RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 LOC730098B7Z3J9 87 aa24■■□□□ 1.43
PNKP-212ENST00000599454 MAGEB2O15479 319 aa24■■□□□ 1.43
PNKP-212ENST00000599454 PPFIA3O75145 1194 aa24■■□□□ 1.43
PNKP-212ENST00000599454 FGF18O76093 207 aa24■■□□□ 1.43
PNKP-212ENST00000599454 PSAPP07602 524 aa24■■□□□ 1.43
PNKP-212ENST00000599454 FAM189BP81408 668 aa24■■□□□ 1.43
PNKP-212ENST00000599454 ADCK5Q3MIX3 580 aa24■■□□□ 1.43
PNKP-212ENST00000599454 FAM102BQ5T8I3 360 aa24■■□□□ 1.43
PNKP-212ENST00000599454 FAM228AQ86W67 206 aa24■■□□□ 1.43
PNKP-212ENST00000599454 RASEFQ8IZ41 740 aa24■■□□□ 1.43
PNKP-212ENST00000599454 FBXL18Q96ME1 805 aa24■■□□□ 1.43
PNKP-212ENST00000599454 OSMRQ99650 979 aa24■■□□□ 1.43
PNKP-212ENST00000599454 C6orf50Q9HD87 102 aa24■■□□□ 1.43
PNKP-212ENST00000599454 ZDBF2Q9HCK1 2354 aa23.99■■□□□ 1.43
PNKP-212ENST00000599454 LAG3P18627 525 aa23.99■■□□□ 1.43
PNKP-212ENST00000599454 METAP2P50579 478 aaKnown RBP eCLIP23.99■■□□□ 1.43
PNKP-212ENST00000599454 FGD1P98174 961 aa23.99■■□□□ 1.43
PNKP-212ENST00000599454 NHLH1Q02575 133 aa23.99■■□□□ 1.43
PNKP-212ENST00000599454 CBX2Q14781 532 aaPredicted RBP23.99■■□□□ 1.43
PNKP-212ENST00000599454 KIZQ2M2Z5 673 aa23.99■■□□□ 1.43
PNKP-212ENST00000599454 BMP8AQ7Z5Y6 402 aa23.99■■□□□ 1.43
PNKP-212ENST00000599454 THNSL1Q8IYQ7 743 aa23.99■■□□□ 1.43
PNKP-212ENST00000599454 REXO1Q8N1G1 1221 aaKnown RBP23.99■■□□□ 1.43
PNKP-212ENST00000599454 METTL13Q8N6R0 699 aa23.99■■□□□ 1.43
PNKP-212ENST00000599454 COLGALT1Q8NBJ5 622 aa23.99■■□□□ 1.43
PNKP-212ENST00000599454 FAM167AQ96KS9 214 aa23.99■■□□□ 1.43
PNKP-212ENST00000599454 BARX2Q9UMQ3 279 aaPredicted RBP23.99■■□□□ 1.43
PNKP-212ENST00000599454 LZTS1Q9Y250 596 aa23.99■■□□□ 1.43
PNKP-212ENST00000599454 USP15Q9Y4E8 981 aaPredicted RBP23.99■■□□□ 1.43
PNKP-212ENST00000599454 PCDHA10Q9Y5I2 948 aa23.99■■□□□ 1.43
PNKP-212ENST00000599454 HOXA2O43364 376 aa23.98■■□□□ 1.43
PNKP-212ENST00000599454 GPR32O75388 356 aa23.98■■□□□ 1.43
PNKP-212ENST00000599454 SRGAP2BP0DMP2 458 aa23.98■■□□□ 1.43
PNKP-212ENST00000599454 ATF7P17544 494 aaPredicted RBP23.98■■□□□ 1.43
PNKP-212ENST00000599454 GNA11P29992 359 aa23.98■■□□□ 1.43
PNKP-212ENST00000599454 ADD1P35611 737 aaKnown RBP23.98■■□□□ 1.43
PNKP-212ENST00000599454 DSC3Q14574 896 aa23.98■■□□□ 1.43
PNKP-212ENST00000599454 PKN1Q16512 942 aa23.98■■□□□ 1.43
PNKP-212ENST00000599454 DUSP6Q16828 381 aa23.98■■□□□ 1.43
PNKP-212ENST00000599454 PHF7Q9BWX1 381 aaPredicted RBP23.98■■□□□ 1.43
PNKP-212ENST00000599454 TYW1Q9NV66 732 aaKnown RBP23.98■■□□□ 1.43
PNKP-212ENST00000599454 NAP1L2Q9ULW6 460 aaPredicted RBP23.98■■□□□ 1.43
PNKP-212ENST00000599454 PCDHGC5Q9Y5F6 944 aa23.98■■□□□ 1.43
PNKP-212ENST00000599454 TRIOO75962 3097 aa23.97■■□□□ 1.43
PNKP-212ENST00000599454 FSCN2O14926 492 aa23.97■■□□□ 1.43
PNKP-212ENST00000599454 CIITAP33076 1130 aa23.97■■□□□ 1.43
PNKP-212ENST00000599454 MAP7D2Q96T17 732 aa23.97■■□□□ 1.43
PNKP-212ENST00000599454 TMEM117Q9H0C3 514 aa23.97■■□□□ 1.43
PNKP-212ENST00000599454 CWH43Q9H720 699 aa23.97■■□□□ 1.43
PNKP-212ENST00000599454 NID2Q14112 1375 aa23.96■■□□□ 1.43
PNKP-212ENST00000599454 VTNP04004 478 aa23.96■■□□□ 1.43
PNKP-212ENST00000599454 TMOD1P28289 359 aa23.96■■□□□ 1.43
PNKP-212ENST00000599454 ERVFC1P60507 584 aa23.96■■□□□ 1.43
PNKP-212ENST00000599454 PLCB3Q01970 1234 aa23.96■■□□□ 1.43
PNKP-212ENST00000599454 TMEM184AQ6ZMB5 413 aa23.96■■□□□ 1.43
PNKP-212ENST00000599454 TRIM67Q6ZTA4 783 aa23.96■■□□□ 1.43
PNKP-212ENST00000599454 BICD2Q8TD16 824 aa23.96■■□□□ 1.43
PNKP-212ENST00000599454 PPP1R16BQ96T49 567 aa23.96■■□□□ 1.43
PNKP-212ENST00000599454 GABBR1Q9UBS5 961 aa23.96■■□□□ 1.43
PNKP-212ENST00000599454 PUF60Q9UHX1 559 aaKnown RBP23.96■■□□□ 1.43
PNKP-212ENST00000599454 WDR64B1ANS9 1081 aa23.95■■□□□ 1.42
PNKP-212ENST00000599454 PER2O15055 1255 aa23.95■■□□□ 1.42
PNKP-212ENST00000599454 PRPF3O43395 683 aaKnown RBP23.95■■□□□ 1.42
PNKP-212ENST00000599454 CDC45O75419 566 aa23.95■■□□□ 1.42
PNKP-212ENST00000599454 FGFR1P11362 822 aa23.95■■□□□ 1.42
PNKP-212ENST00000599454 MRE11P49959 708 aa23.95■■□□□ 1.42
PNKP-212ENST00000599454 PRR16Q569H4 304 aa23.95■■□□□ 1.42
PNKP-212ENST00000599454 RASGRP4Q8TDF6 673 aa23.95■■□□□ 1.42
PNKP-212ENST00000599454 SUSD6Q92537 303 aa23.95■■□□□ 1.42
PNKP-212ENST00000599454 MRPS27Q92552 414 aaKnown RBP23.95■■□□□ 1.42
PNKP-212ENST00000599454 SAMM50Q9Y512 469 aa23.95■■□□□ 1.42
PNKP-212ENST00000599454 KMT2EQ8IZD2 1858 aa23.94■■□□□ 1.42
PNKP-212ENST00000599454 TMEM221A6NGB7 291 aa23.94■■□□□ 1.42
PNKP-212ENST00000599454 M0R296 226 aa23.94■■□□□ 1.42
PNKP-212ENST00000599454 ZSCAN20P17040 1043 aaPredicted RBP23.94■■□□□ 1.42
PNKP-212ENST00000599454 PPM1AP35813 382 aa23.94■■□□□ 1.42
PNKP-212ENST00000599454 ZXDAP98168 799 aa23.94■■□□□ 1.42
PNKP-212ENST00000599454 EFCAB12Q6NXP0 572 aa23.94■■□□□ 1.42
PNKP-212ENST00000599454 LRRC43Q8N309 656 aa23.94■■□□□ 1.42
PNKP-212ENST00000599454 LINC01465Q8N7H1 131 aa23.94■■□□□ 1.42
PNKP-212ENST00000599454 CCDC148Q8NFR7 591 aa23.94■■□□□ 1.42
PNKP-212ENST00000599454 NGRNQ9NPE2 291 aaKnown RBP23.94■■□□□ 1.42
PNKP-212ENST00000599454 AKT3Q9Y243 479 aa23.94■■□□□ 1.42
PNKP-212ENST00000599454 EIF4BP23588 611 aaKnown RBP23.93■■□□□ 1.42
PNKP-212ENST00000599454 CLCN3P51790 818 aa23.93■■□□□ 1.42
PNKP-212ENST00000599454 NLRP11P59045 1033 aaKnown RBP23.93■■□□□ 1.42
PNKP-212ENST00000599454 AKAP17AQ02040 695 aaKnown RBP23.93■■□□□ 1.42
PNKP-212ENST00000599454 APOBRQ0VD83 1088 aa23.93■■□□□ 1.42
PNKP-212ENST00000599454 ABI1Q8IZP0 508 aa23.93■■□□□ 1.42
PNKP-212ENST00000599454 VN1R2Q8NFZ6 395 aa23.93■■□□□ 1.42
PNKP-212ENST00000599454 KCNB2Q92953 911 aa23.93■■□□□ 1.42
PNKP-212ENST00000599454 PRRX2Q99811 253 aa23.93■■□□□ 1.42
PNKP-212ENST00000599454 ADAMTS10Q9H324 1103 aa23.93■■□□□ 1.42
PNKP-212ENST00000599454 NRBP2Q9NSY0 501 aa23.93■■□□□ 1.42
PNKP-212ENST00000599454 HCSTQ9UBK5 93 aa23.93■■□□□ 1.42
PNKP-212ENST00000599454 MYO10Q9HD67 2058 aa23.93■■□□□ 1.42
PNKP-212ENST00000599454 OATP04181 439 aa23.92■■□□□ 1.42
PNKP-212ENST00000599454 KCNC3Q14003 757 aa23.92■■□□□ 1.42
PNKP-212ENST00000599454 Q6ZUG5 572 aa23.92■■□□□ 1.42
PNKP-212ENST00000599454 CENPQQ7L2Z9 268 aaPredicted RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms