RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 DBR1Q9UK59 544 aaKnown RBP23.16■■□□□ 1.3
DNMT1-227ENST00000592342 DNM3Q9UQ16 869 aa23.16■■□□□ 1.3
DNMT1-227ENST00000592342 AKT3Q9Y243 479 aa23.16■■□□□ 1.3
DNMT1-227ENST00000592342 ARHGEF35A5YM69 484 aa23.15■■□□□ 1.3
DNMT1-227ENST00000592342 SLC26A4O43511 780 aa23.15■■□□□ 1.3
DNMT1-227ENST00000592342 RFC2P35250 354 aa23.15■■□□□ 1.3
DNMT1-227ENST00000592342 ME1P48163 572 aa23.15■■□□□ 1.3
DNMT1-227ENST00000592342 MRPS6P82932 125 aaKnown RBP23.15■■□□□ 1.3
DNMT1-227ENST00000592342 TMEM62Q0P6H9 643 aa23.15■■□□□ 1.3
DNMT1-227ENST00000592342 RPUSD2Q8IZ73 545 aaKnown RBP23.15■■□□□ 1.3
DNMT1-227ENST00000592342 KIAA0319LQ8IZA0 1049 aa23.15■■□□□ 1.3
DNMT1-227ENST00000592342 PLIN2Q99541 437 aa23.15■■□□□ 1.3
DNMT1-227ENST00000592342 UBE2OQ9C0C9 1292 aaKnown RBP23.15■■□□□ 1.3
DNMT1-227ENST00000592342 EMC2Q15006 297 aa23.14■■□□□ 1.29
DNMT1-227ENST00000592342 DEFB128Q7Z7B8 93 aa23.14■■□□□ 1.29
DNMT1-227ENST00000592342 SPATA32Q96LK8 384 aa23.14■■□□□ 1.29
DNMT1-227ENST00000592342 CEP89Q96ST8 783 aa23.14■■□□□ 1.29
DNMT1-227ENST00000592342 MTRQ99707 1265 aa23.14■■□□□ 1.29
DNMT1-227ENST00000592342 GDF15Q99988 308 aa23.14■■□□□ 1.29
DNMT1-227ENST00000592342 ATP6V0A4Q9HBG4 840 aa23.14■■□□□ 1.29
DNMT1-227ENST00000592342 CCDC39Q9UFE4 941 aa23.14■■□□□ 1.29
DNMT1-227ENST00000592342 GINS2Q9Y248 185 aa23.14■■□□□ 1.29
DNMT1-227ENST00000592342 TRPV2Q9Y5S1 764 aa23.14■■□□□ 1.29
DNMT1-227ENST00000592342 CDY2AQ9Y6F7 541 aa23.14■■□□□ 1.29
DNMT1-227ENST00000592342 DNAH12Q6ZR08 3092 aa23.13■■□□□ 1.29
DNMT1-227ENST00000592342 PDE4DIPQ5VU43 2346 aa23.13■■□□□ 1.29
DNMT1-227ENST00000592342 E9PMD0 336 aa23.13■■□□□ 1.29
DNMT1-227ENST00000592342 USO1O60763 962 aaKnown RBP23.13■■□□□ 1.29
DNMT1-227ENST00000592342 CUTAO60888 179 aa23.13■■□□□ 1.29
DNMT1-227ENST00000592342 DGAT1O75907 488 aa23.13■■□□□ 1.29
DNMT1-227ENST00000592342 VTNP04004 478 aa23.13■■□□□ 1.29
DNMT1-227ENST00000592342 CHRDL2Q6WN34 429 aa23.13■■□□□ 1.29
DNMT1-227ENST00000592342 KCTD17Q8N5Z5 321 aa23.13■■□□□ 1.29
DNMT1-227ENST00000592342 SYMPKQ92797 1274 aaKnown RBP23.13■■□□□ 1.29
DNMT1-227ENST00000592342 EPSTI1Q96J88 318 aa23.13■■□□□ 1.29
DNMT1-227ENST00000592342 SCLT1Q96NL6 688 aa23.13■■□□□ 1.29
DNMT1-227ENST00000592342 IPO9Q96P70 1041 aaKnown RBP23.13■■□□□ 1.29
DNMT1-227ENST00000592342 PPP1R16BQ96T49 567 aa23.13■■□□□ 1.29
DNMT1-227ENST00000592342 BHMT2Q9H2M3 363 aa23.13■■□□□ 1.29
DNMT1-227ENST00000592342 DHX33Q9H6R0 707 aaKnown RBP23.13■■□□□ 1.29
DNMT1-227ENST00000592342 IL23AQ9NPF7 189 aa23.13■■□□□ 1.29
DNMT1-227ENST00000592342 CHMP5Q9NZZ3 219 aa23.13■■□□□ 1.29
DNMT1-227ENST00000592342 RCOR1Q9UKL0 485 aa23.13■■□□□ 1.29
DNMT1-227ENST00000592342 IGKV6-21A0A0C4DH24 114 aa23.12■■□□□ 1.29
DNMT1-227ENST00000592342 GAS2O43903 313 aaKnown RBP23.12■■□□□ 1.29
DNMT1-227ENST00000592342 GRB10Q13322 594 aa23.12■■□□□ 1.29
DNMT1-227ENST00000592342 KARSQ15046 597 aaKnown RBP23.12■■□□□ 1.29
DNMT1-227ENST00000592342 FAM26DQ5JW98 314 aa23.12■■□□□ 1.29
DNMT1-227ENST00000592342 HYIQ5T013 277 aa23.12■■□□□ 1.29
DNMT1-227ENST00000592342 TCP11Q8WWU5 503 aa23.12■■□□□ 1.29
DNMT1-227ENST00000592342 CHAMP1Q96JM3 812 aa23.12■■□□□ 1.29
DNMT1-227ENST00000592342 PNMA5Q96PV4 448 aa23.12■■□□□ 1.29
DNMT1-227ENST00000592342 CELF4Q9BZC1 486 aaKnown RBP23.12■■□□□ 1.29
DNMT1-227ENST00000592342 CCSER1Q9C0I3 900 aa23.12■■□□□ 1.29
DNMT1-227ENST00000592342 SCAND2PQ9GZW5 306 aaPredicted RBP23.12■■□□□ 1.29
DNMT1-227ENST00000592342 SUCLA2Q9P2R7 463 aaPredicted RBP23.12■■□□□ 1.29
DNMT1-227ENST00000592342 LTBP2Q14767 1821 aa23.12■■□□□ 1.29
DNMT1-227ENST00000592342 EYA4O95677 639 aa23.11■■□□□ 1.29
DNMT1-227ENST00000592342 CHRNA1P02708 482 aa23.11■■□□□ 1.29
DNMT1-227ENST00000592342 PFKMP08237 780 aa23.11■■□□□ 1.29
DNMT1-227ENST00000592342 ACRP10323 421 aa23.11■■□□□ 1.29
DNMT1-227ENST00000592342 TRAF7Q6Q0C0 670 aa23.11■■□□□ 1.29
DNMT1-227ENST00000592342 PADI6Q6TGC4 694 aa23.11■■□□□ 1.29
DNMT1-227ENST00000592342 LINC01465Q8N7H1 131 aa23.11■■□□□ 1.29
DNMT1-227ENST00000592342 SSBP05455 408 aaKnown RBP eCLIP23.1■■□□□ 1.29
DNMT1-227ENST00000592342 CDC42EP1Q00587 391 aa23.1■■□□□ 1.29
DNMT1-227ENST00000592342 MGAT3Q09327 533 aa23.1■■□□□ 1.29
DNMT1-227ENST00000592342 DRP2Q13474 957 aa23.1■■□□□ 1.29
DNMT1-227ENST00000592342 TMEM119Q4V9L6 283 aa23.1■■□□□ 1.29
DNMT1-227ENST00000592342 PSRC1Q6PGN9 363 aaPredicted RBP23.1■■□□□ 1.29
DNMT1-227ENST00000592342 USP49Q70CQ1 688 aa23.1■■□□□ 1.29
DNMT1-227ENST00000592342 ZNF710Q8N1W2 664 aa23.1■■□□□ 1.29
DNMT1-227ENST00000592342 LEO1Q8WVC0 666 aaPredicted RBP23.1■■□□□ 1.29
DNMT1-227ENST00000592342 TMEM143Q96AN5 459 aa23.1■■□□□ 1.29
DNMT1-227ENST00000592342 PCDHA7Q9UN72 937 aa23.1■■□□□ 1.29
DNMT1-227ENST00000592342 NBNO60934 754 aa23.09■■□□□ 1.29
DNMT1-227ENST00000592342 FGBP02675 491 aa23.09■■□□□ 1.29
DNMT1-227ENST00000592342 PLCG1P19174 1290 aa23.09■■□□□ 1.29
DNMT1-227ENST00000592342 BMP8BP34820 402 aa23.09■■□□□ 1.29
DNMT1-227ENST00000592342 NLRP11P59045 1033 aaKnown RBP23.09■■□□□ 1.29
DNMT1-227ENST00000592342 MKRN4PQ13434 485 aaPredicted RBP23.09■■□□□ 1.29
DNMT1-227ENST00000592342 KIZQ2M2Z5 673 aa23.09■■□□□ 1.29
DNMT1-227ENST00000592342 MAEAQ7L5Y9 396 aa23.09■■□□□ 1.29
DNMT1-227ENST00000592342 KCNK18Q7Z418 384 aa23.09■■□□□ 1.29
DNMT1-227ENST00000592342 RHPN2Q8IUC4 686 aa23.09■■□□□ 1.29
DNMT1-227ENST00000592342 MCPH1Q8NEM0 835 aa23.09■■□□□ 1.29
DNMT1-227ENST00000592342 NLRP7Q8WX94 980 aa23.09■■□□□ 1.29
DNMT1-227ENST00000592342 PSPC1Q8WXF1 523 aaKnown RBP23.09■■□□□ 1.29
DNMT1-227ENST00000592342 GHRP10912 638 aa23.08■■□□□ 1.29
DNMT1-227ENST00000592342 ACTN1P12814 892 aa23.08■■□□□ 1.29
DNMT1-227ENST00000592342 EPHB4P54760 987 aa23.08■■□□□ 1.29
DNMT1-227ENST00000592342 MBTPS1Q14703 1052 aa23.08■■□□□ 1.29
DNMT1-227ENST00000592342 RRAGBQ5VZM2 374 aa23.08■■□□□ 1.29
DNMT1-227ENST00000592342 ZNF668Q96K58 619 aaPredicted RBP23.08■■□□□ 1.29
DNMT1-227ENST00000592342 XPNPEP1Q9NQW7 623 aa23.08■■□□□ 1.29
DNMT1-227ENST00000592342 FAM13BQ9NYF5 915 aa23.08■■□□□ 1.29
DNMT1-227ENST00000592342 TANC1Q9C0D5 1861 aa23.08■■□□□ 1.29
DNMT1-227ENST00000592342 PLA2G4BP0C869 781 aa23.07■■□□□ 1.28
DNMT1-227ENST00000592342 CYP11B2P19099 503 aa23.07■■□□□ 1.28
DNMT1-227ENST00000592342 GPC3P51654 580 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms