RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 SEPT9Q9UHD8 586 aaPredicted RBP10.84□□□□□ -0.67
APOC1-204ENST00000589078 STK24Q9Y6E0 443 aa10.84□□□□□ -0.67
APOC1-204ENST00000589078 SMIM35A0A1B0GVV1 85 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 DDX11L8A8MPP1 907 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 PRR33A8MZF0 331 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 EML1O00423 815 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 WNT7AO00755 349 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 LPXNO60711 386 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 CTSHP09668 335 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 SYT1P21579 422 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 KLRC1P26715 233 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 MRE11P49959 708 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 TBC1D8BQ0IIM8 1120 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 MARCH8Q5T0T0 291 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 ZNF618Q5T7W0 954 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 HAUS3Q68CZ6 603 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 MTHFD1LQ6UB35 978 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 RUFY4Q6ZNE9 571 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 OTUD6AQ7L8S5 288 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 METTL13Q8N6R0 699 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 BANK1Q8NDB2 785 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 GDPD5Q8WTR4 605 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 CCDC43Q96MW1 224 aaKnown RBP10.83□□□□□ -0.68
APOC1-204ENST00000589078 MAP7D2Q96T17 732 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 JPH2Q9BR39 696 aaPredicted RBP10.83□□□□□ -0.68
APOC1-204ENST00000589078 LXNQ9BS40 222 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 FAM49AQ9H0Q0 323 aaPredicted RBP10.83□□□□□ -0.68
APOC1-204ENST00000589078 TMEM60Q9H2L4 133 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 PPME1Q9Y570 386 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 MYH7BA7E2Y1 1941 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 SIP14410 1827 aa10.83□□□□□ -0.68
APOC1-204ENST00000589078 STX6O43752 255 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 ZNF862O60290 1169 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 EFCAB14O75071 495 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 BAIAP3O94812 1187 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 ATP4AP20648 1035 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 TECP42680 631 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 DNM2P50570 870 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 FXR2P51116 673 aaKnown RBP eCLIP10.82□□□□□ -0.68
APOC1-204ENST00000589078 SPIRE1Q08AE8 756 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 PTGDRQ13258 359 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 UGCGQ16739 394 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 DTHD1Q6ZMT9 781 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 TPH2Q8IWU9 490 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 C4orf19Q8IY42 314 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 PHOSPHO2Q8TCD6 241 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 TRAPPC12Q8WVT3 735 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 DNAJB3Q8WWF6 145 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 WNT8BQ93098 351 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 EIF2AK1Q9BQI3 630 aaKnown RBP10.82□□□□□ -0.68
APOC1-204ENST00000589078 NIFKQ9BYG3 293 aaKnown RBP10.82□□□□□ -0.68
APOC1-204ENST00000589078 PCDHB6Q9Y5E3 794 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 TET1Q8NFU7 2136 aa10.82□□□□□ -0.68
APOC1-204ENST00000589078 LCHNA4D1U4 455 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 ZBTB42B2RXF5 422 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 C22orf31O95567 290 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 CXCL10P02778 98 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 YWHABP31946 246 aaKnown RBP10.81□□□□□ -0.68
APOC1-204ENST00000589078 PRPHP41219 470 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 KCNJ6P48051 423 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 TOB1P50616 345 aaPredicted RBP10.81□□□□□ -0.68
APOC1-204ENST00000589078 MRPS6P82932 125 aaKnown RBP10.81□□□□□ -0.68
APOC1-204ENST00000589078 CDC42EP1Q00587 391 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 CYP4A11Q02928 519 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 NBR1Q14596 966 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 MTERF2Q49AM1 385 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 FAM26DQ5JW98 314 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 CNKSR3Q6P9H4 555 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 FERMT3Q86UX7 667 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 SLC7A3Q8WY07 619 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 SEPT8Q92599 483 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 DYDC2Q96IM9 177 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 CEP170P1Q96L14 293 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 ZSCAN16Q9H4T2 348 aaPredicted RBP10.81□□□□□ -0.68
APOC1-204ENST00000589078 UBE2ZQ9H832 354 aaPredicted RBP10.81□□□□□ -0.68
APOC1-204ENST00000589078 TUFT1Q9NNX1 390 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.81□□□□□ -0.68
APOC1-204ENST00000589078 RGL1Q9NZL6 768 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 AKT3Q9Y243 479 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 TRPV2Q9Y5S1 764 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 CFAP54Q96N23 3096 aa10.81□□□□□ -0.68
APOC1-204ENST00000589078 ABHD14A-ACY1A0A1B0GW23 586 aa10.8□□□□□ -0.68
APOC1-204ENST00000589078 POTEMA6NI47 508 aa10.8□□□□□ -0.68
APOC1-204ENST00000589078 GAS2O43903 313 aaKnown RBP10.8□□□□□ -0.68
APOC1-204ENST00000589078 NBNO60934 754 aa10.8□□□□□ -0.68
APOC1-204ENST00000589078 LYPLA2O95372 231 aa10.8□□□□□ -0.68
APOC1-204ENST00000589078 SSTR3P32745 418 aaPredicted RBP10.8□□□□□ -0.68
APOC1-204ENST00000589078 RFC5P40937 340 aa10.8□□□□□ -0.68
APOC1-204ENST00000589078 POLGP54098 1239 aaPredicted RBP10.8□□□□□ -0.68
APOC1-204ENST00000589078 NHLH1Q02575 133 aa10.8□□□□□ -0.68
APOC1-204ENST00000589078 IKBKEQ14164 716 aa10.8□□□□□ -0.68
APOC1-204ENST00000589078 CTTNQ14247 550 aaKnown RBP10.8□□□□□ -0.68
APOC1-204ENST00000589078 PDIA5Q14554 519 aa10.8□□□□□ -0.68
APOC1-204ENST00000589078 ODR4Q5SWX8 454 aa10.8□□□□□ -0.68
APOC1-204ENST00000589078 KRT79Q5XKE5 535 aa10.8□□□□□ -0.68
APOC1-204ENST00000589078 ARL6IP4Q66PJ3 421 aaKnown RBP10.8□□□□□ -0.68
APOC1-204ENST00000589078 EFCAB12Q6NXP0 572 aa10.8□□□□□ -0.68
APOC1-204ENST00000589078 TRAF7Q6Q0C0 670 aa10.8□□□□□ -0.68
APOC1-204ENST00000589078 FAM43BQ6ZT52 329 aaPredicted RBP10.8□□□□□ -0.68
APOC1-204ENST00000589078 TMCO2Q7Z6W1 182 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms