RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 FAM189BP81408 668 aa20.93■□□□□ 0.94
CCDC43-204ENST00000588687 DUSP6Q16828 381 aa20.93■□□□□ 0.94
CCDC43-204ENST00000588687 JAKMIP3Q5VZ66 844 aa20.93■□□□□ 0.94
CCDC43-204ENST00000588687 SWSAP1Q6NVH7 229 aa20.93■□□□□ 0.94
CCDC43-204ENST00000588687 MIS18BP1Q6P0N0 1132 aa20.93■□□□□ 0.94
CCDC43-204ENST00000588687 COLGALT1Q8NBJ5 622 aa20.93■□□□□ 0.94
CCDC43-204ENST00000588687 LENG9Q96B70 501 aa20.93■□□□□ 0.94
CCDC43-204ENST00000588687 PPP1R16BQ96T49 567 aa20.93■□□□□ 0.94
CCDC43-204ENST00000588687 ZMYND12Q9H0C1 365 aa20.93■□□□□ 0.94
CCDC43-204ENST00000588687 TMEM161AQ9NX61 479 aa20.93■□□□□ 0.94
CCDC43-204ENST00000588687 CFAP54Q96N23 3096 aa20.93■□□□□ 0.94
CCDC43-204ENST00000588687 DENND3A2RUS2 1198 aa20.92■□□□□ 0.94
CCDC43-204ENST00000588687 PPFIA3O75145 1194 aa20.92■□□□□ 0.94
CCDC43-204ENST00000588687 VTNP04004 478 aa20.92■□□□□ 0.94
CCDC43-204ENST00000588687 IBSPP21815 317 aaPredicted RBP20.92■□□□□ 0.94
CCDC43-204ENST00000588687 CRYBB1P53674 252 aaPredicted RBP20.92■□□□□ 0.94
CCDC43-204ENST00000588687 PKN1Q16512 942 aa20.92■□□□□ 0.94
CCDC43-204ENST00000588687 ZNF746Q6NUN9 644 aaPredicted RBP20.92■□□□□ 0.94
CCDC43-204ENST00000588687 BMP8AQ7Z5Y6 402 aa20.92■□□□□ 0.94
CCDC43-204ENST00000588687 BBXQ8WY36 941 aaPredicted RBP20.92■□□□□ 0.94
CCDC43-204ENST00000588687 TYW1Q9NV66 732 aaKnown RBP20.92■□□□□ 0.94
CCDC43-204ENST00000588687 PCDHB12Q9Y5F1 795 aa20.92■□□□□ 0.94
CCDC43-204ENST00000588687 PER2O15055 1255 aa20.91■□□□□ 0.94
CCDC43-204ENST00000588687 GPR182O15218 404 aa20.91■□□□□ 0.94
CCDC43-204ENST00000588687 EDIL3O43854 480 aa20.91■□□□□ 0.94
CCDC43-204ENST00000588687 ADD1P35611 737 aaKnown RBP20.91■□□□□ 0.94
CCDC43-204ENST00000588687 ZNF76P36508 570 aa20.91■□□□□ 0.94
CCDC43-204ENST00000588687 SETQ01105 290 aaPredicted RBP20.91■□□□□ 0.94
CCDC43-204ENST00000588687 TRIM67Q6ZTA4 783 aa20.91■□□□□ 0.94
CCDC43-204ENST00000588687 MFSD14AQ96MC6 490 aa20.91■□□□□ 0.94
CCDC43-204ENST00000588687 ZNF577Q9BSK1 485 aa20.91■□□□□ 0.94
CCDC43-204ENST00000588687 ELAC1Q9H777 363 aaKnown RBP20.91■□□□□ 0.94
CCDC43-204ENST00000588687 TLE6Q9H808 572 aa20.91■□□□□ 0.94
CCDC43-204ENST00000588687 CACNA1HO95180 2353 aa20.9■□□□□ 0.94
CCDC43-204ENST00000588687 CLCN3P51790 818 aa20.9■□□□□ 0.94
CCDC43-204ENST00000588687 LRRC55Q6ZSA7 311 aa20.9■□□□□ 0.94
CCDC43-204ENST00000588687 SMAP1Q8IYB5 467 aaPredicted RBP20.9■□□□□ 0.94
CCDC43-204ENST00000588687 PRSS33Q8NF86 280 aa20.9■□□□□ 0.94
CCDC43-204ENST00000588687 CDCA3Q99618 268 aaPredicted RBP20.9■□□□□ 0.94
CCDC43-204ENST00000588687 PHF7Q9BWX1 381 aaPredicted RBP20.9■□□□□ 0.94
CCDC43-204ENST00000588687 ADAMTS10Q9H324 1103 aa20.9■□□□□ 0.94
CCDC43-204ENST00000588687 AAASQ9NRG9 546 aa20.9■□□□□ 0.94
CCDC43-204ENST00000588687 TBC1D22BQ9NU19 505 aa20.9■□□□□ 0.94
CCDC43-204ENST00000588687 LZTS1Q9Y250 596 aa20.9■□□□□ 0.94
CCDC43-204ENST00000588687 TMEM221A6NGB7 291 aa20.89■□□□□ 0.93
CCDC43-204ENST00000588687 M0R296 226 aa20.89■□□□□ 0.93
CCDC43-204ENST00000588687 ZNF862O60290 1169 aa20.89■□□□□ 0.93
CCDC43-204ENST00000588687 ATF7P17544 494 aaPredicted RBP20.89■□□□□ 0.93
CCDC43-204ENST00000588687 CIITAP33076 1130 aa20.89■□□□□ 0.93
CCDC43-204ENST00000588687 ZXDAP98168 799 aa20.89■□□□□ 0.93
CCDC43-204ENST00000588687 ODR4Q5SWX8 454 aa20.89■□□□□ 0.93
CCDC43-204ENST00000588687 TMEM184AQ6ZMB5 413 aa20.89■□□□□ 0.93
CCDC43-204ENST00000588687 REXO1Q8N1G1 1221 aaKnown RBP20.89■□□□□ 0.93
CCDC43-204ENST00000588687 RASGRP4Q8TDF6 673 aa20.89■□□□□ 0.93
CCDC43-204ENST00000588687 KCNB2Q92953 911 aa20.89■□□□□ 0.93
CCDC43-204ENST00000588687 CASD1Q96PB1 797 aa20.89■□□□□ 0.93
CCDC43-204ENST00000588687 S1PR5Q9H228 398 aa20.89■□□□□ 0.93
CCDC43-204ENST00000588687 VPS13AQ96RL7 3174 aa20.89■□□□□ 0.93
CCDC43-204ENST00000588687 CPA1P15085 419 aa20.88■□□□□ 0.93
CCDC43-204ENST00000588687 LAG3P18627 525 aa20.88■□□□□ 0.93
CCDC43-204ENST00000588687 METAP2P50579 478 aaKnown RBP eCLIP20.88■□□□□ 0.93
CCDC43-204ENST00000588687 PLCB3Q01970 1234 aa20.88■□□□□ 0.93
CCDC43-204ENST00000588687 APOBRQ0VD83 1088 aa20.88■□□□□ 0.93
CCDC43-204ENST00000588687 THNSL1Q8IYQ7 743 aa20.88■□□□□ 0.93
CCDC43-204ENST00000588687 MRPS27Q92552 414 aaKnown RBP20.88■□□□□ 0.93
CCDC43-204ENST00000588687 TMEM117Q9H0C3 514 aa20.88■□□□□ 0.93
CCDC43-204ENST00000588687 ATP6V0A4Q9HBG4 840 aa20.88■□□□□ 0.93
CCDC43-204ENST00000588687 RNF216Q9NWF9 866 aaPredicted RBP20.88■□□□□ 0.93
CCDC43-204ENST00000588687 PCDHA10Q9Y5I2 948 aa20.88■□□□□ 0.93
CCDC43-204ENST00000588687 FSD2A1L4K1 749 aa20.87■□□□□ 0.93
CCDC43-204ENST00000588687 KRT32Q14532 448 aa20.87■□□□□ 0.93
CCDC43-204ENST00000588687 SPOUT1Q5T280 376 aaKnown RBP20.87■□□□□ 0.93
CCDC43-204ENST00000588687 IER5LQ5T953 404 aa20.87■□□□□ 0.93
CCDC43-204ENST00000588687 PDE12Q6L8Q7 609 aaKnown RBP20.87■□□□□ 0.93
CCDC43-204ENST00000588687 SYCE2Q6PIF2 218 aa20.87■□□□□ 0.93
CCDC43-204ENST00000588687 CKAP2LQ8IYA6 745 aa20.87■□□□□ 0.93
CCDC43-204ENST00000588687 METTL13Q8N6R0 699 aa20.87■□□□□ 0.93
CCDC43-204ENST00000588687 ASIC4Q96FT7 647 aa20.87■□□□□ 0.93
CCDC43-204ENST00000588687 GABBR1Q9UBS5 961 aa20.87■□□□□ 0.93
CCDC43-204ENST00000588687 HIDE1A8MVS5 230 aa20.86■□□□□ 0.93
CCDC43-204ENST00000588687 PSAPP07602 524 aa20.86■□□□□ 0.93
CCDC43-204ENST00000588687 PBX3P40426 434 aa20.86■□□□□ 0.93
CCDC43-204ENST00000588687 NTRK3Q16288 839 aa20.86■□□□□ 0.93
CCDC43-204ENST00000588687 UGCGQ16739 394 aa20.86■□□□□ 0.93
CCDC43-204ENST00000588687 PRR16Q569H4 304 aa20.86■□□□□ 0.93
CCDC43-204ENST00000588687 CLLU1OSQ5K130 101 aa20.86■□□□□ 0.93
CCDC43-204ENST00000588687 PLPP4Q5VZY2 271 aa20.86■□□□□ 0.93
CCDC43-204ENST00000588687 LRRC71Q8N4P6 559 aa20.86■□□□□ 0.93
CCDC43-204ENST00000588687 MICAL1Q8TDZ2 1067 aa20.86■□□□□ 0.93
CCDC43-204ENST00000588687 PHOX2BQ99453 314 aa20.86■□□□□ 0.93
CCDC43-204ENST00000588687 CEP131Q9UPN4 1083 aa20.86■□□□□ 0.93
CCDC43-204ENST00000588687 MAGEB2O15479 319 aa20.85■□□□□ 0.93
CCDC43-204ENST00000588687 PRPF3O43395 683 aaKnown RBP20.85■□□□□ 0.93
CCDC43-204ENST00000588687 HMGB1P09429 215 aaKnown RBP20.85■□□□□ 0.93
CCDC43-204ENST00000588687 NLRP11P59045 1033 aaKnown RBP20.85■□□□□ 0.93
CCDC43-204ENST00000588687 MCTP2Q6DN12 878 aa20.85■□□□□ 0.93
CCDC43-204ENST00000588687 ANKRD54Q6NXT1 300 aa20.85■□□□□ 0.93
CCDC43-204ENST00000588687 KCNT2Q6UVM3 1135 aa20.85■□□□□ 0.93
CCDC43-204ENST00000588687 TRMT1LQ7Z2T5 733 aaKnown RBP20.85■□□□□ 0.93
CCDC43-204ENST00000588687 ZNF598Q86UK7 904 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms