RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 FAM86B1E9PN63 330 aa14.2□□□□□ -0.14
TRIM28-212ENST00000597995 DDX39AO00148 427 aaKnown RBP14.2□□□□□ -0.14
TRIM28-212ENST00000597995 IPO5O00410 1097 aaKnown RBP14.2□□□□□ -0.14
TRIM28-212ENST00000597995 FAM86B2P0C5J1 330 aa14.2□□□□□ -0.14
TRIM28-212ENST00000597995 ATP4AP20648 1035 aa14.2□□□□□ -0.14
TRIM28-212ENST00000597995 DUSP6Q16828 381 aa14.2□□□□□ -0.14
TRIM28-212ENST00000597995 FAM102BQ5T8I3 360 aa14.2□□□□□ -0.14
TRIM28-212ENST00000597995 TMEM184AQ6ZMB5 413 aa14.2□□□□□ -0.14
TRIM28-212ENST00000597995 ZNF710Q8N1W2 664 aa14.2□□□□□ -0.14
TRIM28-212ENST00000597995 COLGALT1Q8NBJ5 622 aa14.2□□□□□ -0.14
TRIM28-212ENST00000597995 SUSD6Q92537 303 aa14.2□□□□□ -0.14
TRIM28-212ENST00000597995 PRRX2Q99811 253 aa14.2□□□□□ -0.14
TRIM28-212ENST00000597995 ATP6V0A4Q9HBG4 840 aa14.2□□□□□ -0.14
TRIM28-212ENST00000597995 TBC1D22BQ9NU19 505 aa14.2□□□□□ -0.14
TRIM28-212ENST00000597995 TYW1Q9NV66 732 aaKnown RBP14.2□□□□□ -0.14
TRIM28-212ENST00000597995 PCDHGC5Q9Y5F6 944 aa14.2□□□□□ -0.14
TRIM28-212ENST00000597995 MAFBQ9Y5Q3 323 aaPredicted RBP14.2□□□□□ -0.14
TRIM28-212ENST00000597995 PLXNA4Q9HCM2 1894 aa14.2□□□□□ -0.14
TRIM28-212ENST00000597995 ESYT2A0FGR8 921 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 TMEM221A6NGB7 291 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 GOLGA8AA7E2F4 631 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 GOLGA8BA8MQT2 603 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 M0R296 226 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 FSCN2O14926 492 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 PER2O15055 1255 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 GPR32O75388 356 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 C22orf31O95567 290 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 HMGB1P09429 215 aaKnown RBP14.19□□□□□ -0.14
TRIM28-212ENST00000597995 LAG3P18627 525 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 ADD1P35611 737 aaKnown RBP14.19□□□□□ -0.14
TRIM28-212ENST00000597995 ERVFC1P60507 584 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 ZXDAP98168 799 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 SETQ01105 290 aaPredicted RBP14.19□□□□□ -0.14
TRIM28-212ENST00000597995 PLCB3Q01970 1234 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 APOBRQ0VD83 1088 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 DSC3Q14574 896 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 KIZQ2M2Z5 673 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 ZNF746Q6NUN9 644 aaPredicted RBP14.19□□□□□ -0.14
TRIM28-212ENST00000597995 Q6ZUG5 572 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 FAM228AQ86W67 206 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 CKAP2LQ8IYA6 745 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 SMAP1Q8IYB5 467 aaPredicted RBP14.19□□□□□ -0.14
TRIM28-212ENST00000597995 THNSL1Q8IYQ7 743 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 RASGRP4Q8TDF6 673 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 PBXIP1Q96AQ6 731 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 ZNF577Q9BSK1 485 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 CWH43Q9H720 699 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 PPP4R2Q9NY27 417 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 PUF60Q9UHX1 559 aaKnown RBP14.19□□□□□ -0.14
TRIM28-212ENST00000597995 CEP131Q9UPN4 1083 aa14.19□□□□□ -0.14
TRIM28-212ENST00000597995 MAGEB2O15479 319 aa14.18□□□□□ -0.14
TRIM28-212ENST00000597995 HOXA2O43364 376 aa14.18□□□□□ -0.14
TRIM28-212ENST00000597995 SRGAP2BP0DMP2 458 aa14.18□□□□□ -0.14
TRIM28-212ENST00000597995 IBSPP21815 317 aaPredicted RBP14.18□□□□□ -0.14
TRIM28-212ENST00000597995 RPS6KB1P23443 525 aa14.18□□□□□ -0.14
TRIM28-212ENST00000597995 KCNC3Q14003 757 aa14.18□□□□□ -0.14
TRIM28-212ENST00000597995 PFKFB3Q16875 520 aaPredicted RBP14.18□□□□□ -0.14
TRIM28-212ENST00000597995 JAKMIP3Q5VZ66 844 aa14.18□□□□□ -0.14
TRIM28-212ENST00000597995 FBXL16Q8N461 479 aa14.18□□□□□ -0.14
TRIM28-212ENST00000597995 MRPS27Q92552 414 aaKnown RBP14.18□□□□□ -0.14
TRIM28-212ENST00000597995 BRF1Q92994 677 aa14.18□□□□□ -0.14
TRIM28-212ENST00000597995 OSMRQ99650 979 aa14.18□□□□□ -0.14
TRIM28-212ENST00000597995 AGXT2Q9BYV1 514 aa14.18□□□□□ -0.14
TRIM28-212ENST00000597995 ZMYND12Q9H0C1 365 aa14.18□□□□□ -0.14
TRIM28-212ENST00000597995 TMEM117Q9H0C3 514 aa14.18□□□□□ -0.14
TRIM28-212ENST00000597995 PCDHA10Q9Y5I2 948 aa14.18□□□□□ -0.14
TRIM28-212ENST00000597995 MYH9P35579 1960 aaKnown RBP14.18□□□□□ -0.14
TRIM28-212ENST00000597995 CCDC196A0A1B0GTZ2 297 aa14.17□□□□□ -0.14
TRIM28-212ENST00000597995 REC8O95072 547 aa14.17□□□□□ -0.14
TRIM28-212ENST00000597995 VTNP04004 478 aa14.17□□□□□ -0.14
TRIM28-212ENST00000597995 PSAPP07602 524 aa14.17□□□□□ -0.14
TRIM28-212ENST00000597995 FGFR1P11362 822 aa14.17□□□□□ -0.14
TRIM28-212ENST00000597995 BLOC1S2Q6QNY1 142 aa14.17□□□□□ -0.14
TRIM28-212ENST00000597995 SUGP1Q8IWZ8 645 aaKnown RBP14.17□□□□□ -0.14
TRIM28-212ENST00000597995 METTL13Q8N6R0 699 aa14.17□□□□□ -0.14
TRIM28-212ENST00000597995 VN1R2Q8NFZ6 395 aa14.17□□□□□ -0.14
TRIM28-212ENST00000597995 CCDC12Q8WUD4 166 aaPredicted RBP14.17□□□□□ -0.14
TRIM28-212ENST00000597995 FAM167AQ96KS9 214 aa14.17□□□□□ -0.14
TRIM28-212ENST00000597995 S1PR5Q9H228 398 aa14.17□□□□□ -0.14
TRIM28-212ENST00000597995 C6orf50Q9HD87 102 aa14.17□□□□□ -0.14
TRIM28-212ENST00000597995 NGRNQ9NPE2 291 aaKnown RBP14.17□□□□□ -0.14
TRIM28-212ENST00000597995 TCEAL9Q9UHQ7 104 aa14.17□□□□□ -0.14
TRIM28-212ENST00000597995 ADAMTS3O15072 1205 aa14.16□□□□□ -0.14
TRIM28-212ENST00000597995 ZSCAN20P17040 1043 aaPredicted RBP14.16□□□□□ -0.14
TRIM28-212ENST00000597995 HOXB8P17481 243 aaPredicted RBP14.16□□□□□ -0.14
TRIM28-212ENST00000597995 TMOD1P28289 359 aa14.16□□□□□ -0.14
TRIM28-212ENST00000597995 CIITAP33076 1130 aa14.16□□□□□ -0.14
TRIM28-212ENST00000597995 PPM1AP35813 382 aa14.16□□□□□ -0.14
TRIM28-212ENST00000597995 PTPN5P54829 565 aa14.16□□□□□ -0.14
TRIM28-212ENST00000597995 SIGLEC14Q08ET2 396 aa14.16□□□□□ -0.14
TRIM28-212ENST00000597995 ANKRD54Q6NXT1 300 aa14.16□□□□□ -0.14
TRIM28-212ENST00000597995 REXO1Q8N1G1 1221 aaKnown RBP14.16□□□□□ -0.14
TRIM28-212ENST00000597995 FBXL6Q8N531 539 aa14.16□□□□□ -0.14
TRIM28-212ENST00000597995 LINC01465Q8N7H1 131 aa14.16□□□□□ -0.14
TRIM28-212ENST00000597995 RPGRIP1Q96KN7 1286 aa14.16□□□□□ -0.14
TRIM28-212ENST00000597995 CASD1Q96PB1 797 aa14.16□□□□□ -0.14
TRIM28-212ENST00000597995 MAP7D2Q96T17 732 aa14.16□□□□□ -0.14
TRIM28-212ENST00000597995 ADAMTS10Q9H324 1103 aa14.16□□□□□ -0.14
TRIM28-212ENST00000597995 HCSTQ9UBK5 93 aa14.16□□□□□ -0.14
TRIM28-212ENST00000597995 NID2Q14112 1375 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms