RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 C12orf42Q96LP6 360 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 SELENOOQ9BVL4 669 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 HOMER3Q9NSC5 361 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 ABHD10Q9NUJ1 306 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 NPHP3-ACAD11A0A0J9YXS1 232 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 A0A0U1RQJ8 604 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 ADM5C9JUS6 153 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 ZBED4O75132 1171 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 USP2O75604 605 aaPredicted RBP16.81■□□□□ 0.28
PNKP-204ENST00000594661 PSMD10O75832 226 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 ARP10275 920 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 SLC12A3P55017 1021 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 CYP4A11Q02928 519 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 RBBP5Q15291 538 aaKnown RBP16.81■□□□□ 0.28
PNKP-204ENST00000594661 C9orf131Q5VYM1 1079 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.81■□□□□ 0.28
PNKP-204ENST00000594661 OTOP1Q7RTM1 612 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 GPBP1Q86WP2 473 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 MCF2L2Q86YR7 1114 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 GLIS3Q8NEA6 775 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 ATRIPQ8WXE1 791 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 NUCKS1Q9H1E3 243 aaKnown RBP16.81■□□□□ 0.28
PNKP-204ENST00000594661 RABEP2Q9H5N1 569 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 CTDP1Q9Y5B0 961 aaPredicted RBP16.81■□□□□ 0.28
PNKP-204ENST00000594661 COL11A1P12107 1806 aaPredicted RBP16.8■□□□□ 0.28
PNKP-204ENST00000594661 RNF225M0QZC1 329 aaPredicted RBP16.8■□□□□ 0.28
PNKP-204ENST00000594661 CYP11B2P19099 503 aa16.8■□□□□ 0.28
PNKP-204ENST00000594661 SLC8A1P32418 973 aa16.8■□□□□ 0.28
PNKP-204ENST00000594661 CACNB1Q02641 598 aaPredicted RBP16.8■□□□□ 0.28
PNKP-204ENST00000594661 COASYQ13057 564 aa16.8■□□□□ 0.28
PNKP-204ENST00000594661 FAM114A1Q8IWE2 563 aa16.8■□□□□ 0.28
PNKP-204ENST00000594661 SYTL5Q8TDW5 730 aaPredicted RBP16.8■□□□□ 0.28
PNKP-204ENST00000594661 EIF2AK1Q9BQI3 630 aaKnown RBP16.8■□□□□ 0.28
PNKP-204ENST00000594661 TUBGCP2Q9BSJ2 902 aa16.8■□□□□ 0.28
PNKP-204ENST00000594661 SEMA6BQ9H3T3 888 aa16.8■□□□□ 0.28
PNKP-204ENST00000594661 ACTR5Q9H9F9 607 aaPredicted RBP16.8■□□□□ 0.28
PNKP-204ENST00000594661 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.8■□□□□ 0.28
PNKP-204ENST00000594661 CHMP2AO43633 222 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 ITGB5P18084 799 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 FECHP22830 423 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 KRT9P35527 623 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 NAA25Q14CX7 972 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 ARSHQ5FYA8 562 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 CEP57Q86XR8 500 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 ZNF507Q8TCN5 953 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 CNOT6LQ96LI5 555 aaKnown RBP16.79■□□□□ 0.28
PNKP-204ENST00000594661 RGL1Q9NZL6 768 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 AFG3L2Q9Y4W6 797 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 RIPK3Q9Y572 518 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 A0A1W2PQC6 194 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 B4DLN1 442 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 C19orf81C9J6K1 198 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 RPS6P62753 249 aaKnown RBP16.79■□□□□ 0.28
PNKP-204ENST00000594661 PABPC4Q13310 644 aaKnown RBP eCLIP16.79■□□□□ 0.28
PNKP-204ENST00000594661 PPP2R5CQ13362 524 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 CYB5D1Q6P9G0 228 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 CCNI2Q6ZMN8 369 aaPredicted RBP16.79■□□□□ 0.28
PNKP-204ENST00000594661 KIAA1328Q86T90 577 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 TMTC1Q8IUR5 882 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 REPS2Q8NFH8 660 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 RPGRIP1Q96KN7 1286 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 MXRA8Q9BRK3 442 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 ZNF577Q9BSK1 485 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 POLR3CQ9BUI4 534 aaPredicted RBP16.79■□□□□ 0.28
PNKP-204ENST00000594661 KIF9Q9HAQ2 790 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 PANK4Q9NVE7 773 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 SNCAIPQ9Y6H5 919 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 WDR90Q96KV7 1748 aa16.79■□□□□ 0.28
PNKP-204ENST00000594661 GAS7O60861 476 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 MTIF2P46199 727 aaKnown RBP16.78■□□□□ 0.28
PNKP-204ENST00000594661 DNM2P50570 870 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 RPS6KA3P51812 740 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 VGLL4Q14135 290 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 LRRC41Q15345 812 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 NAA35Q5VZE5 725 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 FGFBP2Q9BYJ0 223 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 BMP2KQ9NSY1 1161 aaPredicted RBP16.78■□□□□ 0.28
PNKP-204ENST00000594661 DNM3Q9UQ16 869 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 STK24Q9Y6E0 443 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 PAPPA2Q9BXP8 1791 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 OPA1O60313 960 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 FDX1P10109 184 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 PECAM1P16284 738 aaPredicted RBP16.78■□□□□ 0.28
PNKP-204ENST00000594661 DSG3P32926 999 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 ERVK-24P63145 666 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 PSMD2Q13200 908 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 SLC5A9Q2M3M2 681 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 CENPPQ6IPU0 288 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 CYP26C1Q6V0L0 522 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 GUF1Q8N442 669 aaKnown RBP16.78■□□□□ 0.28
PNKP-204ENST00000594661 AENQ8WTP8 325 aaKnown RBP16.78■□□□□ 0.28
PNKP-204ENST00000594661 DCPSQ96C86 337 aaKnown RBP16.78■□□□□ 0.28
PNKP-204ENST00000594661 TAAR1Q96RJ0 339 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 HSD17B14Q9BPX1 270 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 EPN3Q9H201 632 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 CPSF2Q9P2I0 782 aaKnown RBP16.78■□□□□ 0.28
PNKP-204ENST00000594661 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.78■□□□□ 0.28
PNKP-204ENST00000594661 OTOFQ9HC10 1997 aa16.78■□□□□ 0.28
PNKP-204ENST00000594661 TTC26A0AVF1 554 aa16.77■□□□□ 0.28
PNKP-204ENST00000594661 FRMD3A2A2Y4 597 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms