RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 SREBF1P36956 1147 aa26.69■■□□□ 1.86
MMP28-203ENST00000612672 TECP42680 631 aa26.69■■□□□ 1.86
MMP28-203ENST00000612672 CLK2P49760 499 aaKnown RBP26.69■■□□□ 1.86
MMP28-203ENST00000612672 CREB3L3Q68CJ9 461 aa26.69■■□□□ 1.86
MMP28-203ENST00000612672 TMEM184AQ6ZMB5 413 aa26.69■■□□□ 1.86
MMP28-203ENST00000612672 SGMS1Q86VZ5 419 aa26.69■■□□□ 1.86
MMP28-203ENST00000612672 TNPO1Q92973 898 aaKnown RBP26.69■■□□□ 1.86
MMP28-203ENST00000612672 CDCA3Q99618 268 aaPredicted RBP26.69■■□□□ 1.86
MMP28-203ENST00000612672 AAASQ9NRG9 546 aa26.69■■□□□ 1.86
MMP28-203ENST00000612672 COL1A2P08123 1366 aa26.69■■□□□ 1.86
MMP28-203ENST00000612672 SLC26A2P50443 739 aa26.68■■□□□ 1.86
MMP28-203ENST00000612672 PKN1Q16512 942 aa26.68■■□□□ 1.86
MMP28-203ENST00000612672 MRPS27Q92552 414 aaKnown RBP26.68■■□□□ 1.86
MMP28-203ENST00000612672 CASD1Q96PB1 797 aa26.68■■□□□ 1.86
MMP28-203ENST00000612672 ZNF302Q9NR11 478 aa26.68■■□□□ 1.86
MMP28-203ENST00000612672 TMEM161AQ9NX61 479 aa26.68■■□□□ 1.86
MMP28-203ENST00000612672 IGLV3-22A0A075B6J6 115 aa26.67■■□□□ 1.86
MMP28-203ENST00000612672 AVPR2P30518 371 aa26.67■■□□□ 1.86
MMP28-203ENST00000612672 ADCY7P51828 1080 aa26.67■■□□□ 1.86
MMP28-203ENST00000612672 NECTIN1Q15223 517 aa26.67■■□□□ 1.86
MMP28-203ENST00000612672 PDXDC2PQ6P474 469 aa26.67■■□□□ 1.86
MMP28-203ENST00000612672 APOA5Q6Q788 366 aa26.67■■□□□ 1.86
MMP28-203ENST00000612672 TCEANC2Q96MN5 208 aa26.67■■□□□ 1.86
MMP28-203ENST00000612672 TCF25Q9BQ70 676 aa26.67■■□□□ 1.86
MMP28-203ENST00000612672 SMOC2Q9H3U7 446 aa26.67■■□□□ 1.86
MMP28-203ENST00000612672 ATP6V0A4Q9HBG4 840 aa26.67■■□□□ 1.86
MMP28-203ENST00000612672 LAG3P18627 525 aa26.66■■□□□ 1.86
MMP28-203ENST00000612672 CRYBB1P53674 252 aaPredicted RBP26.66■■□□□ 1.86
MMP28-203ENST00000612672 PLCB3Q01970 1234 aa26.66■■□□□ 1.86
MMP28-203ENST00000612672 ZNF484Q5JVG2 852 aa26.66■■□□□ 1.86
MMP28-203ENST00000612672 FAM160B1Q5W0V3 765 aa26.66■■□□□ 1.86
MMP28-203ENST00000612672 SWSAP1Q6NVH7 229 aa26.66■■□□□ 1.86
MMP28-203ENST00000612672 PPP1R18Q6NYC8 613 aa26.66■■□□□ 1.86
MMP28-203ENST00000612672 RASGRP4Q8TDF6 673 aa26.66■■□□□ 1.86
MMP28-203ENST00000612672 CRYGNQ8WXF5 182 aa26.66■■□□□ 1.86
MMP28-203ENST00000612672 YTHDC1Q96MU7 727 aaKnown RBP26.66■■□□□ 1.86
MMP28-203ENST00000612672 BRPF3Q9ULD4 1205 aa26.66■■□□□ 1.86
MMP28-203ENST00000612672 LZTS1Q9Y250 596 aa26.66■■□□□ 1.86
MMP28-203ENST00000612672 GPR182O15218 404 aa26.65■■□□□ 1.86
MMP28-203ENST00000612672 ST18O60284 1047 aa26.65■■□□□ 1.86
MMP28-203ENST00000612672 CLCN3P51790 818 aa26.65■■□□□ 1.86
MMP28-203ENST00000612672 TRMT1LQ7Z2T5 733 aaKnown RBP26.65■■□□□ 1.86
MMP28-203ENST00000612672 PRRX2Q99811 253 aa26.65■■□□□ 1.86
MMP28-203ENST00000612672 ENTPD7Q9NQZ7 604 aa26.65■■□□□ 1.86
MMP28-203ENST00000612672 SMCO2A6NFE2 343 aa26.64■■□□□ 1.86
MMP28-203ENST00000612672 GFRA3O60609 400 aa26.64■■□□□ 1.86
MMP28-203ENST00000612672 FOSP01100 380 aaPredicted RBP26.64■■□□□ 1.86
MMP28-203ENST00000612672 PDE12Q6L8Q7 609 aaKnown RBP26.64■■□□□ 1.86
MMP28-203ENST00000612672 KCNT2Q6UVM3 1135 aa26.64■■□□□ 1.86
MMP28-203ENST00000612672 NIPA1Q7RTP0 329 aa26.64■■□□□ 1.86
MMP28-203ENST00000612672 PLA2G4DQ86XP0 818 aa26.64■■□□□ 1.86
MMP28-203ENST00000612672 LINC01465Q8N7H1 131 aa26.64■■□□□ 1.86
MMP28-203ENST00000612672 FEZF2Q8TBJ5 459 aa26.64■■□□□ 1.86
MMP28-203ENST00000612672 ZNF668Q96K58 619 aaPredicted RBP26.64■■□□□ 1.86
MMP28-203ENST00000612672 TMEM117Q9H0C3 514 aa26.64■■□□□ 1.86
MMP28-203ENST00000612672 ELAC1Q9H777 363 aaKnown RBP26.64■■□□□ 1.86
MMP28-203ENST00000612672 FAM217BQ9NTX9 383 aaPredicted RBP26.64■■□□□ 1.86
MMP28-203ENST00000612672 V9GY48 417 aaPredicted RBP26.64■■□□□ 1.86
MMP28-203ENST00000612672 DENND4AQ7Z401 1863 aa26.64■■□□□ 1.85
MMP28-203ENST00000612672 CLLU1OSQ5K130 101 aa26.63■■□□□ 1.85
MMP28-203ENST00000612672 JAKMIP3Q5VZ66 844 aa26.63■■□□□ 1.85
MMP28-203ENST00000612672 ESYT1Q9BSJ8 1104 aa26.63■■□□□ 1.85
MMP28-203ENST00000612672 POMKQ9H5K3 350 aa26.63■■□□□ 1.85
MMP28-203ENST00000612672 BARHL2Q9NY43 387 aa26.63■■□□□ 1.85
MMP28-203ENST00000612672 MAFBQ9Y5Q3 323 aaPredicted RBP26.63■■□□□ 1.85
MMP28-203ENST00000612672 AP3B2Q13367 1082 aa26.62■■□□□ 1.85
MMP28-203ENST00000612672 METTL13Q8N6R0 699 aa26.62■■□□□ 1.85
MMP28-203ENST00000612672 ADAMTS10Q9H324 1103 aa26.62■■□□□ 1.85
MMP28-203ENST00000612672 RIF1Q5UIP0 2472 aaKnown RBP26.62■■□□□ 1.85
MMP28-203ENST00000612672 FSD2A1L4K1 749 aa26.61■■□□□ 1.85
MMP28-203ENST00000612672 C2CD4DB7Z1M9 353 aa26.61■■□□□ 1.85
MMP28-203ENST00000612672 H0Y858 1186 aa26.61■■□□□ 1.85
MMP28-203ENST00000612672 IPO5O00410 1097 aaKnown RBP26.61■■□□□ 1.85
MMP28-203ENST00000612672 CDC27P30260 824 aa26.61■■□□□ 1.85
MMP28-203ENST00000612672 ZNF76P36508 570 aa26.61■■□□□ 1.85
MMP28-203ENST00000612672 RTN1Q16799 776 aa26.61■■□□□ 1.85
MMP28-203ENST00000612672 MIS18BP1Q6P0N0 1132 aa26.61■■□□□ 1.85
MMP28-203ENST00000612672 KREMEN2Q8NCW0 462 aa26.61■■□□□ 1.85
MMP28-203ENST00000612672 RIPOR3Q96MK2 946 aa26.61■■□□□ 1.85
MMP28-203ENST00000612672 TSHZ2Q9NRE2 1034 aa26.61■■□□□ 1.85
MMP28-203ENST00000612672 HCFC2Q9Y5Z7 792 aa26.61■■□□□ 1.85
MMP28-203ENST00000612672 BRD1O95696 1058 aa26.6■■□□□ 1.85
MMP28-203ENST00000612672 WEE2P0C1S8 567 aa26.6■■□□□ 1.85
MMP28-203ENST00000612672 ECHDC2Q86YB7 292 aa26.6■■□□□ 1.85
MMP28-203ENST00000612672 LRRC43Q8N309 656 aa26.6■■□□□ 1.85
MMP28-203ENST00000612672 LRRC71Q8N4P6 559 aa26.6■■□□□ 1.85
MMP28-203ENST00000612672 BBXQ8WY36 941 aaPredicted RBP26.6■■□□□ 1.85
MMP28-203ENST00000612672 ATOH1Q92858 354 aaPredicted RBP26.6■■□□□ 1.85
MMP28-203ENST00000612672 ZNF558Q96NG5 402 aa26.6■■□□□ 1.85
MMP28-203ENST00000612672 RBM28Q9NW13 759 aaKnown RBP26.6■■□□□ 1.85
MMP28-203ENST00000612672 FGFR4P22455 802 aa26.59■■□□□ 1.85
MMP28-203ENST00000612672 NLRP11P59045 1033 aaKnown RBP26.59■■□□□ 1.85
MMP28-203ENST00000612672 EXOSC10Q01780 885 aaKnown RBP26.59■■□□□ 1.85
MMP28-203ENST00000612672 ODR4Q5SWX8 454 aa26.59■■□□□ 1.85
MMP28-203ENST00000612672 KANK3Q6NY19 840 aa26.59■■□□□ 1.85
MMP28-203ENST00000612672 CKAP2LQ8IYA6 745 aa26.59■■□□□ 1.85
MMP28-203ENST00000612672 SLC39A11Q8N1S5 342 aa26.59■■□□□ 1.85
MMP28-203ENST00000612672 NGRNQ9NPE2 291 aaKnown RBP26.59■■□□□ 1.85
MMP28-203ENST00000612672 PTPRZ1P23471 2315 aaPredicted RBP26.59■■□□□ 1.85
MMP28-203ENST00000612672 C2orf71A6NGG8 1288 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms