RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 CDKL5O76039 1030 aa16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 MMP1P03956 469 aa16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 IBSPP21815 317 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 ODR4Q5SWX8 454 aa16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 EFCAB12Q6NXP0 572 aa16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 MOXD1Q6UVY6 613 aa16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 FAM43BQ6ZT52 329 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 LRRC71Q8N4P6 559 aa16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 ETNPPLQ8TBG4 499 aa16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 NEK9Q8TD19 979 aa16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 PABPC5Q96DU9 382 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 MBOAT7Q96N66 472 aa16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 SLKQ9H2G2 1235 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 RGS18Q9NS28 235 aa16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 TPCN1Q9ULQ1 816 aa16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 KCNJ14Q9UNX9 436 aa16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 FNDC1Q4ZHG4 1894 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 H3BQ06 376 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 CSPG5O95196 566 aa16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 NONOQ15233 471 aaKnown RBP eCLIP16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 INF2Q27J81 1249 aa16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 B3GNT9Q6UX72 402 aa16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 KRT25Q7Z3Z0 450 aa16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 RDM1Q8NG50 284 aa16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 P2RX5Q93086 422 aa16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 MAP7D2Q96T17 732 aa16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 PHF20Q9BVI0 1012 aa16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 ALG13Q9NP73 1137 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 C1orf112Q9NSG2 853 aa16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 NRBP2Q9NSY0 501 aa16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 PLAGL2Q9UPG8 496 aa16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 AKT3Q9Y243 479 aa16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 PCDHB7Q9Y5E2 793 aa16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 STK36Q9NRP7 1315 aa16.95■□□□□ 0.3
SHKBP1-226ENST00000600791 C9IYK1 514 aa16.94■□□□□ 0.3
SHKBP1-226ENST00000600791 SLC37A4O43826 429 aa16.94■□□□□ 0.3
SHKBP1-226ENST00000600791 PFKFB2O60825 505 aa16.94■□□□□ 0.3
SHKBP1-226ENST00000600791 DTNBO60941 627 aa16.94■□□□□ 0.3
SHKBP1-226ENST00000600791 IL9P15248 144 aa16.94■□□□□ 0.3
SHKBP1-226ENST00000600791 TMOD1P28289 359 aa16.94■□□□□ 0.3
SHKBP1-226ENST00000600791 NLRP11P59045 1033 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-226ENST00000600791 ANAPC15P60006 121 aa16.94■□□□□ 0.3
SHKBP1-226ENST00000600791 CAMK1Q14012 370 aa16.94■□□□□ 0.3
SHKBP1-226ENST00000600791 PTCRAQ6ISU1 281 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-226ENST00000600791 SLC24A5Q71RS6 500 aa16.94■□□□□ 0.3
SHKBP1-226ENST00000600791 MIER3Q7Z3K6 550 aa16.94■□□□□ 0.3
SHKBP1-226ENST00000600791 ADAMTS10Q9H324 1103 aa16.94■□□□□ 0.3
SHKBP1-226ENST00000600791 DDX25Q9UHL0 483 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-226ENST00000600791 PLXNA4Q9HCM2 1894 aa16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 ITGB1P05556 798 aa16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 DNAJB1P25685 340 aa16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 AK2P54819 239 aa16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 HYAL1Q12794 435 aa16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 DSC3Q14574 896 aa16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 TARBP2Q15633 366 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 NAALADL2Q58DX5 795 aa16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 FAM102BQ5T8I3 360 aa16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 EP400NLQ6ZTU2 488 aa16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 KLHL23Q8NBE8 558 aa16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 ZNF668Q96K58 619 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 CD320Q9NPF0 282 aa16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 GJB4Q9NTQ9 266 aa16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 RNF216Q9NWF9 866 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 CLDND1Q9NY35 253 aa16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 SEPT9Q9UHD8 586 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 C5orf42Q9H799 3197 aa16.93■□□□□ 0.3
SHKBP1-226ENST00000600791 CCDC194A0A1B0GVG4 234 aa16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 TMEM150BA6NC51 233 aa16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 GRXCR2A6NFK2 248 aa16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 STBD1O95210 358 aa16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 CTDNEP1O95476 244 aa16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 XBP1P17861 261 aa16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 EIF4BP23588 611 aaKnown RBP16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 GPC3P51654 580 aa16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 TBC1D8BQ0IIM8 1120 aa16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 CTC1Q2NKJ3 1217 aa16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 LETM2Q2VYF4 491 aa16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 XKR3Q5GH77 459 aa16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 ZNF710Q8N1W2 664 aa16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 SPPL3Q8TCT6 385 aa16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 KHSRPQ92945 711 aaKnown RBP eCLIP16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 CEP89Q96ST8 783 aa16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 TMEM161AQ9NX61 479 aa16.92■□□□□ 0.3
SHKBP1-226ENST00000600791 TBKBP1A7MCY6 615 aa16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 NCK2O43639 380 aa16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 FGFR1P11362 822 aa16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 LTBRP36941 435 aa16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 FAM189BP81408 668 aa16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 DRP2Q13474 957 aa16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 ANKRD1Q15327 319 aa16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 PUS10Q3MIT2 529 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 MTERF2Q49AM1 385 aa16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 ERICH6BQ5W0A0 696 aa16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 NEK8Q86SG6 692 aa16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 FAM178BQ8IXR5 827 aa16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 OXER1Q8TDS5 423 aa16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 SH2D3AQ9BRG2 576 aa16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 NIFKQ9BYG3 293 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 ELAC1Q9H777 363 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms