RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 TUT1Q9H6E5 874 aaKnown RBP19.43■□□□□ 0.7
SREK1-216ENST00000612404 GRPEL1Q9HAV7 217 aa19.43■□□□□ 0.7
SREK1-216ENST00000612404 ATP6V0A4Q9HBG4 840 aa19.43■□□□□ 0.7
SREK1-216ENST00000612404 GPRC5CQ9NQ84 441 aa19.43■□□□□ 0.7
SREK1-216ENST00000612404 BECN2A8MW95 431 aa19.43■□□□□ 0.7
SREK1-216ENST00000612404 GRK4P32298 578 aa19.43■□□□□ 0.7
SREK1-216ENST00000612404 CHMP4BP1P59074 171 aa19.43■□□□□ 0.7
SREK1-216ENST00000612404 FSCN1Q16658 493 aaKnown RBP19.43■□□□□ 0.7
SREK1-216ENST00000612404 L1TD1Q5T7N2 865 aaKnown RBP19.43■□□□□ 0.7
SREK1-216ENST00000612404 BPIFA3Q9BQP9 254 aa19.43■□□□□ 0.7
SREK1-216ENST00000612404 TIPINQ9BVW5 301 aa19.43■□□□□ 0.7
SREK1-216ENST00000612404 HBP1O60381 514 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 INHAP05111 366 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 MYL3P08590 195 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 MAPK7Q13164 816 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 LRRC41Q15345 812 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 TARBP2Q15633 366 aaKnown RBP19.42■□□□□ 0.7
SREK1-216ENST00000612404 ODR4Q5SWX8 454 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 MAP3K21Q5TCX8 1036 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 DAW1Q8N136 415 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 MCPH1Q8NEM0 835 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 SLC7A3Q8WY07 619 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 DRC1Q96MC2 740 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 MRPL44Q9H9J2 332 aaKnown RBP19.42■□□□□ 0.7
SREK1-216ENST00000612404 SPC25Q9HBM1 224 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 CTNND2Q9UQB3 1225 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 MYH11P35749 1972 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 SYNRGQ9UMZ2 1314 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 PGK1P00558 417 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 EMC2Q15006 297 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 IQCB1Q15051 598 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 ADSSL1Q8N142 457 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 GLIS3Q8NEA6 775 aa19.42■□□□□ 0.7
SREK1-216ENST00000612404 RFC5P40937 340 aa19.41■□□□□ 0.7
SREK1-216ENST00000612404 ZNF131P52739 623 aa19.41■□□□□ 0.7
SREK1-216ENST00000612404 SOX10P56693 466 aa19.41■□□□□ 0.7
SREK1-216ENST00000612404 GJA9P57773 515 aa19.41■□□□□ 0.7
SREK1-216ENST00000612404 TBC1D8BQ0IIM8 1120 aa19.41■□□□□ 0.7
SREK1-216ENST00000612404 GNASQ5JWF2 1037 aa19.41■□□□□ 0.7
SREK1-216ENST00000612404 DHX40Q8IX18 779 aaKnown RBP19.41■□□□□ 0.7
SREK1-216ENST00000612404 FGFBP2Q9BYJ0 223 aa19.41■□□□□ 0.7
SREK1-216ENST00000612404 XPNPEP3Q9NQH7 507 aa19.41■□□□□ 0.7
SREK1-216ENST00000612404 PCDHA2Q9Y5H9 948 aa19.41■□□□□ 0.7
SREK1-216ENST00000612404 GOLGA6L19H0YKK7 550 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 MYCNP04198 464 aaPredicted RBP19.4■□□□□ 0.7
SREK1-216ENST00000612404 ERCC5P28715 1186 aaPredicted RBP19.4■□□□□ 0.7
SREK1-216ENST00000612404 STX17P56962 302 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 IGBP1P78318 339 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 TRAPPC12Q8WVT3 735 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 CEP89Q96ST8 783 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 DHX33Q9H6R0 707 aaKnown RBP19.4■□□□□ 0.7
SREK1-216ENST00000612404 XPNPEP1Q9NQW7 623 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 PDLIM7Q9NR12 457 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 LARSQ9P2J5 1176 aaKnown RBP19.4■□□□□ 0.7
SREK1-216ENST00000612404 BRCA2P51587 3418 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 MYADML2A6NDP7 307 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 ZBTB42B2RXF5 422 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 PSMA7O14818 248 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 INSRRP14616 1297 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 PAK1Q13153 545 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 CT47A1Q5JQC4 288 aaPredicted RBP19.4■□□□□ 0.7
SREK1-216ENST00000612404 FAM178BQ8IXR5 827 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 NELFBQ8WX92 580 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 KIFAP3Q92845 792 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 OLFML3Q9NRN5 406 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 SEL1LQ9UBV2 794 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 PPME1Q9Y570 386 aa19.4■□□□□ 0.7
SREK1-216ENST00000612404 DNAH12Q6ZR08 3092 aa19.39■□□□□ 0.7
SREK1-216ENST00000612404 SMTNL1A8MU46 457 aa19.39■□□□□ 0.69
SREK1-216ENST00000612404 GCNT3O95395 438 aa19.39■□□□□ 0.69
SREK1-216ENST00000612404 PLS3P13797 630 aa19.39■□□□□ 0.69
SREK1-216ENST00000612404 MRE11P49959 708 aa19.39■□□□□ 0.69
SREK1-216ENST00000612404 MYOCDQ8IZQ8 938 aa19.39■□□□□ 0.69
SREK1-216ENST00000612404 SH3TC2Q8TF17 1288 aa19.39■□□□□ 0.69
SREK1-216ENST00000612404 TMEM143Q96AN5 459 aa19.39■□□□□ 0.69
SREK1-216ENST00000612404 MAFO75444 373 aaPredicted RBP19.39■□□□□ 0.69
SREK1-216ENST00000612404 F2P00734 622 aa19.39■□□□□ 0.69
SREK1-216ENST00000612404 NMT1P30419 496 aaKnown RBP19.39■□□□□ 0.69
SREK1-216ENST00000612404 PPP1R2P41236 205 aa19.39■□□□□ 0.69
SREK1-216ENST00000612404 CASP5P51878 434 aa19.39■□□□□ 0.69
SREK1-216ENST00000612404 MYL5Q02045 173 aa19.39■□□□□ 0.69
SREK1-216ENST00000612404 KIAA0753Q2KHM9 967 aa19.39■□□□□ 0.69
SREK1-216ENST00000612404 ZNF484Q5JVG2 852 aa19.39■□□□□ 0.69
SREK1-216ENST00000612404 POLR3FQ9H1D9 316 aaPredicted RBP19.39■□□□□ 0.69
SREK1-216ENST00000612404 UPF3AQ9H1J1 476 aaKnown RBP19.39■□□□□ 0.69
SREK1-216ENST00000612404 DDX20Q9UHI6 824 aaKnown RBP19.39■□□□□ 0.69
SREK1-216ENST00000612404 PTPN22Q9Y2R2 807 aa19.39■□□□□ 0.69
SREK1-216ENST00000612404 MYBP10242 640 aa19.38■□□□□ 0.69
SREK1-216ENST00000612404 PEX3P56589 373 aa19.38■□□□□ 0.69
SREK1-216ENST00000612404 PPFIA1Q13136 1202 aa19.38■□□□□ 0.69
SREK1-216ENST00000612404 COBLL1Q53SF7 1204 aa19.38■□□□□ 0.69
SREK1-216ENST00000612404 GUF1Q8N442 669 aaKnown RBP19.38■□□□□ 0.69
SREK1-216ENST00000612404 KAT2BQ92831 832 aa19.38■□□□□ 0.69
SREK1-216ENST00000612404 DHTKD1Q96HY7 919 aaPredicted RBP19.38■□□□□ 0.69
SREK1-216ENST00000612404 SUGCTQ9HAC7 445 aa19.38■□□□□ 0.69
SREK1-216ENST00000612404 HMX1Q9NP08 348 aaPredicted RBP19.38■□□□□ 0.69
SREK1-216ENST00000612404 RWDD2AQ9UIY3 292 aa19.38■□□□□ 0.69
SREK1-216ENST00000612404 IKBKBO14920 756 aa19.37■□□□□ 0.69
SREK1-216ENST00000612404 MFSD10Q14728 455 aa19.37■□□□□ 0.69
SREK1-216ENST00000612404 EXOC8Q8IYI6 725 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms