RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 PLA2G4FQ68DD2 849 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.27□□□□□ -0.612e-8■■■■■ 27.8
BRCA1-227ENST00000591849 TSHZ1Q6ZSZ6 1077 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 C4orf19Q8IY42 314 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 ZNF710Q8N1W2 664 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 NLRP7Q8WX94 980 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 SLC7A3Q8WY07 619 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 RAB34Q9BZG1 259 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 CYP26B1Q9NR63 512 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 SQORQ9Y6N5 450 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 TTC28Q96AY4 2481 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 TMEM150BA6NC51 233 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 GPR182O15218 404 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 SLITRK3O94933 977 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 YWHABP31946 246 aaKnown RBP11.26□□□□□ -0.61
BRCA1-227ENST00000591849 CRYBB1P53674 252 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-227ENST00000591849 NPEPPSP55786 919 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 PTGDRQ13258 359 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 NBR1Q14596 966 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 TCTN1Q2MV58 587 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 TMCO2Q7Z6W1 182 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-227ENST00000591849 INTS4Q96HW7 963 aaKnown RBP11.26□□□□□ -0.61
BRCA1-227ENST00000591849 ZNF668Q96K58 619 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-227ENST00000591849 GUCD1Q96NT3 240 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 YME1L1Q96TA2 773 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 RAD9AQ99638 391 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 OSMRQ99650 979 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 FTHL17Q9BXU8 183 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 OSBPL7Q9BZF2 842 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 SUCLA2Q9P2R7 463 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-227ENST00000591849 LRWD1Q9UFC0 647 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 PADI3Q9ULW8 664 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 PPME1Q9Y570 386 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 PCDHB6Q9Y5E3 794 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 STK24Q9Y6E0 443 aa11.26□□□□□ -0.61
BRCA1-227ENST00000591849 KAT6AQ92794 2004 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 DENND3A2RUS2 1198 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 POTEMA6NI47 508 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 LAD1O00515 517 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 ENPP3O14638 875 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 MAFO75444 373 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-227ENST00000591849 CA3P07451 260 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 MYOGP15173 224 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 CCT6AP40227 531 aaKnown RBP11.25□□□□□ -0.61
BRCA1-227ENST00000591849 RFC5P40937 340 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 SPIRE1Q08AE8 756 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 TARBP2Q15633 366 aaKnown RBP11.25□□□□□ -0.61
BRCA1-227ENST00000591849 HAUS3Q68CZ6 603 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 DTHD1Q6ZMT9 781 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 ANO5Q75V66 913 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 TCP11Q8WWU5 503 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 SNX21Q969T3 373 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 GAS2L1Q99501 681 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-227ENST00000591849 GCOM2Q9BZD3 368 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-227ENST00000591849 AGO3Q9H9G7 860 aaKnown RBP11.25□□□□□ -0.61
BRCA1-227ENST00000591849 CDHR5Q9HBB8 845 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 TUFT1Q9NNX1 390 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 LRFN2Q9ULH4 789 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 YBX2Q9Y2T7 364 aaKnown RBP11.25□□□□□ -0.61
BRCA1-227ENST00000591849 NOC2LQ9Y3T9 749 aaKnown RBP11.25□□□□□ -0.61
BRCA1-227ENST00000591849 INSL6Q9Y581 213 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 KDM3AQ9Y4C1 1321 aa11.25□□□□□ -0.61
BRCA1-227ENST00000591849 TRIP12Q14669 1992 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-227ENST00000591849 NCOR1O75376 2440 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 GBF1Q92538 1859 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 GPR32O75388 356 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 STBD1O95210 358 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 GJB5O95377 273 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 STAG3L1P0CL83 205 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 ZSCAN20P17040 1043 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-227ENST00000591849 TOB1P50616 345 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-227ENST00000591849 GRIN2CQ14957 1233 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 KRT79Q5XKE5 535 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 FAM43BQ6ZT52 329 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-227ENST00000591849 BRAPQ7Z569 592 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 FERMT3Q86UX7 667 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 RHPN2Q8IUC4 686 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.24□□□□□ -0.61
BRCA1-227ENST00000591849 PIGOQ8TEQ8 1089 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 PSPC1Q8WXF1 523 aaKnown RBP11.24□□□□□ -0.61
BRCA1-227ENST00000591849 TMEM143Q96AN5 459 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 NACC1Q96RE7 527 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 CDX2Q99626 313 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-227ENST00000591849 HSD17B14Q9BPX1 270 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 INO80BQ9C086 356 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-227ENST00000591849 TTYH1Q9H313 450 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-227ENST00000591849 CERS4Q9HA82 394 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 BMP2KQ9NSY1 1161 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-227ENST00000591849 ANKEF1Q9NU02 776 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-227ENST00000591849 WRAP73Q9P2S5 460 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-227ENST00000591849 ST3GAL5Q9UNP4 418 aa11.24□□□□□ -0.61
BRCA1-227ENST00000591849 A0A087WWV3 80 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-227ENST00000591849 ASAP2O43150 1006 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 GAS2O43903 313 aaKnown RBP11.23□□□□□ -0.61
BRCA1-227ENST00000591849 LYPLA2O95372 231 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 BMP15O95972 392 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 SRGAP2CP0DJJ0 459 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 XRCC6P12956 609 aaKnown RBP eCLIP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms