RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, human

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRAMD1A-209	ENST00000598580	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.52	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	PCDHB7	Q9Y5E2	793 aa		12.52	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	COL1A2	P08123	1366 aa		12.52	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	LOXHD1	Q8IVV2	1947 aa		12.52	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	KIAA1671	Q9BY89	1806 aa		12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	LOC730098	B7Z3J9	87 aa		12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	MSH4	O15457	936 aa		12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	CDC45	O75419	566 aa		12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	STBD1	O95210	358 aa		12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	HSPA4	P34932	840 aa		12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	PBX3	P40426	434 aa		12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	KCNC3	Q14003	757 aa		12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	HERC4	Q5GLZ8	1057 aa	Predicted RBP	12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	ZNF746	Q6NUN9	644 aa	Predicted RBP	12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	COLGALT1	Q8NBJ5	622 aa		12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	BBX	Q8WY36	941 aa	Predicted RBP	12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	TNPO1	Q92973	898 aa	Known RBP	12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	FBXL18	Q96ME1	805 aa		12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	JAKMIP1	Q96N16	626 aa	Known RBP	12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	CASD1	Q96PB1	797 aa		12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	CEP89	Q96ST8	783 aa		12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	AGXT2	Q9BYV1	514 aa		12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	NCOA5	Q9HCD5	579 aa	Known RBP	12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	LRFN2	Q9ULH4	789 aa		12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	USP15	Q9Y4E8	981 aa	Predicted RBP	12.51	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	TMEM150B	A6NC51	233 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	CSDE1	O75534	798 aa	Known RBP	12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	FGF18	O76093	207 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	FGFR4	P22455	802 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	NDUFV1	P49821	464 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	DRP2	Q13474	957 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	KRT32	Q14532	448 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	ALYREF	Q86V81	257 aa	Known RBP	12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	REXO1	Q8N1G1	1221 aa	Known RBP	12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	FBXL16	Q8N461	479 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	LRRC71	Q8N4P6	559 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	METTL13	Q8N6R0	699 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	GLT8D2	Q9H1C3	349 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	TLE6	Q9H808	572 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	C6orf50	Q9HD87	102 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	C1orf112	Q9NSG2	853 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	TBC1D22B	Q9NU19	505 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	VPS54	Q9P1Q0	977 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	CDH22	Q9UJ99	828 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	FAM50B	Q9Y247	325 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	PCDHA10	Q9Y5I2	948 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	NID2	Q14112	1375 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	EVPL	Q92817	2033 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	CACNA1H	O95180	2353 aa		12.5	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	DENND3	A2RUS2	1198 aa		12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	HIDE1	A8MVS5	230 aa		12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	GPR182	O15218	404 aa		12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	DTNB	O60941	627 aa		12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	RPS6KB1	P23443	525 aa		12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	PDIA3	P30101	505 aa	Known RBP	12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	EVC	P57679	992 aa		12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	NLRP11	P59045	1033 aa	Known RBP	12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	CCT2	P78371	535 aa	Known RBP	12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	CBX2	Q14781	532 aa	Predicted RBP	12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	TARBP2	Q15633	366 aa	Known RBP	12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	NPY5R	Q15761	445 aa		12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	DUSP6	Q16828	381 aa		12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	CLLU1OS	Q5K130	101 aa		12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	EFCAB12	Q6NXP0	572 aa		12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	CKAP2L	Q8IYA6	745 aa		12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	FEZF2	Q8TBJ5	459 aa		12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	SUSD6	Q92537	303 aa		12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	SH2D3A	Q9BRG2	576 aa		12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	LARP6	Q9BRS8	491 aa	Known RBP	12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	S1PR5	Q9H228	398 aa		12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	TMEM161A	Q9NX61	479 aa		12.49	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	PLXNA4	Q9HCM2	1894 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580		M0R2N6	131 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	PSAP	P07602	524 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	HMGB1	P09429	215 aa	Known RBP	12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	ATF7	P17544	494 aa	Predicted RBP	12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	NHLH1	Q02575	133 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	TOB2	Q14106	344 aa	Predicted RBP	12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	IER5L	Q5T953	404 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	SYCE2	Q6PIF2	218 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	B3GNT9	Q6UX72	402 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	ZNF598	Q86UK7	904 aa	Known RBP	12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	ECHDC2	Q86YB7	292 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	SMAP1	Q8IYB5	467 aa	Predicted RBP	12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	MICAL1	Q8TDZ2	1067 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	EDA	Q92838	391 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	SLC5A5	Q92911	643 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	CCDC136	Q96JN2	1154 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	AIFM3	Q96NN9	605 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	PHOX2B	Q99453	314 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	UNC45A	Q9H3U1	944 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	ELAC1	Q9H777	363 aa	Known RBP	12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	ATP6V0A4	Q9HBG4	840 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	TLR9	Q9NR96	1032 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	DISC1	Q9NRI5	854 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	PCDHB12	Q9Y5F1	795 aa		12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	12.48	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	CCDC196	A0A1B0GTZ2	297 aa		12.47	□□□□□ -0.41
GRAMD1A-209	ENST00000598580	PSMD10	O75832	226 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms