 0.2
CD48-203ENST00000613788 TMOD1P28289 359 aa16.33■□□□□ 0.2
CD48-203ENST00000613788 HOXC8P31273 242 aa16.33■□□□□ 0.2
CD48-203ENST00000613788 DNM2P50570 870 aa16.33■□□□□ 0.2
CD48-203ENST00000613788 ARSHQ5FYA8 562 aa16.33■□□□□ 0.2
CD48-203ENST00000613788 MTHFD1LQ6UB35 978 aa16.33■□□□□ 0.2
CD48-203ENST00000613788 NECAB2Q7Z6G3 386 aa16.33■□□□□ 0.2
CD48-203ENST00000613788 DDX12PQ92771 950 aa16.33■□□□□ 0.2
CD48-203ENST00000613788 MTRQ99707 1265 aa16.33■□□□□ 0.2
CD48-203ENST00000613788 RUSC1Q9BVN2 902 aa16.33■□□□□ 0.2
CD48-203ENST00000613788 PDLIM7Q9NR12 457 aa16.33■□□□□ 0.2
CD48-203ENST00000613788 TUBE1Q9UJT0 475 aa16.33■□□□□ 0.2
CD48-203ENST00000613788 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.32■□□□□ 0.2
CD48-203ENST00000613788 MYMKA6NI61 221 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 GTPBP6O43824 516 aaPredicted RBP16.32■□□□□ 0.2
CD48-203ENST00000613788 COL6A1P12109 1028 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 ADAM17P78536 824 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 EMC2Q15006 297 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 POSTNQ15063 836 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 MARCH8Q5T0T0 291 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 EFCAB12Q6NXP0 572 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 CNNM4Q6P4Q7 775 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 DYMQ7RTS9 669 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 METTL13Q8N6R0 699 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 PPP1R13LQ8WUF5 828 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 TCP11Q8WWU5 503 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 SYAP1Q96A49 352 aaPredicted RBP16.32■□□□□ 0.2
CD48-203ENST00000613788 ABHD8Q96I13 439 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 PAWRQ96IZ0 340 aaKnown RBP16.32■□□□□ 0.2
CD48-203ENST00000613788 TRIM9Q9C026 710 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 NUP62CLQ9H1M0 184 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 CLSTN2Q9H4D0 955 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 C11orf49Q9H6J7 331 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 SUGCTQ9HAC7 445 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 ODF2LQ9ULJ1 636 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 PCDHA2Q9Y5H9 948 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 SCN10AQ9Y5Y9 1956 aa16.32■□□□□ 0.2
CD48-203ENST00000613788 IGKV6-21A0A0C4DH24 114 aa16.31■□□□□ 0.2
CD48-203ENST00000613788 MBLAC1A4D2B0 266 aaPredicted RBP16.31■□□□□ 0.2
CD48-203ENST00000613788 TRAK2O60296 914 aa16.31■□□□□ 0.2
CD48-203ENST00000613788 C22orf31O95567 290 aa16.31■□□□□ 0.2
CD48-203ENST00000613788 EN2P19622 333 aaPredicted RBP16.31■□□□□ 0.2
CD48-203ENST00000613788 CDK7P50613 346 aa16.31■□□□□ 0.2
CD48-203ENST00000613788 MDM2Q00987 491 aaPredicted RBP16.31■□□□□ 0.2
CD48-203ENST00000613788 IER5Q5VY09 327 aa16.31■□□□□ 0.2
CD48-203ENST00000613788 GDF6Q6KF10 455 aaPredicted RBP16.31■□□□□ 0.2
CD48-203ENST00000613788 SLC39A5Q6ZMH5 540 aa16.31■□□□□ 0.2
CD48-203ENST00000613788 GRAMD1CQ8IYS0 662 aa16.31■□□□□ 0.2
CD48-203ENST00000613788 KIFAP3Q92845 792 aa16.31■□□□□ 0.2
CD48-203ENST00000613788 MROH7Q68CQ1 1323 aa16.31■□□□□ 0.2
CD48-203ENST00000613788 SMIM35A0A1B0GVV1 85 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 TREHO43280 583 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 SMC2O95347 1197 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 RAD51AP2Q09MP3 1159 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 CUL4BQ13620 913 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 GIT2Q14161 759 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 CAMK4Q16566 473 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 PTGISQ16647 500 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 FAM102BQ5T8I3 360 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 C1orf53Q5VUE5 145 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 MAEAQ7L5Y9 396 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 DIS3LQ8TF46 1054 aaKnown RBP16.3■□□□□ 0.2
CD48-203ENST00000613788 DRC1Q96MC2 740 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 BLZF1Q9H2G9 400 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 XPNPEP1Q9NQW7 623 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 KCNG1Q9UIX4 513 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 NOD1Q9Y239 953 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 LOXHD1Q8IVV2 1947 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 BRCA2P51587 3418 aa16.3■□□□□ 0.2
CD48-203ENST00000613788 NPHP3-ACAD11A0A0J9YXS1 232 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 PVALEFA0A1B0GWK0 134 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 HIP1RO75146 1068 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 TBCAO75347 108 aaKnown RBP16.29■□□□□ 0.2
CD48-203ENST00000613788 RPLP2P05387 115 aaKnown RBP16.29■□□□□ 0.2
CD48-203ENST00000613788 CYP2C9P11712 490 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 IDEP14735 1019 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 ASIC1P78348 528 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 ZNF200P98182 395 aaPredicted RBP16.29■□□□□ 0.2
CD48-203ENST00000613788 DPYDQ12882 1025 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 HIC1Q14526 733 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 CCDC183Q5T5S1 534 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 TAF2Q6P1X5 1199 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 CCDC65Q8IXS2 484 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 LRRC71Q8N4P6 559 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 CCDC47Q96A33 483 aaKnown RBP16.29■□□□□ 0.2
CD48-203ENST00000613788 DNAJC19Q96DA6 116 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 MAP7D2Q96T17 732 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 REEP2Q9BRK0 252 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 SUCLA2Q9P2R7 463 aaPredicted RBP16.29■□□□□ 0.2
CD48-203ENST00000613788 COL4A3BPQ9Y5P4 624 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 TLR3O15455 904 aaKnown RBP16.29■□□□□ 0.2
CD48-203ENST00000613788 ASAP2O43150 1006 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 FAM13AO94988 1023 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 ATN1P54259 1190 aaPredicted RBP16.29■□□□□ 0.2
CD48-203ENST00000613788 CDC42EP1Q00587 391 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 PNOCQ13519 176 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 MXD4Q14582 209 aaPredicted RBP16.29■□□□□ 0.2
CD48-203ENST00000613788 CAVIN1Q6NZI2 390 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms