RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 DCAF17Q5H9S7 520 aaPredicted RBP12.65□□□□□ -0.38
ZNF540-210ENST00000592533 SYDE2Q5VT97 1194 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 RINT1Q6NUQ1 792 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 KLHL7Q8IXQ5 586 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 C3orf20Q8ND61 904 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 BHMT2Q9H2M3 363 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 SEL1LQ9UBV2 794 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 FAM198AQ9UFP1 575 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 CEP104O60308 925 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 MDH1P40925 334 aaKnown RBP12.65□□□□□ -0.38
ZNF540-210ENST00000592533 ZNF131P52739 623 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 POU5F1Q01860 360 aaKnown RBP12.65□□□□□ -0.38
ZNF540-210ENST00000592533 ICA1Q05084 483 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 BIRC3Q13489 604 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 MTMR3Q13615 1198 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 ENOX2Q16206 610 aaKnown RBP12.65□□□□□ -0.38
ZNF540-210ENST00000592533 KCTD16Q68DU8 428 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 C1orf186Q6ZWK4 172 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 SH3BP5LQ7L8J4 393 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 PEX26Q7Z412 305 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 STK33Q9BYT3 514 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 DDTLA6NHG4 134 aaPredicted RBP12.64□□□□□ -0.39
ZNF540-210ENST00000592533 F5H6K3 240 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 F8VZ95 297 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 NDUFAB1O14561 156 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 GCNT3O95395 438 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 TMEM253P0C7T8 217 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 NPR1P16066 1061 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 LMNB1P20700 586 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 SOX5P35711 763 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 PSMC2P35998 433 aaKnown RBP12.64□□□□□ -0.39
ZNF540-210ENST00000592533 KLRC3Q07444 240 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 PPP2R5CQ13362 524 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 LNX1Q8TBB1 728 aaPredicted RBP12.64□□□□□ -0.39
ZNF540-210ENST00000592533 UIMC1Q96RL1 719 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 DMAC2Q9NW81 257 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 KCND2Q9NZV8 630 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 NDUFB10O96000 172 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 PPATQ06203 517 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 SHROOM1Q2M3G4 852 aaPredicted RBP12.64□□□□□ -0.39
ZNF540-210ENST00000592533 ARFGAP2Q8N6H7 521 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 TMEM174Q8WUU8 243 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 FIZ1Q96SL8 496 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 SPATA31A6Q5VVP1 1343 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 RGPD3A6NKT7 1758 aaPredicted RBP12.64□□□□□ -0.39
ZNF540-210ENST00000592533 RGPD4Q7Z3J3 1758 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 EML1O00423 815 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 PPP2R5AQ15172 486 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 AGBL2Q5U5Z8 902 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 MAATS1Q7Z4T9 603 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 PODNQ7Z5L7 613 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 FAM186BQ8IYM0 893 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 RFFLQ8WZ73 363 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 GPR88Q9GZN0 384 aa12.64□□□□□ -0.39
ZNF540-210ENST00000592533 ANKRD65E5RJM6 399 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 KRIT1O00522 736 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 EVI5O60447 810 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 SLURP2P0DP57 97 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 RFX1P22670 979 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 FMO5P49326 533 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 ATP1A2P50993 1020 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 HADHBP55084 474 aaKnown RBP12.63□□□□□ -0.39
ZNF540-210ENST00000592533 RNASE9P60153 205 aaKnown RBP12.63□□□□□ -0.39
ZNF540-210ENST00000592533 ZNF844Q08AG5 666 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 TCEAL1Q15170 157 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 PPP2R5EQ16537 467 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 CEP85LQ5SZL2 805 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 NAA35Q5VZE5 725 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 SUGP1Q8IWZ8 645 aaKnown RBP12.63□□□□□ -0.39
ZNF540-210ENST00000592533 CCDC26Q8TAB7 109 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 GJD4Q96KN9 370 aaPredicted RBP12.63□□□□□ -0.39
ZNF540-210ENST00000592533 NEUROG2Q9H2A3 272 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 GOLPH3Q9H4A6 298 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 GOLGA6L10A6NI86 522 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 PPP1R12BO60237 982 aaPredicted RBP12.63□□□□□ -0.39
ZNF540-210ENST00000592533 PSMD10O75832 226 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 GALCP54803 685 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 KCNA1Q09470 495 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 CLUL1Q15846 466 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 TCERG1LQ5VWI1 586 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 TTC19Q6DKK2 380 aaPredicted RBP12.63□□□□□ -0.39
ZNF540-210ENST00000592533 OTOP1Q7RTM1 612 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 SLC9A9Q8IVB4 645 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 SLC5A5Q92911 643 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 TXLNGYQ9BZA5 131 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 FAM114A2Q9NRY5 505 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 SLC12A6Q9UHW9 1150 aa12.63□□□□□ -0.39
ZNF540-210ENST00000592533 GCOM1H8Y6P7 765 aaPredicted RBP12.62□□□□□ -0.39
ZNF540-210ENST00000592533 DDX3YO15523 660 aaKnown RBP12.62□□□□□ -0.39
ZNF540-210ENST00000592533 ERLIN2O94905 339 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 FAM107AO95990 144 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 PAEPP09466 180 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 MYZAPP0CAP1 466 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 GUCY1A3Q02108 690 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 TRAF1Q13077 416 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 MYBPC2Q14324 1141 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 HLTFQ14527 1009 aaKnown RBP eCLIP12.62□□□□□ -0.39
ZNF540-210ENST00000592533 DOK7Q18PE1 504 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 RUFY4Q6ZNE9 571 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 TMC3Q7Z5M5 1100 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms