RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 NR2F2P24468 414 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 ZNF131P52739 623 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 FCGRTP55899 365 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 PSMC6P62333 389 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 ADAM9Q13443 819 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 CCDC122Q5T0U0 273 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 PCNX4Q63HM2 1172 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 GPAT2Q6NUI2 795 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 RINT1Q6NUQ1 792 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 GADL1Q6ZQY3 521 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 RSRC2Q7L4I2 434 aaKnown RBP10.94□□□□□ -0.66
VPS25-202ENST00000589219 CACNA2D4Q7Z3S7 1137 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 LRRN4CLQ8ND94 238 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 CYP2W1Q8TAV3 490 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 SH3TC2Q8TF17 1288 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 BAP1Q92560 729 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 DYDC2Q96IM9 177 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 CCDC42Q96M95 316 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 PURBQ96QR8 312 aaKnown RBP10.94□□□□□ -0.66
VPS25-202ENST00000589219 RUSC1Q9BVN2 902 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 LSM14BQ9BX40 385 aaKnown RBP10.94□□□□□ -0.66
VPS25-202ENST00000589219 MAF1Q9H063 256 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 UNC45AQ9H3U1 944 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 DEF6Q9H4E7 631 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 PARVGQ9HBI0 331 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 SLC38A10Q9HBR0 1119 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 LUC7LQ9NQ29 371 aaKnown RBP10.94□□□□□ -0.66
VPS25-202ENST00000589219 FAM207AQ9NSI2 230 aaPredicted RBP10.94□□□□□ -0.66
VPS25-202ENST00000589219 FBXO28Q9NVF7 368 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 TBC1D7Q9P0N9 293 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.94□□□□□ -0.66
VPS25-202ENST00000589219 PPP1R9AQ9ULJ8 1098 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 CTDP1Q9Y5B0 961 aaPredicted RBP10.94□□□□□ -0.66
VPS25-202ENST00000589219 ASTN1O14525 1302 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 MYPNQ86TC9 1320 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 LRRC53A6NM62 1247 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 IPO5O00410 1097 aaKnown RBP10.93□□□□□ -0.66
VPS25-202ENST00000589219 CHMP2AO43633 222 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 ZBED4O75132 1171 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 GCNT3O95395 438 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 OSBPP22059 807 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 GUCY2CP25092 1073 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 GRK4P32298 578 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 KIF11P52732 1056 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 CHMP4BP1P59074 171 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 CKAP4Q07065 602 aaKnown RBP10.93□□□□□ -0.66
VPS25-202ENST00000589219 KIF5AQ12840 1032 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 ALCAMQ13740 583 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 CTTNQ14247 550 aaKnown RBP10.93□□□□□ -0.66
VPS25-202ENST00000589219 TEX35Q5T0J7 233 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 XRRA1Q6P2D8 792 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 C1orf186Q6ZWK4 172 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 GOLGA5Q8TBA6 731 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 SMCR8Q8TEV9 937 aaPredicted RBP10.93□□□□□ -0.66
VPS25-202ENST00000589219 CLEC4DQ8WXI8 215 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 EEF2KMTQ96G04 330 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 UIMC1Q96RL1 719 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 MKNK1Q9BUB5 465 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 TIPINQ9BVW5 301 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 IRX2Q9BZI1 471 aaPredicted RBP10.93□□□□□ -0.66
VPS25-202ENST00000589219 OGFRQ9NZT2 677 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 ARMCX3Q9UH62 379 aaPredicted RBP10.93□□□□□ -0.66
VPS25-202ENST00000589219 TCEAL9Q9UHQ7 104 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 PNMA3Q9UL41 463 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 MYO6Q9UM54 1294 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 DAAM1Q9Y4D1 1078 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 UBIAD1Q9Y5Z9 338 aa10.93□□□□□ -0.66
VPS25-202ENST00000589219 ATP8B3O60423 1300 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 A0A0U1RQJ8 604 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 ARHGEF35A5YM69 484 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 EPHB6O15197 1021 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 ECM2O94769 699 aaPredicted RBP10.92□□□□□ -0.66
VPS25-202ENST00000589219 SLITRK3O94933 977 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 MYCP01106 439 aaPredicted RBP10.92□□□□□ -0.66
VPS25-202ENST00000589219 AFPP02771 609 aaKnown RBP10.92□□□□□ -0.66
VPS25-202ENST00000589219 NR3C1P04150 777 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 SERPING1P05155 500 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 TUBBP07437 444 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 MYBP10242 640 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 CYP2C8P10632 490 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 MAPTP10636 758 aaKnown RBP10.92□□□□□ -0.66
VPS25-202ENST00000589219 VCAM1P19320 739 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 ANXA13P27216 316 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 CASP5P51878 434 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 OAZ1P54368 228 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 UBXN2AP68543 259 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 AMPD2Q01433 879 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 RAD51AP2Q09MP3 1159 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 SFMBT2Q5VUG0 894 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 RRAGAQ7L523 313 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 TRAPPC11Q7Z392 1133 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 MIER3Q7Z3K6 550 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 TPH2Q8IWU9 490 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 PROCA1Q8NCQ7 364 aaPredicted RBP10.92□□□□□ -0.66
VPS25-202ENST00000589219 ATRIPQ8WXE1 791 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 TBC1D5Q92609 795 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 SECISBP2LQ93073 1101 aaKnown RBP10.92□□□□□ -0.66
VPS25-202ENST00000589219 RPGRIP1Q96KN7 1286 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 C12orf42Q96LP6 360 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 AGBL1Q96MI9 1066 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms