RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 KANSL2Q9H9L4 492 aa24.29■■□□□ 1.48
SHANK2-220ENST00000608988 ZDHHC18Q9NUE0 388 aa24.29■■□□□ 1.48
SHANK2-220ENST00000608988 CEP83Q9Y592 693 aa24.29■■□□□ 1.48
SHANK2-220ENST00000608988 MYO3BQ8WXR4 1341 aa24.29■■□□□ 1.48
SHANK2-220ENST00000608988 FOCADQ5VW36 1801 aa24.29■■□□□ 1.48
SHANK2-220ENST00000608988 ARFGEF1Q9Y6D6 1849 aa24.29■■□□□ 1.48
SHANK2-220ENST00000608988 POTEB3A0JP26 581 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 CFAP73A6NFT4 308 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 POTECB2RU33 542 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 DDX3YO15523 660 aaKnown RBP24.28■■□□□ 1.48
SHANK2-220ENST00000608988 DR1Q01658 176 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 PPATQ06203 517 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 RIPK1Q13546 671 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 GIT2Q14161 759 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 NFIL3Q16649 462 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 UBE2SQ16763 222 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 MSL1Q68DK7 614 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 POTEBQ6S5H4 581 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 PIGWQ7Z7B1 504 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 COL23A1Q86Y22 540 aaPredicted RBP24.28■■□□□ 1.48
SHANK2-220ENST00000608988 MARCH10Q8NA82 808 aaPredicted RBP24.28■■□□□ 1.48
SHANK2-220ENST00000608988 LINC00116Q8NCU8 138 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 U2AF1L4Q8WU68 220 aaKnown RBP24.28■■□□□ 1.48
SHANK2-220ENST00000608988 GOLPH3Q9H4A6 298 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 PARP2Q9UGN5 583 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 CTNND1O60716 968 aaKnown RBP24.28■■□□□ 1.48
SHANK2-220ENST00000608988 AGTP01019 485 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 FGGP02679 453 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 GALCP54803 685 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 GRIK5Q16478 980 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 SPATA31A1Q5TZJ5 1347 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 DENND2CQ68D51 928 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 BTNL9Q6UXG8 535 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 CRELD2Q6UXH1 353 aaPredicted RBP24.28■■□□□ 1.48
SHANK2-220ENST00000608988 ADGRF4Q8IZF3 695 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 NSRP1Q9H0G5 558 aaKnown RBP24.28■■□□□ 1.48
SHANK2-220ENST00000608988 PSTPIP2Q9H939 334 aa24.28■■□□□ 1.48
SHANK2-220ENST00000608988 GAKO14976 1311 aa24.27■■□□□ 1.48
SHANK2-220ENST00000608988 NPHP3-ACAD11A0A0J9YXS1 232 aa24.27■■□□□ 1.48
SHANK2-220ENST00000608988 PHF20L1A8MW92 1017 aa24.27■■□□□ 1.48
SHANK2-220ENST00000608988 TBX3O15119 743 aa24.27■■□□□ 1.48
SHANK2-220ENST00000608988 PMS2P54278 862 aa24.27■■□□□ 1.48
SHANK2-220ENST00000608988 ADCY2Q08462 1091 aa24.27■■□□□ 1.48
SHANK2-220ENST00000608988 C6orf118Q5T5N4 469 aa24.27■■□□□ 1.48
SHANK2-220ENST00000608988 FAM228AQ86W67 206 aa24.27■■□□□ 1.48
SHANK2-220ENST00000608988 TEX2Q8IWB9 1127 aa24.27■■□□□ 1.48
SHANK2-220ENST00000608988 SYT2Q8N9I0 419 aaPredicted RBP24.27■■□□□ 1.48
SHANK2-220ENST00000608988 DPH5Q9H2P9 285 aa24.27■■□□□ 1.48
SHANK2-220ENST00000608988 ANKIB1Q9P2G1 1089 aa24.27■■□□□ 1.48
SHANK2-220ENST00000608988 ATP8A1Q9Y2Q0 1164 aa24.27■■□□□ 1.48
SHANK2-220ENST00000608988 ZBTB5O15062 677 aa24.26■■□□□ 1.47
SHANK2-220ENST00000608988 NR3C1P04150 777 aa24.26■■□□□ 1.47
SHANK2-220ENST00000608988 RHBDL3P58872 404 aa24.26■■□□□ 1.47
SHANK2-220ENST00000608988 SPRED3Q2MJR0 410 aa24.26■■□□□ 1.47
SHANK2-220ENST00000608988 CCHCR1Q8TD31 782 aa24.26■■□□□ 1.47
SHANK2-220ENST00000608988 SLC35C1Q96A29 364 aa24.26■■□□□ 1.47
SHANK2-220ENST00000608988 GCNT4Q9P109 453 aa24.26■■□□□ 1.47
SHANK2-220ENST00000608988 SLC12A4Q9UP95 1085 aa24.26■■□□□ 1.47
SHANK2-220ENST00000608988 DCDC2CA8MYV0 355 aa24.26■■□□□ 1.47
SHANK2-220ENST00000608988 SOX5P35711 763 aa24.26■■□□□ 1.47
SHANK2-220ENST00000608988 HADHBP55084 474 aaKnown RBP24.26■■□□□ 1.47
SHANK2-220ENST00000608988 GRAPQ13588 217 aa24.26■■□□□ 1.47
SHANK2-220ENST00000608988 PLS1Q14651 629 aa24.26■■□□□ 1.47
SHANK2-220ENST00000608988 RC3H1Q5TC82 1133 aaKnown RBP24.26■■□□□ 1.47
SHANK2-220ENST00000608988 GRAPLQ8TC17 118 aaPredicted RBP24.26■■□□□ 1.47
SHANK2-220ENST00000608988 ATXN2LQ8WWM7 1075 aaKnown RBP24.26■■□□□ 1.47
SHANK2-220ENST00000608988 CTNNBL1Q8WYA6 563 aaPredicted RBP24.26■■□□□ 1.47
SHANK2-220ENST00000608988 STK33Q9BYT3 514 aa24.26■■□□□ 1.47
SHANK2-220ENST00000608988 CELF4Q9BZC1 486 aaKnown RBP24.26■■□□□ 1.47
SHANK2-220ENST00000608988 BUB1BO60566 1050 aaPredicted RBP24.25■■□□□ 1.47
SHANK2-220ENST00000608988 PPP1R11O60927 126 aaPredicted RBP24.25■■□□□ 1.47
SHANK2-220ENST00000608988 CAND2O75155 1236 aa24.25■■□□□ 1.47
SHANK2-220ENST00000608988 TTLL1O95922 423 aa24.25■■□□□ 1.47
SHANK2-220ENST00000608988 MMEP08473 750 aa24.25■■□□□ 1.47
SHANK2-220ENST00000608988 ELF3P78545 371 aaPredicted RBP24.25■■□□□ 1.47
SHANK2-220ENST00000608988 KLRC3Q07444 240 aa24.25■■□□□ 1.47
SHANK2-220ENST00000608988 TCEAL1Q15170 157 aa24.25■■□□□ 1.47
SHANK2-220ENST00000608988 GPCPD1Q9NPB8 672 aa24.25■■□□□ 1.47
SHANK2-220ENST00000608988 DNM3Q9UQ16 869 aa24.25■■□□□ 1.47
SHANK2-220ENST00000608988 MED24O75448 989 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 AKAP3O75969 853 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 GGPS1O95749 300 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 CRYMQ14894 314 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 DCAF17Q5H9S7 520 aaPredicted RBP24.24■■□□□ 1.47
SHANK2-220ENST00000608988 KIAA1755Q5JYT7 1200 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 AEBP2Q6ZN18 517 aaPredicted RBP24.24■■□□□ 1.47
SHANK2-220ENST00000608988 N4BP2L2Q92802 583 aaPredicted RBP24.24■■□□□ 1.47
SHANK2-220ENST00000608988 RUNDC3BQ96NL0 473 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 TRIM51Q9BSJ1 452 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 EPB41L4BQ9H329 900 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 SAMD15Q9P1V8 674 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 PNMA2Q9UL42 364 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 SUFUQ9UMX1 484 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 MIF4GDA9UHW6 222 aaKnown RBP24.24■■□□□ 1.47
SHANK2-220ENST00000608988 PPP1R12BO60237 982 aaPredicted RBP24.24■■□□□ 1.47
SHANK2-220ENST00000608988 CHN1P15882 459 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 GAP43P17677 238 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 RPA1P27694 616 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 HOXD13P35453 343 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 CASP5P51878 434 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms